Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC6.05□□□□□ -1.44
COL25A1Q9BXS0 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.05□□□□□ -1.44
COL25A1Q9BXS0 CTAGE11P-201ENST00000451540 2353 ntBASIC6.05□□□□□ -1.44
COL25A1Q9BXS0 TRIM51HP-202ENST00000530412 1823 ntBASIC6.05□□□□□ -1.44
COL25A1Q9BXS0 RNU6-1290P-201ENST00000362957 109 ntBASIC6.05□□□□□ -1.44
COL25A1Q9BXS0 RNU6-343P-201ENST00000364709 104 ntBASIC6.05□□□□□ -1.44
COL25A1Q9BXS0 RNA5SP505-201ENST00000364748 108 ntBASIC6.05□□□□□ -1.44
COL25A1Q9BXS0 RNU6-81P-201ENST00000365608 104 ntBASIC6.05□□□□□ -1.44
COL25A1Q9BXS0 OR52E6-202ENST00000379946 954 ntBASIC6.05□□□□□ -1.44
COL25A1Q9BXS0 RNU6-532P-201ENST00000384318 107 ntBASIC6.05□□□□□ -1.44
COL25A1Q9BXS0 MIR613-201ENST00000385248 95 ntBASIC6.05□□□□□ -1.44
COL25A1Q9BXS0 POLHP1-201ENST00000411806 470 ntBASIC6.05□□□□□ -1.44
COL25A1Q9BXS0 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC6.05□□□□□ -1.44
COL25A1Q9BXS0 RPL18P10-201ENST00000425606 538 ntBASIC6.05□□□□□ -1.44
COL25A1Q9BXS0 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC6.05□□□□□ -1.44
COL25A1Q9BXS0 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC6.05□□□□□ -1.44
COL25A1Q9BXS0 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC6.05□□□□□ -1.44
COL25A1Q9BXS0 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC6.05□□□□□ -1.44
COL25A1Q9BXS0 RPS7P5-201ENST00000441482 581 ntBASIC6.05□□□□□ -1.44
COL25A1Q9BXS0 AC004129.2-201ENST00000457229 287 ntBASIC6.05□□□□□ -1.44
COL25A1Q9BXS0 AC004801.2-202ENST00000463559 283 ntBASIC6.05□□□□□ -1.44
COL25A1Q9BXS0 IL7-206ENST00000520269 456 ntTSL 3 BASIC6.05□□□□□ -1.44
COL25A1Q9BXS0 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC6.05□□□□□ -1.44
COL25A1Q9BXS0 PMS2P3-207ENST00000529061 717 ntBASIC6.05□□□□□ -1.44
COL25A1Q9BXS0 AC135001.1-201ENST00000544546 283 ntBASIC6.05□□□□□ -1.44
COL25A1Q9BXS0 DPPA3P2-201ENST00000553589 478 ntBASIC6.05□□□□□ -1.44
COL25A1Q9BXS0 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.05□□□□□ -1.44
COL25A1Q9BXS0 RPL21P12-201ENST00000559810 515 ntBASIC6.05□□□□□ -1.44
COL25A1Q9BXS0 OR4H6P-201ENST00000563771 921 ntBASIC6.05□□□□□ -1.44
COL25A1Q9BXS0 AC018552.3-201ENST00000567416 561 ntBASIC6.05□□□□□ -1.44
COL25A1Q9BXS0 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC6.05□□□□□ -1.44
COL25A1Q9BXS0 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC6.05□□□□□ -1.44
COL25A1Q9BXS0 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC6.05□□□□□ -1.44
COL25A1Q9BXS0 AC092747.3-201ENST00000603769 301 ntBASIC6.05□□□□□ -1.44
COL25A1Q9BXS0 AC073657.2-201ENST00000605661 303 ntBASIC6.05□□□□□ -1.44
COL25A1Q9BXS0 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC6.05□□□□□ -1.44
COL25A1Q9BXS0 AL627230.1-201ENST00000613077 211 ntBASIC6.05□□□□□ -1.44
COL25A1Q9BXS0 ATP5A1P2-202ENST00000616464 443 ntBASIC6.05□□□□□ -1.44
COL25A1Q9BXS0 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
COL25A1Q9BXS0 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.05□□□□□ -1.44
COL25A1Q9BXS0 AC097714.1-201ENST00000511272 1647 ntBASIC6.05□□□□□ -1.44
COL25A1Q9BXS0 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
COL25A1Q9BXS0 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
COL25A1Q9BXS0 WDR64-204ENST00000437684 2310 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
COL25A1Q9BXS0 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
COL25A1Q9BXS0 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
COL25A1Q9BXS0 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC6.05□□□□□ -1.44
COL25A1Q9BXS0 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
COL25A1Q9BXS0 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
COL25A1Q9BXS0 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC6.05□□□□□ -1.44
COL25A1Q9BXS0 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
COL25A1Q9BXS0 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC6.05□□□□□ -1.44
COL25A1Q9BXS0 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
COL25A1Q9BXS0 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
COL25A1Q9BXS0 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC6.05□□□□□ -1.44
COL25A1Q9BXS0 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
COL25A1Q9BXS0 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL25A1Q9BXS0 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC6.04□□□□□ -1.44
COL25A1Q9BXS0 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
COL25A1Q9BXS0 ZNF844-202ENST00000441304 2036 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
COL25A1Q9BXS0 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC6.04□□□□□ -1.44
COL25A1Q9BXS0 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL25A1Q9BXS0 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL25A1Q9BXS0 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC6.04□□□□□ -1.44
COL25A1Q9BXS0 AL122126.1-201ENST00000546905 1318 ntBASIC6.04□□□□□ -1.44
COL25A1Q9BXS0 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC6.04□□□□□ -1.44
COL25A1Q9BXS0 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
COL25A1Q9BXS0 AC232271.1-201ENST00000602455 2715 ntBASIC6.04□□□□□ -1.44
COL25A1Q9BXS0 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
COL25A1Q9BXS0 RNA5SP123-201ENST00000363244 119 ntBASIC6.04□□□□□ -1.44
COL25A1Q9BXS0 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL25A1Q9BXS0 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC6.04□□□□□ -1.44
COL25A1Q9BXS0 MRPS18CP6-201ENST00000423587 223 ntBASIC6.04□□□□□ -1.44
COL25A1Q9BXS0 AC099677.3-201ENST00000427081 395 ntBASIC6.04□□□□□ -1.44
COL25A1Q9BXS0 RPL7P2-201ENST00000427639 268 ntBASIC6.04□□□□□ -1.44
COL25A1Q9BXS0 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC6.04□□□□□ -1.44
COL25A1Q9BXS0 AC099799.1-201ENST00000439809 192 ntBASIC6.04□□□□□ -1.44
COL25A1Q9BXS0 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.04□□□□□ -1.44
COL25A1Q9BXS0 RANP2-201ENST00000456833 229 ntBASIC6.04□□□□□ -1.44
COL25A1Q9BXS0 AL445687.2-201ENST00000458156 728 ntBASIC6.04□□□□□ -1.44
COL25A1Q9BXS0 RPS29P26-201ENST00000477483 171 ntBASIC6.04□□□□□ -1.44
COL25A1Q9BXS0 SNORA25.11-201ENST00000515935 105 ntBASIC6.04□□□□□ -1.44
COL25A1Q9BXS0 SCARNA16.2-201ENST00000516520 172 ntBASIC6.04□□□□□ -1.44
COL25A1Q9BXS0 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
COL25A1Q9BXS0 AP003497.1-201ENST00000528472 562 ntBASIC6.04□□□□□ -1.44
COL25A1Q9BXS0 MAGOH2P-202ENST00000584384 429 ntBASIC6.04□□□□□ -1.44
COL25A1Q9BXS0 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC6.04□□□□□ -1.44
COL25A1Q9BXS0 MZT1P2-201ENST00000604387 248 ntBASIC6.04□□□□□ -1.44
COL25A1Q9BXS0 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.04□□□□□ -1.44
COL25A1Q9BXS0 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC6.04□□□□□ -1.44
COL25A1Q9BXS0 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
COL25A1Q9BXS0 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL25A1Q9BXS0 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL25A1Q9BXS0 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
COL25A1Q9BXS0 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL25A1Q9BXS0 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC6.04□□□□□ -1.44
COL25A1Q9BXS0 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL25A1Q9BXS0 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL25A1Q9BXS0 ZNF658B-201ENST00000602828 3408 ntBASIC6.04□□□□□ -1.44
COL25A1Q9BXS0 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms