Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.18□□□□□ -1.9
CISHQ9NSE2 AC037471.2-201ENST00000564941 598 ntBASIC3.18□□□□□ -1.9
CISHQ9NSE2 MIR4325-201ENST00000583049 90 ntBASIC3.18□□□□□ -1.9
CISHQ9NSE2 ATP5A1P2-202ENST00000616464 443 ntBASIC3.18□□□□□ -1.9
CISHQ9NSE2 uc_338.9-201ENST00000617424 182 ntBASIC3.18□□□□□ -1.9
CISHQ9NSE2 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.18□□□□□ -1.9
CISHQ9NSE2 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CISHQ9NSE2 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
CISHQ9NSE2 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.18□□□□□ -1.9
CISHQ9NSE2 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
CISHQ9NSE2 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.18□□□□□ -1.9
CISHQ9NSE2 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CISHQ9NSE2 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.18□□□□□ -1.9
CISHQ9NSE2 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.18□□□□□ -1.9
CISHQ9NSE2 AL353743.1-202ENST00000431724 1695 ntBASIC3.17□□□□□ -1.9
CISHQ9NSE2 SNORA9-201ENST00000384215 133 ntBASIC3.17□□□□□ -1.9
CISHQ9NSE2 MIR491-201ENST00000384877 84 ntBASIC3.17□□□□□ -1.9
CISHQ9NSE2 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3.17□□□□□ -1.9
CISHQ9NSE2 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.17□□□□□ -1.9
CISHQ9NSE2 PRELID3BP11-201ENST00000414230 479 ntBASIC3.17□□□□□ -1.9
CISHQ9NSE2 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC3.17□□□□□ -1.9
CISHQ9NSE2 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.17□□□□□ -1.9
CISHQ9NSE2 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC3.17□□□□□ -1.9
CISHQ9NSE2 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.17□□□□□ -1.9
CISHQ9NSE2 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CISHQ9NSE2 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.17□□□□□ -1.9
CISHQ9NSE2 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC3.17□□□□□ -1.9
CISHQ9NSE2 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.17□□□□□ -1.9
CISHQ9NSE2 MTCYBP14-201ENST00000457471 715 ntBASIC3.17□□□□□ -1.9
CISHQ9NSE2 RPL23AP62-201ENST00000463396 453 ntBASIC3.17□□□□□ -1.9
CISHQ9NSE2 AC092451.1-201ENST00000480211 153 ntBASIC3.17□□□□□ -1.9
CISHQ9NSE2 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.17□□□□□ -1.9
CISHQ9NSE2 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC3.17□□□□□ -1.9
CISHQ9NSE2 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC3.17□□□□□ -1.9
CISHQ9NSE2 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC3.17□□□□□ -1.9
CISHQ9NSE2 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.17□□□□□ -1.9
CISHQ9NSE2 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.17□□□□□ -1.9
CISHQ9NSE2 RNU6-319P-201ENST00000516025 108 ntBASIC3.17□□□□□ -1.9
CISHQ9NSE2 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.17□□□□□ -1.9
CISHQ9NSE2 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.17□□□□□ -1.9
CISHQ9NSE2 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CISHQ9NSE2 AL121594.4-201ENST00000556211 1196 ntBASIC3.17□□□□□ -1.9
CISHQ9NSE2 H3F3AP1-201ENST00000559984 334 ntBASIC3.17□□□□□ -1.9
CISHQ9NSE2 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC3.17□□□□□ -1.9
CISHQ9NSE2 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.17□□□□□ -1.9
CISHQ9NSE2 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CISHQ9NSE2 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CISHQ9NSE2 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CISHQ9NSE2 AL162274.2-201ENST00000614406 332 ntBASIC3.17□□□□□ -1.9
CISHQ9NSE2 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.17□□□□□ -1.9
CISHQ9NSE2 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.17□□□□□ -1.9
CISHQ9NSE2 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CISHQ9NSE2 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.17□□□□□ -1.9
CISHQ9NSE2 AC093831.2-201ENST00000624393 3427 ntBASIC3.16□□□□□ -1.9
CISHQ9NSE2 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
CISHQ9NSE2 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CISHQ9NSE2 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CISHQ9NSE2 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CISHQ9NSE2 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CISHQ9NSE2 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CISHQ9NSE2 RPL31P1-201ENST00000398116 372 ntBASIC3.16□□□□□ -1.9
CISHQ9NSE2 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC3.16□□□□□ -1.9
CISHQ9NSE2 AL445528.1-201ENST00000426330 420 ntBASIC3.16□□□□□ -1.9
CISHQ9NSE2 AC245517.2-201ENST00000442890 346 ntBASIC3.16□□□□□ -1.9
CISHQ9NSE2 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.16□□□□□ -1.9
CISHQ9NSE2 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.16□□□□□ -1.9
CISHQ9NSE2 SNRPGP3-201ENST00000469405 227 ntBASIC3.16□□□□□ -1.9
CISHQ9NSE2 RPS17P11-201ENST00000474297 293 ntBASIC3.16□□□□□ -1.9
CISHQ9NSE2 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.16□□□□□ -1.9
CISHQ9NSE2 MTCO1P30-201ENST00000515244 580 ntBASIC3.16□□□□□ -1.9
CISHQ9NSE2 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.16□□□□□ -1.9
CISHQ9NSE2 OR5G4P-201ENST00000525251 760 ntBASIC3.16□□□□□ -1.9
CISHQ9NSE2 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.16□□□□□ -1.9
CISHQ9NSE2 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.16□□□□□ -1.9
CISHQ9NSE2 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.16□□□□□ -1.9
CISHQ9NSE2 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC3.16□□□□□ -1.9
CISHQ9NSE2 AC012213.4-201ENST00000606457 354 ntBASIC3.16□□□□□ -1.9
CISHQ9NSE2 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CISHQ9NSE2 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
CISHQ9NSE2 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.15□□□□□ -1.9
CISHQ9NSE2 AC093908.1-201ENST00000623125 8092 ntBASIC3.15□□□□□ -1.9
CISHQ9NSE2 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
CISHQ9NSE2 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
CISHQ9NSE2 RNA5SP167-201ENST00000365461 116 ntBASIC3.15□□□□□ -1.91
CISHQ9NSE2 SNORA11C-201ENST00000408532 129 ntBASIC3.15□□□□□ -1.91
CISHQ9NSE2 RPL37P4-201ENST00000448908 268 ntBASIC3.15□□□□□ -1.91
CISHQ9NSE2 OR6C72P-201ENST00000451403 892 ntBASIC3.15□□□□□ -1.91
CISHQ9NSE2 AC078817.1-201ENST00000492623 435 ntBASIC3.15□□□□□ -1.91
CISHQ9NSE2 PANCR-201ENST00000503456 493 ntTSL 5 BASIC3.15□□□□□ -1.91
CISHQ9NSE2 OR5H4P-201ENST00000510851 923 ntBASIC3.15□□□□□ -1.91
CISHQ9NSE2 RNU4-18P-201ENST00000516751 149 ntBASIC3.15□□□□□ -1.91
CISHQ9NSE2 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.15□□□□□ -1.91
CISHQ9NSE2 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.15□□□□□ -1.91
CISHQ9NSE2 MIR3200-201ENST00000580767 85 ntBASIC3.15□□□□□ -1.91
CISHQ9NSE2 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.15□□□□□ -1.91
CISHQ9NSE2 AC015871.2-201ENST00000603605 948 ntBASIC3.15□□□□□ -1.91
CISHQ9NSE2 AP003117.2-201ENST00000606010 545 ntBASIC3.15□□□□□ -1.91
CISHQ9NSE2 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.15□□□□□ -1.91
CISHQ9NSE2 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.15□□□□□ -1.91
CISHQ9NSE2 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms