Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC6.2□□□□□ -1.42
USB1Q9BQ65 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
USB1Q9BQ65 RN7SKP171-201ENST00000364417 303 ntBASIC6.2□□□□□ -1.42
USB1Q9BQ65 MIR99A-201ENST00000384906 81 ntBASIC6.2□□□□□ -1.42
USB1Q9BQ65 SNORD73A-201ENST00000386062 65 ntBASIC6.2□□□□□ -1.42
USB1Q9BQ65 RNU6-493P-201ENST00000391321 108 ntBASIC6.2□□□□□ -1.42
USB1Q9BQ65 MRPL35P1-201ENST00000404272 572 ntBASIC6.2□□□□□ -1.42
USB1Q9BQ65 AC244452.1-201ENST00000413798 141 ntBASIC6.2□□□□□ -1.42
USB1Q9BQ65 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC6.2□□□□□ -1.42
USB1Q9BQ65 AC092423.1-201ENST00000430165 186 ntBASIC6.2□□□□□ -1.42
USB1Q9BQ65 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
USB1Q9BQ65 RPL23AP33-201ENST00000442301 452 ntBASIC6.2□□□□□ -1.42
USB1Q9BQ65 HMGN1P2-201ENST00000445197 310 ntBASIC6.2□□□□□ -1.42
USB1Q9BQ65 AL162389.1-201ENST00000449233 177 ntBASIC6.2□□□□□ -1.42
USB1Q9BQ65 PRDX1P1-201ENST00000449329 596 ntBASIC6.2□□□□□ -1.42
USB1Q9BQ65 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC6.2□□□□□ -1.42
USB1Q9BQ65 AL136097.1-201ENST00000456945 913 ntBASIC6.2□□□□□ -1.42
USB1Q9BQ65 GAPDHP53-201ENST00000458397 924 ntBASIC6.2□□□□□ -1.42
USB1Q9BQ65 RNU7-120P-201ENST00000459334 63 ntBASIC6.2□□□□□ -1.42
USB1Q9BQ65 RPL7P49-201ENST00000471402 708 ntBASIC6.2□□□□□ -1.42
USB1Q9BQ65 RN7SL717P-201ENST00000478343 297 ntBASIC6.2□□□□□ -1.42
USB1Q9BQ65 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC6.2□□□□□ -1.42
USB1Q9BQ65 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC6.2□□□□□ -1.42
USB1Q9BQ65 AC146944.3-201ENST00000509969 371 ntBASIC6.2□□□□□ -1.42
USB1Q9BQ65 RNU6-677P-201ENST00000516914 101 ntBASIC6.2□□□□□ -1.42
USB1Q9BQ65 RN7SKP233-201ENST00000517005 110 ntBASIC6.2□□□□□ -1.42
USB1Q9BQ65 CARSP2-201ENST00000520688 277 ntBASIC6.2□□□□□ -1.42
USB1Q9BQ65 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC6.2□□□□□ -1.42
USB1Q9BQ65 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC6.2□□□□□ -1.42
USB1Q9BQ65 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC6.2□□□□□ -1.42
USB1Q9BQ65 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.2□□□□□ -1.42
USB1Q9BQ65 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC6.2□□□□□ -1.42
USB1Q9BQ65 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC6.2□□□□□ -1.42
USB1Q9BQ65 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC6.2□□□□□ -1.42
USB1Q9BQ65 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC6.2□□□□□ -1.42
USB1Q9BQ65 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC6.2□□□□□ -1.42
USB1Q9BQ65 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
USB1Q9BQ65 AL161420.1-201ENST00000619393 264 ntBASIC6.2□□□□□ -1.42
USB1Q9BQ65 CYP4F35P-202ENST00000636121 390 ntBASIC6.2□□□□□ -1.42
USB1Q9BQ65 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
USB1Q9BQ65 TMC3-AS1-206ENST00000612811 2726 ntBASIC6.2□□□□□ -1.42
USB1Q9BQ65 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
USB1Q9BQ65 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.2□□□□□ -1.42
USB1Q9BQ65 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
USB1Q9BQ65 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
USB1Q9BQ65 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
USB1Q9BQ65 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC6.2□□□□□ -1.42
USB1Q9BQ65 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
USB1Q9BQ65 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
USB1Q9BQ65 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
USB1Q9BQ65 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC6.19□□□□□ -1.42
USB1Q9BQ65 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
USB1Q9BQ65 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
USB1Q9BQ65 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
USB1Q9BQ65 DDX10P1-201ENST00000448545 1933 ntBASIC6.19□□□□□ -1.42
USB1Q9BQ65 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
USB1Q9BQ65 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
USB1Q9BQ65 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
USB1Q9BQ65 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
USB1Q9BQ65 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
USB1Q9BQ65 RNU1-24P-201ENST00000364285 165 ntBASIC6.19□□□□□ -1.42
USB1Q9BQ65 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
USB1Q9BQ65 SNORA69.1-201ENST00000390904 137 ntBASIC6.19□□□□□ -1.42
USB1Q9BQ65 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
USB1Q9BQ65 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC6.19□□□□□ -1.42
USB1Q9BQ65 AL160275.3-201ENST00000423876 471 ntBASIC6.19□□□□□ -1.42
USB1Q9BQ65 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC6.19□□□□□ -1.42
USB1Q9BQ65 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC6.19□□□□□ -1.42
USB1Q9BQ65 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC6.19□□□□□ -1.42
USB1Q9BQ65 CEACAMP1-201ENST00000434624 1035 ntBASIC6.19□□□□□ -1.42
USB1Q9BQ65 AL604028.2-201ENST00000437848 788 ntBASIC6.19□□□□□ -1.42
USB1Q9BQ65 RPL29P29-201ENST00000448725 423 ntBASIC6.19□□□□□ -1.42
USB1Q9BQ65 RPL37P6-201ENST00000460682 294 ntBASIC6.19□□□□□ -1.42
USB1Q9BQ65 AC117395.2-201ENST00000463122 1128 ntBASIC6.19□□□□□ -1.42
USB1Q9BQ65 AC068522.1-201ENST00000482895 345 ntBASIC6.19□□□□□ -1.42
USB1Q9BQ65 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC6.19□□□□□ -1.42
USB1Q9BQ65 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC6.19□□□□□ -1.42
USB1Q9BQ65 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC6.19□□□□□ -1.42
USB1Q9BQ65 RN7SKP11-201ENST00000517018 287 ntBASIC6.19□□□□□ -1.42
USB1Q9BQ65 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC6.19□□□□□ -1.42
USB1Q9BQ65 AP006587.4-201ENST00000526053 529 ntBASIC6.19□□□□□ -1.42
USB1Q9BQ65 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC6.19□□□□□ -1.42
USB1Q9BQ65 SAA3P-201ENST00000533267 365 ntBASIC6.19□□□□□ -1.42
USB1Q9BQ65 MIR4800-201ENST00000537353 80 ntBASIC6.19□□□□□ -1.42
USB1Q9BQ65 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC6.19□□□□□ -1.42
USB1Q9BQ65 AL135978.1-201ENST00000553618 1266 ntBASIC6.19□□□□□ -1.42
USB1Q9BQ65 AMZ2P1-203ENST00000565833 850 ntBASIC6.19□□□□□ -1.42
USB1Q9BQ65 OR1F2P-201ENST00000570470 933 ntBASIC6.19□□□□□ -1.42
USB1Q9BQ65 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC6.19□□□□□ -1.42
USB1Q9BQ65 NF1P5-201ENST00000588287 448 ntBASIC6.19□□□□□ -1.42
USB1Q9BQ65 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC6.19□□□□□ -1.42
USB1Q9BQ65 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.19□□□□□ -1.42
USB1Q9BQ65 AL138960.1-201ENST00000613838 513 ntBASIC6.19□□□□□ -1.42
USB1Q9BQ65 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC6.19□□□□□ -1.42
USB1Q9BQ65 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.19□□□□□ -1.42
USB1Q9BQ65 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
USB1Q9BQ65 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
USB1Q9BQ65 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
USB1Q9BQ65 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
USB1Q9BQ65 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms