Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
IFT140Q96RY7 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC4.69□□□□□ -1.66
IFT140Q96RY7 RNU6ATAC3P-201ENST00000387974 126 ntBASIC4.69□□□□□ -1.66
IFT140Q96RY7 AL450263.2-201ENST00000439400 589 ntBASIC4.69□□□□□ -1.66
IFT140Q96RY7 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.69□□□□□ -1.66
IFT140Q96RY7 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
IFT140Q96RY7 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
IFT140Q96RY7 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.69□□□□□ -1.66
IFT140Q96RY7 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC4.69□□□□□ -1.66
IFT140Q96RY7 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.69□□□□□ -1.66
IFT140Q96RY7 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC4.69□□□□□ -1.66
IFT140Q96RY7 CTSLP2-204ENST00000629029 392 ntBASIC4.69□□□□□ -1.66
IFT140Q96RY7 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC4.69□□□□□ -1.66
IFT140Q96RY7 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
IFT140Q96RY7 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.69□□□□□ -1.66
IFT140Q96RY7 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC4.69□□□□□ -1.66
IFT140Q96RY7 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.69□□□□□ -1.66
IFT140Q96RY7 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
IFT140Q96RY7 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
IFT140Q96RY7 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
IFT140Q96RY7 AP002088.1-201ENST00000382740 395 ntBASIC4.69□□□□□ -1.66
IFT140Q96RY7 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
IFT140Q96RY7 RPL7P10-201ENST00000417407 739 ntBASIC4.69□□□□□ -1.66
IFT140Q96RY7 ISCA1P2-201ENST00000438679 421 ntBASIC4.69□□□□□ -1.66
IFT140Q96RY7 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.69□□□□□ -1.66
IFT140Q96RY7 RPS4XP6-201ENST00000477670 797 ntBASIC4.69□□□□□ -1.66
IFT140Q96RY7 SUMO2P4-201ENST00000504193 276 ntBASIC4.69□□□□□ -1.66
IFT140Q96RY7 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
IFT140Q96RY7 AC018797.3-201ENST00000513388 1241 ntBASIC4.69□□□□□ -1.66
IFT140Q96RY7 AC009159.1-201ENST00000618386 642 ntBASIC4.69□□□□□ -1.66
IFT140Q96RY7 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.68□□□□□ -1.66
IFT140Q96RY7 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
IFT140Q96RY7 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
IFT140Q96RY7 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
IFT140Q96RY7 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC4.68□□□□□ -1.66
IFT140Q96RY7 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC4.68□□□□□ -1.66
IFT140Q96RY7 TGIF1P1-201ENST00000558095 802 ntBASIC4.68□□□□□ -1.66
IFT140Q96RY7 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC4.68□□□□□ -1.66
IFT140Q96RY7 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.68□□□□□ -1.66
IFT140Q96RY7 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
IFT140Q96RY7 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
IFT140Q96RY7 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC4.67□□□□□ -1.66
IFT140Q96RY7 RNA5SP289-201ENST00000362332 137 ntBASIC4.67□□□□□ -1.66
IFT140Q96RY7 RNU6-482P-201ENST00000391068 107 ntBASIC4.67□□□□□ -1.66
IFT140Q96RY7 RN7SKP223-201ENST00000410582 62 ntBASIC4.67□□□□□ -1.66
IFT140Q96RY7 RNU6-55P-201ENST00000411092 107 ntBASIC4.67□□□□□ -1.66
IFT140Q96RY7 RNA5SP31-201ENST00000411144 127 ntBASIC4.67□□□□□ -1.66
IFT140Q96RY7 RNU6-954P-201ENST00000411355 107 ntBASIC4.67□□□□□ -1.66
IFT140Q96RY7 HMGB3P12-201ENST00000438745 556 ntBASIC4.67□□□□□ -1.66
IFT140Q96RY7 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC4.67□□□□□ -1.66
IFT140Q96RY7 SNORA31.21-201ENST00000517180 77 ntBASIC4.67□□□□□ -1.66
IFT140Q96RY7 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.67□□□□□ -1.66
IFT140Q96RY7 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.67□□□□□ -1.66
IFT140Q96RY7 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.67□□□□□ -1.66
IFT140Q96RY7 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.67□□□□□ -1.66
IFT140Q96RY7 AL356274.1-201ENST00000617064 410 ntBASIC4.67□□□□□ -1.66
IFT140Q96RY7 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
IFT140Q96RY7 AC027287.1-201ENST00000553115 1453 ntBASIC4.66□□□□□ -1.66
IFT140Q96RY7 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
IFT140Q96RY7 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
IFT140Q96RY7 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
IFT140Q96RY7 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.66□□□□□ -1.66
IFT140Q96RY7 AC078785.3-201ENST00000476607 425 ntBASIC4.66□□□□□ -1.66
IFT140Q96RY7 RNU4ATAC3P-201ENST00000516699 126 ntBASIC4.66□□□□□ -1.66
IFT140Q96RY7 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
IFT140Q96RY7 AL365400.2-201ENST00000605604 902 ntBASIC4.66□□□□□ -1.66
IFT140Q96RY7 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
IFT140Q96RY7 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
IFT140Q96RY7 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
IFT140Q96RY7 RNU6-618P-201ENST00000363518 112 ntBASIC4.65□□□□□ -1.66
IFT140Q96RY7 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
IFT140Q96RY7 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
IFT140Q96RY7 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
IFT140Q96RY7 RPS20P5-201ENST00000434808 360 ntBASIC4.65□□□□□ -1.66
IFT140Q96RY7 AC002553.2-201ENST00000453217 340 ntBASIC4.65□□□□□ -1.66
IFT140Q96RY7 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.65□□□□□ -1.66
IFT140Q96RY7 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC4.65□□□□□ -1.66
IFT140Q96RY7 RPS26P24-201ENST00000497656 331 ntBASIC4.65□□□□□ -1.66
IFT140Q96RY7 RNA5SP282-201ENST00000516355 108 ntBASIC4.65□□□□□ -1.66
IFT140Q96RY7 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.65□□□□□ -1.66
IFT140Q96RY7 AC025034.2-201ENST00000623264 286 ntBASIC4.65□□□□□ -1.66
IFT140Q96RY7 AC103798.2-201ENST00000624292 632 ntBASIC4.65□□□□□ -1.66
IFT140Q96RY7 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
IFT140Q96RY7 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC4.64□□□□□ -1.67
IFT140Q96RY7 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
IFT140Q96RY7 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.64□□□□□ -1.67
IFT140Q96RY7 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
IFT140Q96RY7 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
IFT140Q96RY7 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
IFT140Q96RY7 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
IFT140Q96RY7 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
IFT140Q96RY7 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
IFT140Q96RY7 AL356057.3-201ENST00000402607 340 ntBASIC4.64□□□□□ -1.67
IFT140Q96RY7 RNU6ATAC37P-201ENST00000408328 131 ntBASIC4.64□□□□□ -1.67
IFT140Q96RY7 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC4.64□□□□□ -1.67
IFT140Q96RY7 FGF7P3-201ENST00000454645 303 ntBASIC4.64□□□□□ -1.67
IFT140Q96RY7 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
IFT140Q96RY7 AC008565.1-201ENST00000509046 885 ntBASIC4.64□□□□□ -1.67
IFT140Q96RY7 DNAJC19P3-201ENST00000594491 331 ntBASIC4.64□□□□□ -1.67
IFT140Q96RY7 AC078899.3-201ENST00000599065 212 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms