Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC5.07□□□□□ -1.6
VPS11Q9H270 AC008521.2-201ENST00000591021 259 ntBASIC5.07□□□□□ -1.6
VPS11Q9H270 AC233280.2-201ENST00000603917 1070 ntBASIC5.07□□□□□ -1.6
VPS11Q9H270 AL035413.2-201ENST00000604801 525 ntBASIC5.07□□□□□ -1.6
VPS11Q9H270 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.07□□□□□ -1.6
VPS11Q9H270 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
VPS11Q9H270 AL359880.1-201ENST00000621879 266 ntBASIC5.07□□□□□ -1.6
VPS11Q9H270 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC5.07□□□□□ -1.6
VPS11Q9H270 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
VPS11Q9H270 AL359922.3-201ENST00000624779 1670 ntBASIC5.07□□□□□ -1.6
VPS11Q9H270 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
VPS11Q9H270 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.07□□□□□ -1.6
VPS11Q9H270 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
VPS11Q9H270 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
VPS11Q9H270 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
VPS11Q9H270 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
VPS11Q9H270 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
VPS11Q9H270 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.06□□□□□ -1.6
VPS11Q9H270 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.06□□□□□ -1.6
VPS11Q9H270 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VPS11Q9H270 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
VPS11Q9H270 MTND4P27-201ENST00000450813 1354 ntBASIC5.06□□□□□ -1.6
VPS11Q9H270 DHX9P1-201ENST00000436565 3076 ntBASIC5.06□□□□□ -1.6
VPS11Q9H270 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.06□□□□□ -1.6
VPS11Q9H270 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.06□□□□□ -1.6
VPS11Q9H270 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
VPS11Q9H270 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
VPS11Q9H270 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.06□□□□□ -1.6
VPS11Q9H270 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
VPS11Q9H270 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
VPS11Q9H270 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
VPS11Q9H270 RNU4-79P-201ENST00000362764 141 ntBASIC5.06□□□□□ -1.6
VPS11Q9H270 RNU5D-1-201ENST00000363299 116 ntBASIC5.06□□□□□ -1.6
VPS11Q9H270 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
VPS11Q9H270 MIR600-201ENST00000385007 98 ntBASIC5.06□□□□□ -1.6
VPS11Q9H270 AC007066.1-201ENST00000392902 381 ntBASIC5.06□□□□□ -1.6
VPS11Q9H270 AP000580.1-201ENST00000404439 358 ntBASIC5.06□□□□□ -1.6
VPS11Q9H270 RN7SKP285-201ENST00000410137 318 ntBASIC5.06□□□□□ -1.6
VPS11Q9H270 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.06□□□□□ -1.6
VPS11Q9H270 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.06□□□□□ -1.6
VPS11Q9H270 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC5.06□□□□□ -1.6
VPS11Q9H270 RBMY2KP-201ENST00000418221 992 ntBASIC5.06□□□□□ -1.6
VPS11Q9H270 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.06□□□□□ -1.6
VPS11Q9H270 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.06□□□□□ -1.6
VPS11Q9H270 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC5.06□□□□□ -1.6
VPS11Q9H270 AC069157.1-201ENST00000421749 137 ntBASIC5.06□□□□□ -1.6
VPS11Q9H270 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.06□□□□□ -1.6
VPS11Q9H270 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC5.06□□□□□ -1.6
VPS11Q9H270 RPL22P17-201ENST00000438729 315 ntBASIC5.06□□□□□ -1.6
VPS11Q9H270 AL161636.2-201ENST00000445179 927 ntBASIC5.06□□□□□ -1.6
VPS11Q9H270 AL645937.3-201ENST00000453647 936 ntBASIC5.06□□□□□ -1.6
VPS11Q9H270 snoU13.7-201ENST00000459220 104 ntBASIC5.06□□□□□ -1.6
VPS11Q9H270 SNORD42A-201ENST00000459584 64 ntBASIC5.06□□□□□ -1.6
VPS11Q9H270 RN7SL443P-201ENST00000464331 290 ntBASIC5.06□□□□□ -1.6
VPS11Q9H270 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.06□□□□□ -1.6
VPS11Q9H270 AC096576.1-201ENST00000489014 359 ntBASIC5.06□□□□□ -1.6
VPS11Q9H270 KLRA1P-201ENST00000503499 986 ntBASIC5.06□□□□□ -1.6
VPS11Q9H270 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
VPS11Q9H270 RPS4XP20-201ENST00000505751 772 ntBASIC5.06□□□□□ -1.6
VPS11Q9H270 NAF1-205ENST00000509434 385 ntTSL 3 BASIC5.06□□□□□ -1.6
VPS11Q9H270 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC5.06□□□□□ -1.6
VPS11Q9H270 SNORA48.10-201ENST00000516965 160 ntBASIC5.06□□□□□ -1.6
VPS11Q9H270 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.06□□□□□ -1.6
VPS11Q9H270 AC027309.2-201ENST00000520566 192 ntBASIC5.06□□□□□ -1.6
VPS11Q9H270 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC5.06□□□□□ -1.6
VPS11Q9H270 CA1-215ENST00000522389 551 ntTSL 3 BASIC5.06□□□□□ -1.6
VPS11Q9H270 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC5.06□□□□□ -1.6
VPS11Q9H270 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.06□□□□□ -1.6
VPS11Q9H270 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.06□□□□□ -1.6
VPS11Q9H270 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC5.06□□□□□ -1.6
VPS11Q9H270 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.06□□□□□ -1.6
VPS11Q9H270 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC5.06□□□□□ -1.6
VPS11Q9H270 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC5.06□□□□□ -1.6
VPS11Q9H270 AL009028.1-201ENST00000604895 802 ntBASIC5.06□□□□□ -1.6
VPS11Q9H270 AC024560.3-201ENST00000608482 349 ntBASIC5.06□□□□□ -1.6
VPS11Q9H270 RNA5SP440-201ENST00000612665 119 ntBASIC5.06□□□□□ -1.6
VPS11Q9H270 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.06□□□□□ -1.6
VPS11Q9H270 AC018816.2-201ENST00000621460 353 ntBASIC5.06□□□□□ -1.6
VPS11Q9H270 AC127024.6-201ENST00000621598 424 ntBASIC5.06□□□□□ -1.6
VPS11Q9H270 MIR6863-201ENST00000636112 90 ntBASIC5.06□□□□□ -1.6
VPS11Q9H270 MTND5P28-201ENST00000438005 1594 ntBASIC5.06□□□□□ -1.6
VPS11Q9H270 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
VPS11Q9H270 AC083843.3-201ENST00000623679 2186 ntBASIC5.06□□□□□ -1.6
VPS11Q9H270 CCT4P2-201ENST00000233836 1548 ntBASIC5.06□□□□□ -1.6
VPS11Q9H270 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
VPS11Q9H270 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.06□□□□□ -1.6
VPS11Q9H270 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.06□□□□□ -1.6
VPS11Q9H270 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.06□□□□□ -1.6
VPS11Q9H270 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC5.06□□□□□ -1.6
VPS11Q9H270 AC135352.1-201ENST00000506173 1418 ntBASIC5.06□□□□□ -1.6
VPS11Q9H270 AL592437.2-201ENST00000421655 2434 ntBASIC5.05□□□□□ -1.6
VPS11Q9H270 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC5.05□□□□□ -1.6
VPS11Q9H270 RNU6-907P-201ENST00000390924 102 ntBASIC5.05□□□□□ -1.6
VPS11Q9H270 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
VPS11Q9H270 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.05□□□□□ -1.6
VPS11Q9H270 RNU2-42P-201ENST00000410697 113 ntBASIC5.05□□□□□ -1.6
VPS11Q9H270 HMGB3P23-201ENST00000414981 585 ntBASIC5.05□□□□□ -1.6
VPS11Q9H270 RPS3AP9-201ENST00000417027 792 ntBASIC5.05□□□□□ -1.6
VPS11Q9H270 AC073136.2-201ENST00000417282 849 ntBASIC5.05□□□□□ -1.6
VPS11Q9H270 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms