Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 AC091152.2-201ENST00000591628 2569 ntBASIC3.65□□□□□ -1.82
RPRD1AQ96P16 AC073073.2-201ENST00000609827 2578 ntBASIC3.65□□□□□ -1.82
RPRD1AQ96P16 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
RPRD1AQ96P16 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
RPRD1AQ96P16 MTCO1P24-201ENST00000515438 1558 ntBASIC3.65□□□□□ -1.82
RPRD1AQ96P16 CEP170P1-201ENST00000502249 4587 ntBASIC3.65□□□□□ -1.82
RPRD1AQ96P16 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
RPRD1AQ96P16 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
RPRD1AQ96P16 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
RPRD1AQ96P16 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
RPRD1AQ96P16 U3.39-201ENST00000408569 239 ntBASIC3.65□□□□□ -1.83
RPRD1AQ96P16 RPL31P2-201ENST00000413849 377 ntBASIC3.65□□□□□ -1.83
RPRD1AQ96P16 AC006989.1-201ENST00000427212 131 ntBASIC3.65□□□□□ -1.83
RPRD1AQ96P16 AC073508.1-201ENST00000428866 656 ntBASIC3.65□□□□□ -1.83
RPRD1AQ96P16 OR51AB1P-201ENST00000429046 620 ntBASIC3.65□□□□□ -1.83
RPRD1AQ96P16 CKS1BP5-201ENST00000434172 273 ntBASIC3.65□□□□□ -1.83
RPRD1AQ96P16 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.65□□□□□ -1.83
RPRD1AQ96P16 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.65□□□□□ -1.83
RPRD1AQ96P16 SKP1P1-201ENST00000438081 489 ntBASIC3.65□□□□□ -1.83
RPRD1AQ96P16 AC092641.1-201ENST00000440229 772 ntBASIC3.65□□□□□ -1.83
RPRD1AQ96P16 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.65□□□□□ -1.83
RPRD1AQ96P16 AC004865.1-201ENST00000442276 1003 ntBASIC3.65□□□□□ -1.83
RPRD1AQ96P16 RPL23AP33-201ENST00000442301 452 ntBASIC3.65□□□□□ -1.83
RPRD1AQ96P16 RPS26P30-201ENST00000443431 335 ntBASIC3.65□□□□□ -1.83
RPRD1AQ96P16 AC233982.1-201ENST00000451247 436 ntBASIC3.65□□□□□ -1.83
RPRD1AQ96P16 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.65□□□□□ -1.83
RPRD1AQ96P16 AC023598.1-201ENST00000472521 361 ntBASIC3.65□□□□□ -1.83
RPRD1AQ96P16 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.65□□□□□ -1.83
RPRD1AQ96P16 AC110768.1-201ENST00000509222 400 ntBASIC3.65□□□□□ -1.83
RPRD1AQ96P16 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.65□□□□□ -1.83
RPRD1AQ96P16 AC093755.1-201ENST00000512950 1023 ntBASIC3.65□□□□□ -1.83
RPRD1AQ96P16 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.65□□□□□ -1.83
RPRD1AQ96P16 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.65□□□□□ -1.83
RPRD1AQ96P16 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
RPRD1AQ96P16 SERPINE4P-201ENST00000554978 281 ntBASIC3.65□□□□□ -1.83
RPRD1AQ96P16 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.65□□□□□ -1.83
RPRD1AQ96P16 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.65□□□□□ -1.83
RPRD1AQ96P16 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.83
RPRD1AQ96P16 AC008687.2-201ENST00000597865 520 ntBASIC3.65□□□□□ -1.83
RPRD1AQ96P16 ZNF92P2-201ENST00000600543 1059 ntBASIC3.65□□□□□ -1.83
RPRD1AQ96P16 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.65□□□□□ -1.83
RPRD1AQ96P16 AL450489.1-201ENST00000612071 468 ntBASIC3.65□□□□□ -1.83
RPRD1AQ96P16 AC073569.3-201ENST00000619055 682 ntBASIC3.65□□□□□ -1.83
RPRD1AQ96P16 MIR6075-201ENST00000620782 95 ntBASIC3.65□□□□□ -1.83
RPRD1AQ96P16 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3.65□□□□□ -1.83
RPRD1AQ96P16 AC092608.3-201ENST00000625017 386 ntBASIC3.65□□□□□ -1.83
RPRD1AQ96P16 AL590396.2-201ENST00000636511 1041 ntBASIC3.65□□□□□ -1.83
RPRD1AQ96P16 AC017104.5-201ENST00000637647 639 ntBASIC3.65□□□□□ -1.83
RPRD1AQ96P16 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.65□□□□□ -1.83
RPRD1AQ96P16 ZNF826P-207ENST00000622273 1910 ntBASIC3.65□□□□□ -1.83
RPRD1AQ96P16 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
RPRD1AQ96P16 AC046144.1-201ENST00000478559 1853 ntBASIC3.64□□□□□ -1.83
RPRD1AQ96P16 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RPRD1AQ96P16 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RPRD1AQ96P16 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.64□□□□□ -1.83
RPRD1AQ96P16 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.64□□□□□ -1.83
RPRD1AQ96P16 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.64□□□□□ -1.83
RPRD1AQ96P16 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RPRD1AQ96P16 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RPRD1AQ96P16 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RPRD1AQ96P16 FRG1CP-201ENST00000358464 769 ntBASIC3.64□□□□□ -1.83
RPRD1AQ96P16 SNORA71.3-201ENST00000362582 128 ntBASIC3.64□□□□□ -1.83
RPRD1AQ96P16 RNU6-1339P-201ENST00000363574 91 ntBASIC3.64□□□□□ -1.83
RPRD1AQ96P16 RNA5SP42-201ENST00000364278 115 ntBASIC3.64□□□□□ -1.83
RPRD1AQ96P16 MIR607-201ENST00000385241 96 ntBASIC3.64□□□□□ -1.83
RPRD1AQ96P16 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
RPRD1AQ96P16 BTBD10P2-201ENST00000404779 676 ntBASIC3.64□□□□□ -1.83
RPRD1AQ96P16 RN7SKP53-201ENST00000411337 315 ntBASIC3.64□□□□□ -1.83
RPRD1AQ96P16 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.64□□□□□ -1.83
RPRD1AQ96P16 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.64□□□□□ -1.83
RPRD1AQ96P16 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.64□□□□□ -1.83
RPRD1AQ96P16 MTND4P22-201ENST00000413116 1169 ntBASIC3.64□□□□□ -1.83
RPRD1AQ96P16 CRYBB2P1-203ENST00000415709 538 ntBASIC3.64□□□□□ -1.83
RPRD1AQ96P16 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.64□□□□□ -1.83
RPRD1AQ96P16 NEK4P1-201ENST00000433383 879 ntBASIC3.64□□□□□ -1.83
RPRD1AQ96P16 SETP5-201ENST00000437270 562 ntBASIC3.64□□□□□ -1.83
RPRD1AQ96P16 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.64□□□□□ -1.83
RPRD1AQ96P16 Z77249.1-201ENST00000444622 1175 ntBASIC3.64□□□□□ -1.83
RPRD1AQ96P16 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.64□□□□□ -1.83
RPRD1AQ96P16 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.64□□□□□ -1.83
RPRD1AQ96P16 MTND2P30-201ENST00000456663 382 ntBASIC3.64□□□□□ -1.83
RPRD1AQ96P16 AC015724.1-201ENST00000478577 156 ntBASIC3.64□□□□□ -1.83
RPRD1AQ96P16 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC3.64□□□□□ -1.83
RPRD1AQ96P16 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.64□□□□□ -1.83
RPRD1AQ96P16 AC010468.3-201ENST00000508225 458 ntBASIC3.64□□□□□ -1.83
RPRD1AQ96P16 RNU6-1102P-201ENST00000516149 96 ntBASIC3.64□□□□□ -1.83
RPRD1AQ96P16 RNU2-27P-201ENST00000516185 142 ntBASIC3.64□□□□□ -1.83
RPRD1AQ96P16 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC3.64□□□□□ -1.83
RPRD1AQ96P16 AP000926.4-201ENST00000527351 454 ntBASIC3.64□□□□□ -1.83
RPRD1AQ96P16 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.64□□□□□ -1.83
RPRD1AQ96P16 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.64□□□□□ -1.83
RPRD1AQ96P16 AC104229.1-201ENST00000561364 255 ntBASIC3.64□□□□□ -1.83
RPRD1AQ96P16 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.64□□□□□ -1.83
RPRD1AQ96P16 YWHAQP7-201ENST00000603536 658 ntBASIC3.64□□□□□ -1.83
RPRD1AQ96P16 AC091488.1-201ENST00000604239 660 ntBASIC3.64□□□□□ -1.83
RPRD1AQ96P16 AC092354.2-201ENST00000607786 514 ntBASIC3.64□□□□□ -1.83
RPRD1AQ96P16 AC008121.2-201ENST00000614647 523 ntBASIC3.64□□□□□ -1.83
RPRD1AQ96P16 AC244258.1-201ENST00000637553 1071 ntBASIC3.64□□□□□ -1.83
RPRD1AQ96P16 AL392088.2-201ENST00000637607 285 ntBASIC3.64□□□□□ -1.83
RPRD1AQ96P16 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms