Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC6.88□□□□□ -1.31
LRCH3Q96II8 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
LRCH3Q96II8 CAST-202ENST00000325674 3356 ntTSL 5 BASIC6.88□□□□□ -1.31
LRCH3Q96II8 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
LRCH3Q96II8 NXPH1-205ENST00000602349 1953 ntBASIC6.88□□□□□ -1.31
LRCH3Q96II8 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
LRCH3Q96II8 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
LRCH3Q96II8 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
LRCH3Q96II8 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC6.87□□□□□ -1.31
LRCH3Q96II8 AC134882.1-201ENST00000603738 1676 ntBASIC6.87□□□□□ -1.31
LRCH3Q96II8 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC6.87□□□□□ -1.31
LRCH3Q96II8 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
LRCH3Q96II8 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.87□□□□□ -1.31
LRCH3Q96II8 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC6.87□□□□□ -1.31
LRCH3Q96II8 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
LRCH3Q96II8 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
LRCH3Q96II8 RNU1-134P-201ENST00000362935 165 ntBASIC6.87□□□□□ -1.31
LRCH3Q96II8 RNA5SP346-201ENST00000363541 121 ntBASIC6.87□□□□□ -1.31
LRCH3Q96II8 Y_RNA.183-201ENST00000363882 113 ntBASIC6.87□□□□□ -1.31
LRCH3Q96II8 Y_RNA.471-201ENST00000384312 102 ntBASIC6.87□□□□□ -1.31
LRCH3Q96II8 HMGB3P7-201ENST00000400214 611 ntBASIC6.87□□□□□ -1.31
LRCH3Q96II8 MRPL35P1-201ENST00000404272 572 ntBASIC6.87□□□□□ -1.31
LRCH3Q96II8 FAR2P4-202ENST00000425399 584 ntBASIC6.87□□□□□ -1.31
LRCH3Q96II8 PSMA2P3-201ENST00000429685 675 ntBASIC6.87□□□□□ -1.31
LRCH3Q96II8 CFL1P1-202ENST00000432948 411 ntBASIC6.87□□□□□ -1.31
LRCH3Q96II8 RPL21P112-201ENST00000434403 463 ntBASIC6.87□□□□□ -1.31
LRCH3Q96II8 RPS3AP46-201ENST00000448352 682 ntBASIC6.87□□□□□ -1.31
LRCH3Q96II8 RNU7-167P-201ENST00000459160 62 ntBASIC6.87□□□□□ -1.31
LRCH3Q96II8 AC091153.1-201ENST00000466297 402 ntBASIC6.87□□□□□ -1.31
LRCH3Q96II8 RN7SL808P-201ENST00000496066 299 ntBASIC6.87□□□□□ -1.31
LRCH3Q96II8 AC008716.1-201ENST00000511084 513 ntBASIC6.87□□□□□ -1.31
LRCH3Q96II8 RNU7-200P-201ENST00000516105 62 ntBASIC6.87□□□□□ -1.31
LRCH3Q96II8 SCARNA18.1-201ENST00000516330 83 ntBASIC6.87□□□□□ -1.31
LRCH3Q96II8 RNU6-861P-201ENST00000516745 106 ntBASIC6.87□□□□□ -1.31
LRCH3Q96II8 CYCSP22-201ENST00000517555 339 ntBASIC6.87□□□□□ -1.31
LRCH3Q96II8 DEFB108E-201ENST00000524692 240 ntBASIC6.87□□□□□ -1.31
LRCH3Q96II8 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
LRCH3Q96II8 GSTP1P1-201ENST00000548078 319 ntBASIC6.87□□□□□ -1.31
LRCH3Q96II8 AC127381.1-201ENST00000555979 939 ntBASIC6.87□□□□□ -1.31
LRCH3Q96II8 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC6.87□□□□□ -1.31
LRCH3Q96II8 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC6.87□□□□□ -1.31
LRCH3Q96II8 FO393422.1-201ENST00000603908 708 ntBASIC6.87□□□□□ -1.31
LRCH3Q96II8 AC008162.1-201ENST00000604718 254 ntBASIC6.87□□□□□ -1.31
LRCH3Q96II8 AL670379.4-201ENST00000605279 254 ntBASIC6.87□□□□□ -1.31
LRCH3Q96II8 AC097467.4-201ENST00000605504 141 ntBASIC6.87□□□□□ -1.31
LRCH3Q96II8 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC6.87□□□□□ -1.31
LRCH3Q96II8 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC6.87□□□□□ -1.31
LRCH3Q96II8 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
LRCH3Q96II8 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
LRCH3Q96II8 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
LRCH3Q96II8 Z95327.2-201ENST00000414579 1873 ntBASIC6.87□□□□□ -1.31
LRCH3Q96II8 AC107980.1-201ENST00000558671 3355 ntBASIC6.87□□□□□ -1.31
LRCH3Q96II8 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
LRCH3Q96II8 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
LRCH3Q96II8 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC6.87□□□□□ -1.31
LRCH3Q96II8 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
LRCH3Q96II8 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC6.87□□□□□ -1.31
LRCH3Q96II8 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC6.87□□□□□ -1.31
LRCH3Q96II8 ZNF285B-201ENST00000561698 1767 ntBASIC6.87□□□□□ -1.31
LRCH3Q96II8 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.87□□□□□ -1.31
LRCH3Q96II8 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
LRCH3Q96II8 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
LRCH3Q96II8 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC6.86□□□□□ -1.31
LRCH3Q96II8 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
LRCH3Q96II8 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
LRCH3Q96II8 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
LRCH3Q96II8 ZNF33CP-201ENST00000432492 2030 ntBASIC6.86□□□□□ -1.31
LRCH3Q96II8 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
LRCH3Q96II8 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
LRCH3Q96II8 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
LRCH3Q96II8 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
LRCH3Q96II8 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
LRCH3Q96II8 AC103710.2-202ENST00000641454 2853 ntBASIC6.86□□□□□ -1.31
LRCH3Q96II8 HSPA8P1-201ENST00000425843 1833 ntBASIC6.86□□□□□ -1.31
LRCH3Q96II8 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
LRCH3Q96II8 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
LRCH3Q96II8 MIR411-201ENST00000362239 96 ntBASIC6.86□□□□□ -1.31
LRCH3Q96II8 RNA5SP258-201ENST00000362750 119 ntBASIC6.86□□□□□ -1.31
LRCH3Q96II8 RNU6-1266P-201ENST00000362794 105 ntBASIC6.86□□□□□ -1.31
LRCH3Q96II8 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC6.86□□□□□ -1.31
LRCH3Q96II8 Y_RNA.399-201ENST00000383955 105 ntBASIC6.86□□□□□ -1.31
LRCH3Q96II8 MIR649-201ENST00000384843 97 ntBASIC6.86□□□□□ -1.31
LRCH3Q96II8 MIR215-201ENST00000384858 110 ntBASIC6.86□□□□□ -1.31
LRCH3Q96II8 RNU6-278P-201ENST00000390945 109 ntBASIC6.86□□□□□ -1.31
LRCH3Q96II8 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC6.86□□□□□ -1.31
LRCH3Q96II8 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.86□□□□□ -1.31
LRCH3Q96II8 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.86□□□□□ -1.31
LRCH3Q96II8 AC096920.1-201ENST00000423991 241 ntBASIC6.86□□□□□ -1.31
LRCH3Q96II8 AC005077.1-201ENST00000449226 375 ntBASIC6.86□□□□□ -1.31
LRCH3Q96II8 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC6.86□□□□□ -1.31
LRCH3Q96II8 AC005229.2-201ENST00000456995 399 ntBASIC6.86□□□□□ -1.31
LRCH3Q96II8 RNU7-169P-201ENST00000459456 61 ntBASIC6.86□□□□□ -1.31
LRCH3Q96II8 AC006967.1-201ENST00000467608 589 ntBASIC6.86□□□□□ -1.31
LRCH3Q96II8 RN7SL369P-201ENST00000477138 299 ntBASIC6.86□□□□□ -1.31
LRCH3Q96II8 RPS4XP23-201ENST00000487801 237 ntBASIC6.86□□□□□ -1.31
LRCH3Q96II8 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC6.86□□□□□ -1.31
LRCH3Q96II8 KHDC1P1-201ENST00000511053 508 ntBASIC6.86□□□□□ -1.31
LRCH3Q96II8 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC6.86□□□□□ -1.31
LRCH3Q96II8 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC6.86□□□□□ -1.31
LRCH3Q96II8 STX3-204ENST00000530221 534 ntTSL 5 BASIC6.86□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 144.5 ms