Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 SDCBPP2-201ENST00000424643 885 ntBASIC4.34□□□□□ -1.71
UPF2Q9HAU5 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC4.34□□□□□ -1.71
UPF2Q9HAU5 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.34□□□□□ -1.71
UPF2Q9HAU5 AC016712.1-201ENST00000431088 378 ntBASIC4.34□□□□□ -1.71
UPF2Q9HAU5 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.34□□□□□ -1.71
UPF2Q9HAU5 USP9YP24-201ENST00000434374 697 ntBASIC4.34□□□□□ -1.71
UPF2Q9HAU5 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.34□□□□□ -1.71
UPF2Q9HAU5 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.34□□□□□ -1.71
UPF2Q9HAU5 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.34□□□□□ -1.71
UPF2Q9HAU5 USP9YP17-201ENST00000444617 696 ntBASIC4.34□□□□□ -1.71
UPF2Q9HAU5 RNF148-202ENST00000447240 839 ntTSL 2 BASIC4.34□□□□□ -1.71
UPF2Q9HAU5 AL162151.2-201ENST00000448875 158 ntBASIC4.34□□□□□ -1.71
UPF2Q9HAU5 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.34□□□□□ -1.71
UPF2Q9HAU5 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.34□□□□□ -1.71
UPF2Q9HAU5 AC092155.2-201ENST00000454675 477 ntBASIC4.34□□□□□ -1.71
UPF2Q9HAU5 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC4.34□□□□□ -1.71
UPF2Q9HAU5 RNU7-140P-201ENST00000459546 60 ntBASIC4.34□□□□□ -1.71
UPF2Q9HAU5 NAP1L1P3-201ENST00000462291 880 ntBASIC4.34□□□□□ -1.71
UPF2Q9HAU5 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC4.34□□□□□ -1.71
UPF2Q9HAU5 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.34□□□□□ -1.71
UPF2Q9HAU5 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.34□□□□□ -1.71
UPF2Q9HAU5 SCARNA14-201ENST00000516903 136 ntBASIC4.34□□□□□ -1.71
UPF2Q9HAU5 NDUFS5P6-201ENST00000529136 295 ntBASIC4.34□□□□□ -1.71
UPF2Q9HAU5 AC006518.2-201ENST00000542513 940 ntBASIC4.34□□□□□ -1.71
UPF2Q9HAU5 AC084757.1-201ENST00000559987 490 ntBASIC4.34□□□□□ -1.71
UPF2Q9HAU5 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.34□□□□□ -1.71
UPF2Q9HAU5 VN1R84P-201ENST00000593697 235 ntBASIC4.34□□□□□ -1.71
UPF2Q9HAU5 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.34□□□□□ -1.71
UPF2Q9HAU5 AL355816.1-201ENST00000607951 118 ntBASIC4.34□□□□□ -1.71
UPF2Q9HAU5 AC013468.1-201ENST00000608680 598 ntBASIC4.34□□□□□ -1.71
UPF2Q9HAU5 MIR7973-1-201ENST00000614683 76 ntBASIC4.34□□□□□ -1.71
UPF2Q9HAU5 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
UPF2Q9HAU5 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC4.34□□□□□ -1.71
UPF2Q9HAU5 CU459211.1-201ENST00000635667 749 ntBASIC4.34□□□□□ -1.71
UPF2Q9HAU5 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.34□□□□□ -1.71
UPF2Q9HAU5 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
UPF2Q9HAU5 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
UPF2Q9HAU5 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.33□□□□□ -1.72
UPF2Q9HAU5 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC4.33□□□□□ -1.72
UPF2Q9HAU5 METTL21EP-201ENST00000298105 713 ntBASIC4.33□□□□□ -1.72
UPF2Q9HAU5 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
UPF2Q9HAU5 RNU6-236P-201ENST00000363886 106 ntBASIC4.33□□□□□ -1.72
UPF2Q9HAU5 RNU6-353P-201ENST00000364266 108 ntBASIC4.33□□□□□ -1.72
UPF2Q9HAU5 RNU6-317P-201ENST00000384031 107 ntBASIC4.33□□□□□ -1.72
UPF2Q9HAU5 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
UPF2Q9HAU5 RNA5SP107-201ENST00000411358 122 ntBASIC4.33□□□□□ -1.72
UPF2Q9HAU5 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.33□□□□□ -1.72
UPF2Q9HAU5 RPS7P9-201ENST00000414704 586 ntBASIC4.33□□□□□ -1.72
UPF2Q9HAU5 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.33□□□□□ -1.72
UPF2Q9HAU5 AC027644.1-201ENST00000419595 298 ntBASIC4.33□□□□□ -1.72
UPF2Q9HAU5 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC4.33□□□□□ -1.72
UPF2Q9HAU5 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
UPF2Q9HAU5 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.33□□□□□ -1.72
UPF2Q9HAU5 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.33□□□□□ -1.72
UPF2Q9HAU5 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.33□□□□□ -1.72
UPF2Q9HAU5 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.33□□□□□ -1.72
UPF2Q9HAU5 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.33□□□□□ -1.72
UPF2Q9HAU5 Z77249.1-201ENST00000444622 1175 ntBASIC4.33□□□□□ -1.72
UPF2Q9HAU5 Z73417.1-201ENST00000447373 778 ntBASIC4.33□□□□□ -1.72
UPF2Q9HAU5 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.33□□□□□ -1.72
UPF2Q9HAU5 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.33□□□□□ -1.72
UPF2Q9HAU5 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.33□□□□□ -1.72
UPF2Q9HAU5 AC010683.1-201ENST00000473673 378 ntBASIC4.33□□□□□ -1.72
UPF2Q9HAU5 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
UPF2Q9HAU5 CEACAMP10-202ENST00000495431 496 ntBASIC4.33□□□□□ -1.72
UPF2Q9HAU5 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC4.33□□□□□ -1.72
UPF2Q9HAU5 AC002456.2-201ENST00000509356 380 ntBASIC4.33□□□□□ -1.72
UPF2Q9HAU5 FTH1P21-201ENST00000512179 511 ntBASIC4.33□□□□□ -1.72
UPF2Q9HAU5 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.33□□□□□ -1.72
UPF2Q9HAU5 AC107934.2-201ENST00000518653 310 ntBASIC4.33□□□□□ -1.72
UPF2Q9HAU5 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC4.33□□□□□ -1.72
UPF2Q9HAU5 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.33□□□□□ -1.72
UPF2Q9HAU5 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.33□□□□□ -1.72
UPF2Q9HAU5 AC004024.1-201ENST00000549244 247 ntBASIC4.33□□□□□ -1.72
UPF2Q9HAU5 AC025884.1-201ENST00000556034 378 ntBASIC4.33□□□□□ -1.72
UPF2Q9HAU5 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.33□□□□□ -1.72
UPF2Q9HAU5 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.33□□□□□ -1.72
UPF2Q9HAU5 MIR3186-201ENST00000577404 85 ntBASIC4.33□□□□□ -1.72
UPF2Q9HAU5 CCDC58P3-201ENST00000590792 430 ntBASIC4.33□□□□□ -1.72
UPF2Q9HAU5 AL035411.2-201ENST00000604022 421 ntBASIC4.33□□□□□ -1.72
UPF2Q9HAU5 AC010680.3-201ENST00000604215 520 ntBASIC4.33□□□□□ -1.72
UPF2Q9HAU5 AL591034.3-201ENST00000605511 685 ntBASIC4.33□□□□□ -1.72
UPF2Q9HAU5 AC092106.3-201ENST00000611308 722 ntBASIC4.33□□□□□ -1.72
UPF2Q9HAU5 MIR378J-201ENST00000611988 109 ntBASIC4.33□□□□□ -1.72
UPF2Q9HAU5 AL121594.5-201ENST00000631724 573 ntBASIC4.33□□□□□ -1.72
UPF2Q9HAU5 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
UPF2Q9HAU5 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
UPF2Q9HAU5 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
UPF2Q9HAU5 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
UPF2Q9HAU5 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.33□□□□□ -1.72
UPF2Q9HAU5 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
UPF2Q9HAU5 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.33□□□□□ -1.72
UPF2Q9HAU5 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
UPF2Q9HAU5 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC4.32□□□□□ -1.72
UPF2Q9HAU5 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.32□□□□□ -1.72
UPF2Q9HAU5 NMD3P1-201ENST00000439704 1488 ntBASIC4.32□□□□□ -1.72
UPF2Q9HAU5 AC007496.3-201ENST00000624987 3443 ntBASIC4.32□□□□□ -1.72
UPF2Q9HAU5 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
UPF2Q9HAU5 AC126755.2-208ENST00000327792 462 ntBASIC4.32□□□□□ -1.72
UPF2Q9HAU5 AC138969.1-213ENST00000331436 462 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms