Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 AC005412.1-201ENST00000580812 1049 ntBASIC3.89□□□□□ -1.79
HPS4Q9NQG7 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.89□□□□□ -1.79
HPS4Q9NQG7 AC008687.2-201ENST00000597865 520 ntBASIC3.89□□□□□ -1.79
HPS4Q9NQG7 MRPS35P3-201ENST00000603189 709 ntBASIC3.89□□□□□ -1.79
HPS4Q9NQG7 AP002906.1-201ENST00000603405 233 ntBASIC3.89□□□□□ -1.79
HPS4Q9NQG7 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.89□□□□□ -1.79
HPS4Q9NQG7 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.89□□□□□ -1.79
HPS4Q9NQG7 AC079684.1-201ENST00000621405 437 ntBASIC3.89□□□□□ -1.79
HPS4Q9NQG7 AL356118.1-201ENST00000635272 1078 ntBASIC3.89□□□□□ -1.79
HPS4Q9NQG7 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.89□□□□□ -1.79
HPS4Q9NQG7 AC119674.1-207ENST00000641355 633 ntBASIC3.89□□□□□ -1.79
HPS4Q9NQG7 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HPS4Q9NQG7 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HPS4Q9NQG7 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HPS4Q9NQG7 SEPT7P7-201ENST00000420492 1301 ntBASIC3.89□□□□□ -1.79
HPS4Q9NQG7 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.89□□□□□ -1.79
HPS4Q9NQG7 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
HPS4Q9NQG7 AC025263.3-201ENST00000622965 1396 ntBASIC3.89□□□□□ -1.79
HPS4Q9NQG7 NCAPGP1-201ENST00000505112 1814 ntBASIC3.88□□□□□ -1.79
HPS4Q9NQG7 USP8P1-201ENST00000494673 3183 ntBASIC3.88□□□□□ -1.79
HPS4Q9NQG7 RNU6-468P-201ENST00000384003 109 ntBASIC3.88□□□□□ -1.79
HPS4Q9NQG7 U6.112-201ENST00000384129 70 ntBASIC3.88□□□□□ -1.79
HPS4Q9NQG7 RNU6-207P-201ENST00000384137 107 ntBASIC3.88□□□□□ -1.79
HPS4Q9NQG7 RNU6-328P-201ENST00000390887 106 ntBASIC3.88□□□□□ -1.79
HPS4Q9NQG7 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
HPS4Q9NQG7 ATP5A1P2-201ENST00000412323 255 ntBASIC3.88□□□□□ -1.79
HPS4Q9NQG7 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.88□□□□□ -1.79
HPS4Q9NQG7 AC245052.5-201ENST00000416320 649 ntBASIC3.88□□□□□ -1.79
HPS4Q9NQG7 NUP35P2-201ENST00000416748 943 ntBASIC3.88□□□□□ -1.79
HPS4Q9NQG7 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.88□□□□□ -1.79
HPS4Q9NQG7 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.88□□□□□ -1.79
HPS4Q9NQG7 AC241520.1-201ENST00000422654 1099 ntBASIC3.88□□□□□ -1.79
HPS4Q9NQG7 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.88□□□□□ -1.79
HPS4Q9NQG7 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.88□□□□□ -1.79
HPS4Q9NQG7 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.88□□□□□ -1.79
HPS4Q9NQG7 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.88□□□□□ -1.79
HPS4Q9NQG7 AC096638.2-201ENST00000434965 711 ntBASIC3.88□□□□□ -1.79
HPS4Q9NQG7 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.88□□□□□ -1.79
HPS4Q9NQG7 OR51B8P-201ENST00000449892 769 ntBASIC3.88□□□□□ -1.79
HPS4Q9NQG7 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.88□□□□□ -1.79
HPS4Q9NQG7 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.88□□□□□ -1.79
HPS4Q9NQG7 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.88□□□□□ -1.79
HPS4Q9NQG7 RPL23AP62-201ENST00000463396 453 ntBASIC3.88□□□□□ -1.79
HPS4Q9NQG7 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.88□□□□□ -1.79
HPS4Q9NQG7 AC005726.1-201ENST00000494679 427 ntBASIC3.88□□□□□ -1.79
HPS4Q9NQG7 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.88□□□□□ -1.79
HPS4Q9NQG7 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HPS4Q9NQG7 AC005798.1-201ENST00000513715 387 ntBASIC3.88□□□□□ -1.79
HPS4Q9NQG7 MTCO3P27-201ENST00000514397 196 ntBASIC3.88□□□□□ -1.79
HPS4Q9NQG7 RNU6-416P-201ENST00000516265 103 ntBASIC3.88□□□□□ -1.79
HPS4Q9NQG7 IGKV2-23-201ENST00000518729 323 ntBASIC3.88□□□□□ -1.79
HPS4Q9NQG7 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.88□□□□□ -1.79
HPS4Q9NQG7 IGJP1-201ENST00000522682 475 ntBASIC3.88□□□□□ -1.79
HPS4Q9NQG7 AF279873.1-201ENST00000523393 313 ntBASIC3.88□□□□□ -1.79
HPS4Q9NQG7 GNRHR2P1-201ENST00000555315 631 ntBASIC3.88□□□□□ -1.79
HPS4Q9NQG7 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.88□□□□□ -1.79
HPS4Q9NQG7 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.88□□□□□ -1.79
HPS4Q9NQG7 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.88□□□□□ -1.79
HPS4Q9NQG7 AC133794.1-201ENST00000602731 914 ntBASIC3.88□□□□□ -1.79
HPS4Q9NQG7 SNORA62.6-201ENST00000606322 83 ntBASIC3.88□□□□□ -1.79
HPS4Q9NQG7 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.88□□□□□ -1.79
HPS4Q9NQG7 AC092354.2-201ENST00000607786 514 ntBASIC3.88□□□□□ -1.79
HPS4Q9NQG7 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.88□□□□□ -1.79
HPS4Q9NQG7 AC090425.2-201ENST00000608818 501 ntBASIC3.88□□□□□ -1.79
HPS4Q9NQG7 AL591424.2-201ENST00000617023 128 ntBASIC3.88□□□□□ -1.79
HPS4Q9NQG7 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.88□□□□□ -1.79
HPS4Q9NQG7 AC048347.1-201ENST00000624621 427 ntBASIC3.88□□□□□ -1.79
HPS4Q9NQG7 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.88□□□□□ -1.79
HPS4Q9NQG7 MTCO1P12-201ENST00000414273 1543 ntBASIC3.88□□□□□ -1.79
HPS4Q9NQG7 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
HPS4Q9NQG7 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HPS4Q9NQG7 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
HPS4Q9NQG7 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HPS4Q9NQG7 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HPS4Q9NQG7 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.87□□□□□ -1.79
HPS4Q9NQG7 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.87□□□□□ -1.79
HPS4Q9NQG7 HSPA8P1-201ENST00000425843 1833 ntBASIC3.87□□□□□ -1.79
HPS4Q9NQG7 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
HPS4Q9NQG7 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC3.87□□□□□ -1.79
HPS4Q9NQG7 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.87□□□□□ -1.79
HPS4Q9NQG7 RPL31P2-201ENST00000413849 377 ntBASIC3.87□□□□□ -1.79
HPS4Q9NQG7 EI24P1-201ENST00000416584 867 ntBASIC3.87□□□□□ -1.79
HPS4Q9NQG7 PAICSP7-201ENST00000419829 962 ntBASIC3.87□□□□□ -1.79
HPS4Q9NQG7 AL365396.1-201ENST00000430854 671 ntBASIC3.87□□□□□ -1.79
HPS4Q9NQG7 AL159987.2-201ENST00000432754 307 ntBASIC3.87□□□□□ -1.79
HPS4Q9NQG7 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.87□□□□□ -1.79
HPS4Q9NQG7 YWHAZP8-201ENST00000436935 731 ntBASIC3.87□□□□□ -1.79
HPS4Q9NQG7 SETP5-201ENST00000437270 562 ntBASIC3.87□□□□□ -1.79
HPS4Q9NQG7 SNORA71B-202ENST00000439232 272 ntBASIC3.87□□□□□ -1.79
HPS4Q9NQG7 SETD6P1-201ENST00000444575 317 ntBASIC3.87□□□□□ -1.79
HPS4Q9NQG7 RPS3AP46-201ENST00000448352 682 ntBASIC3.87□□□□□ -1.79
HPS4Q9NQG7 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.87□□□□□ -1.79
HPS4Q9NQG7 CDC42P1-201ENST00000456658 548 ntBASIC3.87□□□□□ -1.79
HPS4Q9NQG7 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.87□□□□□ -1.79
HPS4Q9NQG7 RPS17P11-201ENST00000474297 293 ntBASIC3.87□□□□□ -1.79
HPS4Q9NQG7 RPL31P13-201ENST00000484151 370 ntBASIC3.87□□□□□ -1.79
HPS4Q9NQG7 NIPA2P2-201ENST00000496376 1083 ntBASIC3.87□□□□□ -1.79
HPS4Q9NQG7 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.87□□□□□ -1.79
HPS4Q9NQG7 AC016550.1-201ENST00000505348 785 ntBASIC3.87□□□□□ -1.79
HPS4Q9NQG7 NAMPTP2-201ENST00000505629 1115 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms