Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AC106028.5-201ENST00000610332 395 ntBASIC4.59□□□□□ -1.67
USP29Q9HBJ7 MIR6716-201ENST00000613413 80 ntBASIC4.59□□□□□ -1.67
USP29Q9HBJ7 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
USP29Q9HBJ7 AC009509.4-201ENST00000619202 509 ntBASIC4.59□□□□□ -1.67
USP29Q9HBJ7 AC009878.1-201ENST00000621819 340 ntBASIC4.59□□□□□ -1.67
USP29Q9HBJ7 AL049536.1-201ENST00000625043 744 ntBASIC4.59□□□□□ -1.67
USP29Q9HBJ7 AC084035.1-201ENST00000634543 607 ntBASIC4.59□□□□□ -1.67
USP29Q9HBJ7 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.59□□□□□ -1.67
USP29Q9HBJ7 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
USP29Q9HBJ7 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
USP29Q9HBJ7 MTND5P24-201ENST00000438892 1767 ntBASIC4.58□□□□□ -1.68
USP29Q9HBJ7 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.58□□□□□ -1.68
USP29Q9HBJ7 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
USP29Q9HBJ7 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
USP29Q9HBJ7 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.58□□□□□ -1.68
USP29Q9HBJ7 Y_RNA.302-201ENST00000364997 102 ntBASIC4.58□□□□□ -1.68
USP29Q9HBJ7 Y_RNA.559-201ENST00000384686 107 ntBASIC4.58□□□□□ -1.68
USP29Q9HBJ7 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.58□□□□□ -1.68
USP29Q9HBJ7 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.58□□□□□ -1.68
USP29Q9HBJ7 PRRC2CP1-201ENST00000404428 159 ntBASIC4.58□□□□□ -1.68
USP29Q9HBJ7 RNU4-25P-201ENST00000410569 230 ntBASIC4.58□□□□□ -1.68
USP29Q9HBJ7 SNORA74C-2-201ENST00000411179 201 ntBASIC4.58□□□□□ -1.68
USP29Q9HBJ7 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.58□□□□□ -1.68
USP29Q9HBJ7 USP9YP33-201ENST00000412220 421 ntBASIC4.58□□□□□ -1.68
USP29Q9HBJ7 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
USP29Q9HBJ7 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.58□□□□□ -1.68
USP29Q9HBJ7 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.58□□□□□ -1.68
USP29Q9HBJ7 MED14P1-201ENST00000430517 648 ntBASIC4.58□□□□□ -1.68
USP29Q9HBJ7 RPEP2-201ENST00000432149 701 ntBASIC4.58□□□□□ -1.68
USP29Q9HBJ7 RPL37P1-201ENST00000432310 284 ntBASIC4.58□□□□□ -1.68
USP29Q9HBJ7 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC4.58□□□□□ -1.68
USP29Q9HBJ7 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC4.58□□□□□ -1.68
USP29Q9HBJ7 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.58□□□□□ -1.68
USP29Q9HBJ7 USP9YP35-201ENST00000435696 412 ntBASIC4.58□□□□□ -1.68
USP29Q9HBJ7 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.58□□□□□ -1.68
USP29Q9HBJ7 RPS24P1-201ENST00000438550 371 ntBASIC4.58□□□□□ -1.68
USP29Q9HBJ7 AC069285.2-201ENST00000440210 275 ntBASIC4.58□□□□□ -1.68
USP29Q9HBJ7 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.58□□□□□ -1.68
USP29Q9HBJ7 MTND1P30-201ENST00000441241 901 ntBASIC4.58□□□□□ -1.68
USP29Q9HBJ7 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC4.58□□□□□ -1.68
USP29Q9HBJ7 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC4.58□□□□□ -1.68
USP29Q9HBJ7 ZNF114P1-201ENST00000453500 292 ntBASIC4.58□□□□□ -1.68
USP29Q9HBJ7 MTND6P6-201ENST00000478031 263 ntBASIC4.58□□□□□ -1.68
USP29Q9HBJ7 AC004069.2-201ENST00000505438 1114 ntBASIC4.58□□□□□ -1.68
USP29Q9HBJ7 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.58□□□□□ -1.68
USP29Q9HBJ7 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
USP29Q9HBJ7 AC091965.2-201ENST00000512324 613 ntBASIC4.58□□□□□ -1.68
USP29Q9HBJ7 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC4.58□□□□□ -1.68
USP29Q9HBJ7 IGLV3-26-201ENST00000520756 302 ntBASIC4.58□□□□□ -1.68
USP29Q9HBJ7 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.58□□□□□ -1.68
USP29Q9HBJ7 AP000827.1-201ENST00000527814 258 ntBASIC4.58□□□□□ -1.68
USP29Q9HBJ7 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.58□□□□□ -1.68
USP29Q9HBJ7 AC006362.1-201ENST00000567392 174 ntBASIC4.58□□□□□ -1.68
USP29Q9HBJ7 MTND6P33-201ENST00000571794 183 ntBASIC4.58□□□□□ -1.68
USP29Q9HBJ7 MIR4716-201ENST00000579628 84 ntBASIC4.58□□□□□ -1.68
USP29Q9HBJ7 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.58□□□□□ -1.68
USP29Q9HBJ7 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.58□□□□□ -1.68
USP29Q9HBJ7 AC068790.6-201ENST00000602558 258 ntBASIC4.58□□□□□ -1.68
USP29Q9HBJ7 AC008782.1-201ENST00000603386 430 ntBASIC4.58□□□□□ -1.68
USP29Q9HBJ7 AC020910.2-201ENST00000603635 610 ntBASIC4.58□□□□□ -1.68
USP29Q9HBJ7 AC080078.2-201ENST00000603766 501 ntBASIC4.58□□□□□ -1.68
USP29Q9HBJ7 AL160290.3-201ENST00000604869 165 ntBASIC4.58□□□□□ -1.68
USP29Q9HBJ7 AL031775.1-201ENST00000607014 887 ntBASIC4.58□□□□□ -1.68
USP29Q9HBJ7 AL391497.1-201ENST00000608671 547 ntBASIC4.58□□□□□ -1.68
USP29Q9HBJ7 AP000254.1-201ENST00000609934 520 ntBASIC4.58□□□□□ -1.68
USP29Q9HBJ7 MLECP1-201ENST00000615893 709 ntBASIC4.58□□□□□ -1.68
USP29Q9HBJ7 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.58□□□□□ -1.68
USP29Q9HBJ7 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
USP29Q9HBJ7 AC018816.2-201ENST00000621460 353 ntBASIC4.58□□□□□ -1.68
USP29Q9HBJ7 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.58□□□□□ -1.68
USP29Q9HBJ7 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
USP29Q9HBJ7 AC018529.3-201ENST00000624212 2254 ntBASIC4.58□□□□□ -1.68
USP29Q9HBJ7 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
USP29Q9HBJ7 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
USP29Q9HBJ7 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
USP29Q9HBJ7 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
USP29Q9HBJ7 AL133243.3-201ENST00000617415 3004 ntBASIC4.58□□□□□ -1.68
USP29Q9HBJ7 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
USP29Q9HBJ7 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.58□□□□□ -1.68
USP29Q9HBJ7 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
USP29Q9HBJ7 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.58□□□□□ -1.68
USP29Q9HBJ7 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
USP29Q9HBJ7 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
USP29Q9HBJ7 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
USP29Q9HBJ7 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
USP29Q9HBJ7 ATP8A2P3-201ENST00000426792 1536 ntBASIC4.57□□□□□ -1.68
USP29Q9HBJ7 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.57□□□□□ -1.68
USP29Q9HBJ7 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.57□□□□□ -1.68
USP29Q9HBJ7 CYP1D1P-201ENST00000416662 1433 ntBASIC4.57□□□□□ -1.68
USP29Q9HBJ7 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.57□□□□□ -1.68
USP29Q9HBJ7 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
USP29Q9HBJ7 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
USP29Q9HBJ7 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
USP29Q9HBJ7 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
USP29Q9HBJ7 AC025125.1-201ENST00000624743 1922 ntBASIC4.57□□□□□ -1.68
USP29Q9HBJ7 AL121657.1-201ENST00000327215 531 ntBASIC4.57□□□□□ -1.68
USP29Q9HBJ7 MIR448-201ENST00000362131 111 ntBASIC4.57□□□□□ -1.68
USP29Q9HBJ7 RNU6-433P-201ENST00000363216 104 ntBASIC4.57□□□□□ -1.68
USP29Q9HBJ7 RNU6-374P-201ENST00000364146 108 ntBASIC4.57□□□□□ -1.68
USP29Q9HBJ7 RNU6-660P-201ENST00000364566 109 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms