Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 AL807761.1-201ENST00000417622 171 ntBASIC6.2□□□□□ -1.42
TRAIPQ9BWF2 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC6.2□□□□□ -1.42
TRAIPQ9BWF2 AL133173.1-201ENST00000423458 397 ntBASIC6.2□□□□□ -1.42
TRAIPQ9BWF2 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC6.2□□□□□ -1.42
TRAIPQ9BWF2 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC6.2□□□□□ -1.42
TRAIPQ9BWF2 BTF3P10-201ENST00000433415 495 ntBASIC6.2□□□□□ -1.42
TRAIPQ9BWF2 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC6.2□□□□□ -1.42
TRAIPQ9BWF2 CNOT7P2-201ENST00000441051 832 ntBASIC6.2□□□□□ -1.42
TRAIPQ9BWF2 AC104651.2-201ENST00000447549 528 ntBASIC6.2□□□□□ -1.42
TRAIPQ9BWF2 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC6.2□□□□□ -1.42
TRAIPQ9BWF2 CREM-238ENST00000488741 651 ntTSL 2 BASIC6.2□□□□□ -1.42
TRAIPQ9BWF2 IL7R-208ENST00000511982 612 ntTSL 2 BASIC6.2□□□□□ -1.42
TRAIPQ9BWF2 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC6.2□□□□□ -1.42
TRAIPQ9BWF2 RNU6-64P-201ENST00000517119 105 ntBASIC6.2□□□□□ -1.42
TRAIPQ9BWF2 RNU6-1220P-201ENST00000517126 108 ntBASIC6.2□□□□□ -1.42
TRAIPQ9BWF2 AC027308.1-201ENST00000517993 110 ntBASIC6.2□□□□□ -1.42
TRAIPQ9BWF2 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC6.2□□□□□ -1.42
TRAIPQ9BWF2 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC6.2□□□□□ -1.42
TRAIPQ9BWF2 AC060780.2-201ENST00000589047 198 ntBASIC6.2□□□□□ -1.42
TRAIPQ9BWF2 GLUD1P4-201ENST00000590914 418 ntBASIC6.2□□□□□ -1.42
TRAIPQ9BWF2 AC006363.1-201ENST00000603806 463 ntBASIC6.2□□□□□ -1.42
TRAIPQ9BWF2 ABBA01000935.2-201ENST00000637477 838 ntBASIC6.2□□□□□ -1.42
TRAIPQ9BWF2 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TRAIPQ9BWF2 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
TRAIPQ9BWF2 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
TRAIPQ9BWF2 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TRAIPQ9BWF2 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.2□□□□□ -1.42
TRAIPQ9BWF2 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC6.19□□□□□ -1.42
TRAIPQ9BWF2 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRAIPQ9BWF2 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC6.19□□□□□ -1.42
TRAIPQ9BWF2 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRAIPQ9BWF2 AC020656.2-201ENST00000613291 5309 ntBASIC6.19□□□□□ -1.42
TRAIPQ9BWF2 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC6.19□□□□□ -1.42
TRAIPQ9BWF2 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
TRAIPQ9BWF2 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRAIPQ9BWF2 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC6.19□□□□□ -1.42
TRAIPQ9BWF2 RNA5SP455-201ENST00000365190 119 ntBASIC6.19□□□□□ -1.42
TRAIPQ9BWF2 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
TRAIPQ9BWF2 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC6.19□□□□□ -1.42
TRAIPQ9BWF2 RPL21P24-201ENST00000413752 448 ntBASIC6.19□□□□□ -1.42
TRAIPQ9BWF2 AL354868.1-201ENST00000417077 482 ntBASIC6.19□□□□□ -1.42
TRAIPQ9BWF2 HMGB3P20-201ENST00000417997 600 ntBASIC6.19□□□□□ -1.42
TRAIPQ9BWF2 AC009480.2-201ENST00000422916 432 ntBASIC6.19□□□□□ -1.42
TRAIPQ9BWF2 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC6.19□□□□□ -1.42
TRAIPQ9BWF2 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC6.19□□□□□ -1.42
TRAIPQ9BWF2 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC6.19□□□□□ -1.42
TRAIPQ9BWF2 RPS20P5-201ENST00000434808 360 ntBASIC6.19□□□□□ -1.42
TRAIPQ9BWF2 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC6.19□□□□□ -1.42
TRAIPQ9BWF2 AC114755.5-201ENST00000447760 831 ntBASIC6.19□□□□□ -1.42
TRAIPQ9BWF2 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC6.19□□□□□ -1.42
TRAIPQ9BWF2 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC6.19□□□□□ -1.42
TRAIPQ9BWF2 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC6.19□□□□□ -1.42
TRAIPQ9BWF2 SNORD97-201ENST00000459187 142 ntBASIC6.19□□□□□ -1.42
TRAIPQ9BWF2 DAP3-209ENST00000465375 729 ntTSL 2 BASIC6.19□□□□□ -1.42
TRAIPQ9BWF2 RPL36AP51-201ENST00000487216 318 ntBASIC6.19□□□□□ -1.42
TRAIPQ9BWF2 SCARNA24.1-201ENST00000516465 137 ntBASIC6.19□□□□□ -1.42
TRAIPQ9BWF2 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC6.19□□□□□ -1.42
TRAIPQ9BWF2 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC6.19□□□□□ -1.42
TRAIPQ9BWF2 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC6.19□□□□□ -1.42
TRAIPQ9BWF2 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC6.19□□□□□ -1.42
TRAIPQ9BWF2 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC6.19□□□□□ -1.42
TRAIPQ9BWF2 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC6.19□□□□□ -1.42
TRAIPQ9BWF2 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC6.19□□□□□ -1.42
TRAIPQ9BWF2 NOP10-202ENST00000557912 436 ntTSL 2 BASIC6.19□□□□□ -1.42
TRAIPQ9BWF2 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC6.19□□□□□ -1.42
TRAIPQ9BWF2 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC6.19□□□□□ -1.42
TRAIPQ9BWF2 AC055876.1-202ENST00000567053 138 ntBASIC6.19□□□□□ -1.42
TRAIPQ9BWF2 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC6.19□□□□□ -1.42
TRAIPQ9BWF2 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC6.19□□□□□ -1.42
TRAIPQ9BWF2 AC025449.1-201ENST00000603896 529 ntBASIC6.19□□□□□ -1.42
TRAIPQ9BWF2 AC093788.1-201ENST00000609356 927 ntBASIC6.19□□□□□ -1.42
TRAIPQ9BWF2 AC022106.2-201ENST00000620114 757 ntBASIC6.19□□□□□ -1.42
TRAIPQ9BWF2 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC6.19□□□□□ -1.42
TRAIPQ9BWF2 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC6.19□□□□□ -1.42
TRAIPQ9BWF2 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.19□□□□□ -1.42
TRAIPQ9BWF2 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TRAIPQ9BWF2 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC6.19□□□□□ -1.42
TRAIPQ9BWF2 AC138907.8-201ENST00000623981 2256 ntBASIC6.19□□□□□ -1.42
TRAIPQ9BWF2 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.19□□□□□ -1.42
TRAIPQ9BWF2 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
TRAIPQ9BWF2 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC6.18□□□□□ -1.42
TRAIPQ9BWF2 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
TRAIPQ9BWF2 API5-210ENST00000534600 1760 ntTSL 5 BASIC6.18□□□□□ -1.42
TRAIPQ9BWF2 AL365440.1-201ENST00000436135 2167 ntBASIC6.18□□□□□ -1.42
TRAIPQ9BWF2 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.18□□□□□ -1.42
TRAIPQ9BWF2 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
TRAIPQ9BWF2 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC6.18□□□□□ -1.42
TRAIPQ9BWF2 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
TRAIPQ9BWF2 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC6.18□□□□□ -1.42
TRAIPQ9BWF2 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.18□□□□□ -1.42
TRAIPQ9BWF2 CR848007.1-201ENST00000442354 1699 ntBASIC6.18□□□□□ -1.42
TRAIPQ9BWF2 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
TRAIPQ9BWF2 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
TRAIPQ9BWF2 RNA5SP183-201ENST00000362452 119 ntBASIC6.18□□□□□ -1.42
TRAIPQ9BWF2 Y_RNA.89-201ENST00000363031 102 ntBASIC6.18□□□□□ -1.42
TRAIPQ9BWF2 U3.10-201ENST00000364459 214 ntBASIC6.18□□□□□ -1.42
TRAIPQ9BWF2 RNU6-641P-201ENST00000384006 107 ntBASIC6.18□□□□□ -1.42
TRAIPQ9BWF2 MIR135A2-201ENST00000384854 100 ntBASIC6.18□□□□□ -1.42
TRAIPQ9BWF2 DBIP1-201ENST00000401435 260 ntBASIC6.18□□□□□ -1.42
TRAIPQ9BWF2 RPS4XP8-201ENST00000402039 771 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms