Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC3.94□□□□□ -1.78
SIX2Q9NPC8 AC011979.1-201ENST00000472300 483 ntBASIC3.94□□□□□ -1.78
SIX2Q9NPC8 AC084357.1-201ENST00000473404 255 ntBASIC3.94□□□□□ -1.78
SIX2Q9NPC8 GAPDHP36-201ENST00000480688 918 ntBASIC3.94□□□□□ -1.78
SIX2Q9NPC8 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SIX2Q9NPC8 AC026402.1-201ENST00000513642 170 ntBASIC3.94□□□□□ -1.78
SIX2Q9NPC8 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.94□□□□□ -1.78
SIX2Q9NPC8 RNU6-347P-201ENST00000516658 105 ntBASIC3.94□□□□□ -1.78
SIX2Q9NPC8 IGHVIII-38-1-201ENST00000521454 282 ntBASIC3.94□□□□□ -1.78
SIX2Q9NPC8 AC008562.1-201ENST00000521763 330 ntBASIC3.94□□□□□ -1.78
SIX2Q9NPC8 COX6B1P6-201ENST00000522347 255 ntBASIC3.94□□□□□ -1.78
SIX2Q9NPC8 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.94□□□□□ -1.78
SIX2Q9NPC8 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.94□□□□□ -1.78
SIX2Q9NPC8 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.94□□□□□ -1.78
SIX2Q9NPC8 HSPE1P5-201ENST00000561489 272 ntBASIC3.94□□□□□ -1.78
SIX2Q9NPC8 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC3.94□□□□□ -1.78
SIX2Q9NPC8 AGGF1P6-201ENST00000569213 976 ntBASIC3.94□□□□□ -1.78
SIX2Q9NPC8 BPTFP1-201ENST00000579209 492 ntBASIC3.94□□□□□ -1.78
SIX2Q9NPC8 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.94□□□□□ -1.78
SIX2Q9NPC8 AC023813.4-201ENST00000607580 580 ntBASIC3.94□□□□□ -1.78
SIX2Q9NPC8 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.94□□□□□ -1.78
SIX2Q9NPC8 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.94□□□□□ -1.78
SIX2Q9NPC8 AC068724.3-201ENST00000625906 87 ntBASIC3.94□□□□□ -1.78
SIX2Q9NPC8 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC3.94□□□□□ -1.78
SIX2Q9NPC8 MIR1322-201ENST00000638013 71 ntBASIC3.94□□□□□ -1.78
SIX2Q9NPC8 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SIX2Q9NPC8 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
SIX2Q9NPC8 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.94□□□□□ -1.78
SIX2Q9NPC8 AC104454.1-201ENST00000421341 1401 ntBASIC3.94□□□□□ -1.78
SIX2Q9NPC8 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.94□□□□□ -1.78
SIX2Q9NPC8 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SIX2Q9NPC8 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SIX2Q9NPC8 ASNSP1-204ENST00000641977 1664 ntBASIC3.94□□□□□ -1.78
SIX2Q9NPC8 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
SIX2Q9NPC8 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
SIX2Q9NPC8 AP004289.2-201ENST00000444413 1457 ntBASIC3.93□□□□□ -1.78
SIX2Q9NPC8 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
SIX2Q9NPC8 AC119744.1-201ENST00000454746 1715 ntBASIC3.93□□□□□ -1.78
SIX2Q9NPC8 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SIX2Q9NPC8 FAM133CP-201ENST00000332869 704 ntBASIC3.93□□□□□ -1.78
SIX2Q9NPC8 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SIX2Q9NPC8 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SIX2Q9NPC8 RNU6-304P-201ENST00000364855 107 ntBASIC3.93□□□□□ -1.78
SIX2Q9NPC8 RNU6-619P-201ENST00000365146 108 ntBASIC3.93□□□□□ -1.78
SIX2Q9NPC8 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SIX2Q9NPC8 BMS1P3-201ENST00000372011 932 ntBASIC3.93□□□□□ -1.78
SIX2Q9NPC8 RNU6-628P-201ENST00000410675 107 ntBASIC3.93□□□□□ -1.78
SIX2Q9NPC8 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.93□□□□□ -1.78
SIX2Q9NPC8 OR51A3P-201ENST00000413596 924 ntBASIC3.93□□□□□ -1.78
SIX2Q9NPC8 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
SIX2Q9NPC8 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.93□□□□□ -1.78
SIX2Q9NPC8 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.93□□□□□ -1.78
SIX2Q9NPC8 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.93□□□□□ -1.78
SIX2Q9NPC8 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.93□□□□□ -1.78
SIX2Q9NPC8 AC091390.1-201ENST00000433904 331 ntBASIC3.93□□□□□ -1.78
SIX2Q9NPC8 OR6K5P-201ENST00000447050 945 ntBASIC3.93□□□□□ -1.78
SIX2Q9NPC8 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC3.93□□□□□ -1.78
SIX2Q9NPC8 NECAP1P2-201ENST00000455668 727 ntBASIC3.93□□□□□ -1.78
SIX2Q9NPC8 CCDC75P1-201ENST00000469247 791 ntBASIC3.93□□□□□ -1.78
SIX2Q9NPC8 AC006511.1-201ENST00000470614 315 ntBASIC3.93□□□□□ -1.78
SIX2Q9NPC8 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.93□□□□□ -1.78
SIX2Q9NPC8 AC015724.1-201ENST00000478577 156 ntBASIC3.93□□□□□ -1.78
SIX2Q9NPC8 AC093267.1-201ENST00000489176 961 ntBASIC3.93□□□□□ -1.78
SIX2Q9NPC8 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.93□□□□□ -1.78
SIX2Q9NPC8 VWA8P1-201ENST00000510889 176 ntBASIC3.93□□□□□ -1.78
SIX2Q9NPC8 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.93□□□□□ -1.78
SIX2Q9NPC8 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.93□□□□□ -1.78
SIX2Q9NPC8 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.93□□□□□ -1.78
SIX2Q9NPC8 FABP5P12-201ENST00000515543 389 ntBASIC3.93□□□□□ -1.78
SIX2Q9NPC8 RN7SKP283-201ENST00000517197 270 ntBASIC3.93□□□□□ -1.78
SIX2Q9NPC8 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC3.93□□□□□ -1.78
SIX2Q9NPC8 OR4C2P-201ENST00000530855 1064 ntBASIC3.93□□□□□ -1.78
SIX2Q9NPC8 AC007834.2-201ENST00000536310 343 ntBASIC3.93□□□□□ -1.78
SIX2Q9NPC8 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.93□□□□□ -1.78
SIX2Q9NPC8 AL354943.1-201ENST00000572103 781 ntBASIC3.93□□□□□ -1.78
SIX2Q9NPC8 VN1R84P-201ENST00000593697 235 ntBASIC3.93□□□□□ -1.78
SIX2Q9NPC8 AC119501.1-201ENST00000603646 475 ntBASIC3.93□□□□□ -1.78
SIX2Q9NPC8 AC105227.2-201ENST00000615075 605 ntBASIC3.93□□□□□ -1.78
SIX2Q9NPC8 CCL14-204ENST00000622526 472 ntTSL 3 BASIC3.93□□□□□ -1.78
SIX2Q9NPC8 AL732372.2-225ENST00000642124 456 ntBASIC3.93□□□□□ -1.78
SIX2Q9NPC8 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.93□□□□□ -1.78
SIX2Q9NPC8 MAPK10-373ENST00000641983 6772 ntBASIC3.93□□□□□ -1.78
SIX2Q9NPC8 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
SIX2Q9NPC8 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SIX2Q9NPC8 MFSD8-236ENST00000641509 4050 ntBASIC3.93□□□□□ -1.78
SIX2Q9NPC8 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SIX2Q9NPC8 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SIX2Q9NPC8 OR10J6P-201ENST00000289731 930 ntBASIC3.92□□□□□ -1.78
SIX2Q9NPC8 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
SIX2Q9NPC8 OR4A15-201ENST00000314706 1035 ntBASIC3.92□□□□□ -1.78
SIX2Q9NPC8 RN7SKP280-201ENST00000364196 304 ntBASIC3.92□□□□□ -1.78
SIX2Q9NPC8 RNU4-40P-201ENST00000364351 143 ntBASIC3.92□□□□□ -1.78
SIX2Q9NPC8 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
SIX2Q9NPC8 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
SIX2Q9NPC8 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
SIX2Q9NPC8 SFR1P1-201ENST00000403720 688 ntBASIC3.92□□□□□ -1.78
SIX2Q9NPC8 RN7SKP156-201ENST00000410308 342 ntBASIC3.92□□□□□ -1.78
SIX2Q9NPC8 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SIX2Q9NPC8 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.92□□□□□ -1.78
SIX2Q9NPC8 TRGV6-201ENST00000417928 299 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms