Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
EBF3Q9H4W6 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.47□□□□□ -1.69
EBF3Q9H4W6 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
EBF3Q9H4W6 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
EBF3Q9H4W6 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
EBF3Q9H4W6 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.46□□□□□ -1.69
EBF3Q9H4W6 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.46□□□□□ -1.69
EBF3Q9H4W6 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.46□□□□□ -1.7
EBF3Q9H4W6 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
EBF3Q9H4W6 MAPK10-253ENST00000641010 4072 ntBASIC4.46□□□□□ -1.7
EBF3Q9H4W6 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
EBF3Q9H4W6 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
EBF3Q9H4W6 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.46□□□□□ -1.7
EBF3Q9H4W6 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
EBF3Q9H4W6 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
EBF3Q9H4W6 AC073544.1-201ENST00000600110 1595 ntBASIC4.46□□□□□ -1.7
EBF3Q9H4W6 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.46□□□□□ -1.7
EBF3Q9H4W6 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
EBF3Q9H4W6 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
EBF3Q9H4W6 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
EBF3Q9H4W6 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
EBF3Q9H4W6 SNORD74.4-201ENST00000364129 80 ntBASIC4.46□□□□□ -1.7
EBF3Q9H4W6 RNU6-1200P-201ENST00000384162 107 ntBASIC4.46□□□□□ -1.7
EBF3Q9H4W6 MIR320B1-201ENST00000390209 79 ntBASIC4.46□□□□□ -1.7
EBF3Q9H4W6 VN1R8P-201ENST00000407739 893 ntBASIC4.46□□□□□ -1.7
EBF3Q9H4W6 MTND1P21-201ENST00000412991 285 ntBASIC4.46□□□□□ -1.7
EBF3Q9H4W6 RPL21P91-201ENST00000429231 479 ntBASIC4.46□□□□□ -1.7
EBF3Q9H4W6 BTF3P10-201ENST00000433415 495 ntBASIC4.46□□□□□ -1.7
EBF3Q9H4W6 RPL7P29-201ENST00000437151 728 ntBASIC4.46□□□□□ -1.7
EBF3Q9H4W6 AL591503.2-201ENST00000442314 1005 ntBASIC4.46□□□□□ -1.7
EBF3Q9H4W6 AC005002.1-201ENST00000447458 540 ntBASIC4.46□□□□□ -1.7
EBF3Q9H4W6 XACT-201ENST00000468762 497 ntTSL 5 BASIC4.46□□□□□ -1.7
EBF3Q9H4W6 AC011979.1-201ENST00000472300 483 ntBASIC4.46□□□□□ -1.7
EBF3Q9H4W6 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.46□□□□□ -1.7
EBF3Q9H4W6 RPL9P33-201ENST00000484311 566 ntBASIC4.46□□□□□ -1.7
EBF3Q9H4W6 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC4.46□□□□□ -1.7
EBF3Q9H4W6 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC4.46□□□□□ -1.7
EBF3Q9H4W6 RPS27AP13-201ENST00000498403 237 ntBASIC4.46□□□□□ -1.7
EBF3Q9H4W6 PGBD4P4-201ENST00000509673 613 ntBASIC4.46□□□□□ -1.7
EBF3Q9H4W6 RNU6-1178P-201ENST00000516674 107 ntBASIC4.46□□□□□ -1.7
EBF3Q9H4W6 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC4.46□□□□□ -1.7
EBF3Q9H4W6 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC4.46□□□□□ -1.7
EBF3Q9H4W6 NAP1L1P1-201ENST00000524793 1063 ntBASIC4.46□□□□□ -1.7
EBF3Q9H4W6 AC107918.3-201ENST00000533272 382 ntBASIC4.46□□□□□ -1.7
EBF3Q9H4W6 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC4.46□□□□□ -1.7
EBF3Q9H4W6 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
EBF3Q9H4W6 HIGD1AP17-201ENST00000554576 276 ntBASIC4.46□□□□□ -1.7
EBF3Q9H4W6 AC087481.2-201ENST00000565492 330 ntBASIC4.46□□□□□ -1.7
EBF3Q9H4W6 AC034105.4-201ENST00000568304 277 ntBASIC4.46□□□□□ -1.7
EBF3Q9H4W6 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.46□□□□□ -1.7
EBF3Q9H4W6 MIR5708-201ENST00000579723 85 ntBASIC4.46□□□□□ -1.7
EBF3Q9H4W6 MIR4666A-201ENST00000580160 79 ntBASIC4.46□□□□□ -1.7
EBF3Q9H4W6 MIR548Y-201ENST00000582739 110 ntBASIC4.46□□□□□ -1.7
EBF3Q9H4W6 AL161729.3-201ENST00000603533 673 ntBASIC4.46□□□□□ -1.7
EBF3Q9H4W6 AC133552.5-201ENST00000604266 540 ntBASIC4.46□□□□□ -1.7
EBF3Q9H4W6 AC138749.5-201ENST00000611461 208 ntBASIC4.46□□□□□ -1.7
EBF3Q9H4W6 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC4.46□□□□□ -1.7
EBF3Q9H4W6 AL445363.3-201ENST00000623080 671 ntBASIC4.46□□□□□ -1.7
EBF3Q9H4W6 AC091905.2-201ENST00000623143 306 ntBASIC4.46□□□□□ -1.7
EBF3Q9H4W6 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.46□□□□□ -1.7
EBF3Q9H4W6 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC4.46□□□□□ -1.7
EBF3Q9H4W6 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
EBF3Q9H4W6 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.46□□□□□ -1.7
EBF3Q9H4W6 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.46□□□□□ -1.7
EBF3Q9H4W6 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
EBF3Q9H4W6 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.46□□□□□ -1.7
EBF3Q9H4W6 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
EBF3Q9H4W6 MTND4P31-201ENST00000425607 1343 ntBASIC4.46□□□□□ -1.7
EBF3Q9H4W6 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
EBF3Q9H4W6 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
EBF3Q9H4W6 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
EBF3Q9H4W6 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.45□□□□□ -1.7
EBF3Q9H4W6 RNU1-14P-201ENST00000362759 152 ntBASIC4.45□□□□□ -1.7
EBF3Q9H4W6 U3.4-201ENST00000363352 213 ntBASIC4.45□□□□□ -1.7
EBF3Q9H4W6 RNA5SP175-201ENST00000364275 119 ntBASIC4.45□□□□□ -1.7
EBF3Q9H4W6 Y_RNA.465-201ENST00000384293 102 ntBASIC4.45□□□□□ -1.7
EBF3Q9H4W6 RNU6-1119P-201ENST00000384349 108 ntBASIC4.45□□□□□ -1.7
EBF3Q9H4W6 PPIAP31-201ENST00000405422 495 ntBASIC4.45□□□□□ -1.7
EBF3Q9H4W6 AL445189.1-201ENST00000405722 338 ntBASIC4.45□□□□□ -1.7
EBF3Q9H4W6 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
EBF3Q9H4W6 RN7SKP235-201ENST00000410662 305 ntBASIC4.45□□□□□ -1.7
EBF3Q9H4W6 RNU6-920P-201ENST00000410926 92 ntBASIC4.45□□□□□ -1.7
EBF3Q9H4W6 PGBD4P8-201ENST00000412993 562 ntBASIC4.45□□□□□ -1.7
EBF3Q9H4W6 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.45□□□□□ -1.7
EBF3Q9H4W6 RPL36AP36-201ENST00000418616 301 ntBASIC4.45□□□□□ -1.7
EBF3Q9H4W6 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.45□□□□□ -1.7
EBF3Q9H4W6 AL157831.1-201ENST00000426134 473 ntBASIC4.45□□□□□ -1.7
EBF3Q9H4W6 MTCO2P19-201ENST00000427513 598 ntBASIC4.45□□□□□ -1.7
EBF3Q9H4W6 AL117339.2-201ENST00000430475 180 ntBASIC4.45□□□□□ -1.7
EBF3Q9H4W6 COX6B1P7-201ENST00000430845 235 ntBASIC4.45□□□□□ -1.7
EBF3Q9H4W6 RPL23AP25-201ENST00000430973 463 ntBASIC4.45□□□□□ -1.7
EBF3Q9H4W6 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC4.45□□□□□ -1.7
EBF3Q9H4W6 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.45□□□□□ -1.7
EBF3Q9H4W6 AP000936.3-201ENST00000438127 255 ntBASIC4.45□□□□□ -1.7
EBF3Q9H4W6 CACYBPP1-201ENST00000438592 684 ntBASIC4.45□□□□□ -1.7
EBF3Q9H4W6 AL512326.1-201ENST00000443050 721 ntBASIC4.45□□□□□ -1.7
EBF3Q9H4W6 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.45□□□□□ -1.7
EBF3Q9H4W6 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
EBF3Q9H4W6 GEMIN8P3-201ENST00000445417 720 ntBASIC4.45□□□□□ -1.7
EBF3Q9H4W6 HMGB1P48-201ENST00000446155 598 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms