Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC090013.1-201ENST00000485147 480 ntBASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 AC011005.3-201ENST00000491624 395 ntBASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 RPL7P24-201ENST00000493052 752 ntBASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 NAF1-205ENST00000509434 385 ntTSL 3 BASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 RNU1-6P-201ENST00000516290 144 ntBASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 snoU109.6-201ENST00000516831 118 ntBASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 AC083923.1-201ENST00000523708 376 ntBASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 AC109635.6-201ENST00000525487 1113 ntBASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 OSBPL9P2-201ENST00000526582 1228 ntBASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 AL442663.2-201ENST00000554385 511 ntBASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 HMGB1P33-201ENST00000563485 527 ntBASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 AC034268.2-201ENST00000571784 482 ntBASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 MIR4666A-201ENST00000580160 79 ntBASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 MIR4270-201ENST00000581799 70 ntBASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 AC010928.3-201ENST00000587712 541 ntBASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 AC104785.1-201ENST00000603220 588 ntBASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 AL139286.1-201ENST00000604465 483 ntBASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 AL009028.1-201ENST00000604895 802 ntBASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 BNIP3P4-201ENST00000604946 565 ntBASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 AC023813.4-201ENST00000607580 580 ntBASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 AC093788.1-201ENST00000609356 927 ntBASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 AL590282.1-201ENST00000610379 1136 ntBASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 AL592295.2-201ENST00000612578 206 ntBASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 AC008250.2-201ENST00000615261 205 ntBASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 MLECP1-201ENST00000615893 709 ntBASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 RPL23AP61-201ENST00000623642 466 ntBASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 CRYM-AS1-204ENST00000637983 556 ntBASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.07□□□□□ -1.6
CDK5RAP1Q96SZ6 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.06□□□□□ -1.6
CDK5RAP1Q96SZ6 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
CDK5RAP1Q96SZ6 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.06□□□□□ -1.6
CDK5RAP1Q96SZ6 ZFRP1-201ENST00000457579 2970 ntBASIC5.06□□□□□ -1.6
CDK5RAP1Q96SZ6 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CDK5RAP1Q96SZ6 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CDK5RAP1Q96SZ6 RN7SKP224-201ENST00000364140 325 ntBASIC5.06□□□□□ -1.6
CDK5RAP1Q96SZ6 RNU5E-5P-201ENST00000365379 116 ntBASIC5.06□□□□□ -1.6
CDK5RAP1Q96SZ6 RNU6-483P-201ENST00000384088 108 ntBASIC5.06□□□□□ -1.6
CDK5RAP1Q96SZ6 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CDK5RAP1Q96SZ6 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CDK5RAP1Q96SZ6 MIR298-201ENST00000401212 88 ntBASIC5.06□□□□□ -1.6
CDK5RAP1Q96SZ6 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CDK5RAP1Q96SZ6 RN7SKP16-201ENST00000410180 299 ntBASIC5.06□□□□□ -1.6
CDK5RAP1Q96SZ6 USP9YP27-201ENST00000418455 438 ntBASIC5.06□□□□□ -1.6
CDK5RAP1Q96SZ6 RPA2P2-201ENST00000419698 796 ntBASIC5.06□□□□□ -1.6
CDK5RAP1Q96SZ6 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.06□□□□□ -1.6
CDK5RAP1Q96SZ6 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.06□□□□□ -1.6
CDK5RAP1Q96SZ6 VDAC1P6-201ENST00000430062 855 ntBASIC5.06□□□□□ -1.6
CDK5RAP1Q96SZ6 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC5.06□□□□□ -1.6
CDK5RAP1Q96SZ6 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.06□□□□□ -1.6
CDK5RAP1Q96SZ6 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC5.06□□□□□ -1.6
CDK5RAP1Q96SZ6 AP000936.3-201ENST00000438127 255 ntBASIC5.06□□□□□ -1.6
CDK5RAP1Q96SZ6 AC023512.1-201ENST00000444513 499 ntBASIC5.06□□□□□ -1.6
CDK5RAP1Q96SZ6 FABP3P2-201ENST00000453169 399 ntBASIC5.06□□□□□ -1.6
CDK5RAP1Q96SZ6 RNA5SP103-201ENST00000459503 118 ntBASIC5.06□□□□□ -1.6
CDK5RAP1Q96SZ6 RPS29P22-201ENST00000472363 168 ntBASIC5.06□□□□□ -1.6
CDK5RAP1Q96SZ6 LARP1BP2-201ENST00000486594 519 ntBASIC5.06□□□□□ -1.6
CDK5RAP1Q96SZ6 RN7SL346P-201ENST00000491561 294 ntBASIC5.06□□□□□ -1.6
CDK5RAP1Q96SZ6 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CDK5RAP1Q96SZ6 RN7SL558P-201ENST00000497468 299 ntBASIC5.06□□□□□ -1.6
CDK5RAP1Q96SZ6 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC5.06□□□□□ -1.6
CDK5RAP1Q96SZ6 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC5.06□□□□□ -1.6
CDK5RAP1Q96SZ6 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
CDK5RAP1Q96SZ6 RNU6-416P-201ENST00000516265 103 ntBASIC5.06□□□□□ -1.6
CDK5RAP1Q96SZ6 PAICSP4-201ENST00000517543 1253 ntBASIC5.06□□□□□ -1.6
CDK5RAP1Q96SZ6 AP001893.2-201ENST00000526949 202 ntBASIC5.06□□□□□ -1.6
CDK5RAP1Q96SZ6 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.06□□□□□ -1.6
CDK5RAP1Q96SZ6 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC5.06□□□□□ -1.6
CDK5RAP1Q96SZ6 GTF2IP8-201ENST00000560687 584 ntBASIC5.06□□□□□ -1.6
CDK5RAP1Q96SZ6 AC137800.2-201ENST00000574375 120 ntBASIC5.06□□□□□ -1.6
CDK5RAP1Q96SZ6 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC5.06□□□□□ -1.6
CDK5RAP1Q96SZ6 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC5.06□□□□□ -1.6
CDK5RAP1Q96SZ6 AC069304.2-201ENST00000605154 435 ntBASIC5.06□□□□□ -1.6
CDK5RAP1Q96SZ6 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.06□□□□□ -1.6
CDK5RAP1Q96SZ6 YWHAEP7-203ENST00000622054 312 ntBASIC5.06□□□□□ -1.6
CDK5RAP1Q96SZ6 AP003122.6-201ENST00000623831 495 ntBASIC5.06□□□□□ -1.6
CDK5RAP1Q96SZ6 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC5.06□□□□□ -1.6
CDK5RAP1Q96SZ6 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.06□□□□□ -1.6
CDK5RAP1Q96SZ6 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
CDK5RAP1Q96SZ6 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.06□□□□□ -1.6
CDK5RAP1Q96SZ6 AC000374.1-201ENST00000434698 1745 ntBASIC5.06□□□□□ -1.6
CDK5RAP1Q96SZ6 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
CDK5RAP1Q96SZ6 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.05□□□□□ -1.6
CDK5RAP1Q96SZ6 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CDK5RAP1Q96SZ6 MAPK10-349ENST00000641767 3661 ntBASIC5.05□□□□□ -1.6
CDK5RAP1Q96SZ6 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CDK5RAP1Q96SZ6 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CDK5RAP1Q96SZ6 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 169.2 ms