Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RNF31Q96EP0 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
RNF31Q96EP0 U8.14-201ENST00000390843 143 ntBASIC4.7□□□□□ -1.66
RNF31Q96EP0 CIR1P3-201ENST00000405137 479 ntBASIC4.7□□□□□ -1.66
RNF31Q96EP0 U3.32-201ENST00000408116 212 ntBASIC4.7□□□□□ -1.66
RNF31Q96EP0 AC073264.1-201ENST00000411508 416 ntBASIC4.7□□□□□ -1.66
RNF31Q96EP0 USP9YP6-201ENST00000413550 854 ntBASIC4.7□□□□□ -1.66
RNF31Q96EP0 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.7□□□□□ -1.66
RNF31Q96EP0 AC234782.4-201ENST00000417646 1048 ntBASIC4.7□□□□□ -1.66
RNF31Q96EP0 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC4.7□□□□□ -1.66
RNF31Q96EP0 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC4.7□□□□□ -1.66
RNF31Q96EP0 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.7□□□□□ -1.66
RNF31Q96EP0 PGBD4P3-201ENST00000440731 581 ntBASIC4.7□□□□□ -1.66
RNF31Q96EP0 OR7E125P-201ENST00000443450 846 ntBASIC4.7□□□□□ -1.66
RNF31Q96EP0 RPL21P133-201ENST00000443666 476 ntBASIC4.7□□□□□ -1.66
RNF31Q96EP0 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC4.7□□□□□ -1.66
RNF31Q96EP0 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RNF31Q96EP0 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.7□□□□□ -1.66
RNF31Q96EP0 RGS5-217ENST00000451759 835 ntTSL 3 BASIC4.7□□□□□ -1.66
RNF31Q96EP0 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.7□□□□□ -1.66
RNF31Q96EP0 USP9YP34-201ENST00000453983 808 ntBASIC4.7□□□□□ -1.66
RNF31Q96EP0 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.7□□□□□ -1.66
RNF31Q96EP0 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.7□□□□□ -1.66
RNF31Q96EP0 RPL31P58-201ENST00000469001 379 ntBASIC4.7□□□□□ -1.66
RNF31Q96EP0 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
RNF31Q96EP0 AC021678.1-201ENST00000505195 936 ntBASIC4.7□□□□□ -1.66
RNF31Q96EP0 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.7□□□□□ -1.66
RNF31Q96EP0 AC093809.1-201ENST00000509155 340 ntBASIC4.7□□□□□ -1.66
RNF31Q96EP0 RN7SKP276-201ENST00000516242 268 ntBASIC4.7□□□□□ -1.66
RNF31Q96EP0 RNU6-528P-201ENST00000516926 100 ntBASIC4.7□□□□□ -1.66
RNF31Q96EP0 RNU6-430P-201ENST00000517078 107 ntBASIC4.7□□□□□ -1.66
RNF31Q96EP0 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
RNF31Q96EP0 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC4.7□□□□□ -1.66
RNF31Q96EP0 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC4.7□□□□□ -1.66
RNF31Q96EP0 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.7□□□□□ -1.66
RNF31Q96EP0 AC006349.1-201ENST00000555526 235 ntBASIC4.7□□□□□ -1.66
RNF31Q96EP0 MIR4737-201ENST00000583979 81 ntBASIC4.7□□□□□ -1.66
RNF31Q96EP0 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.7□□□□□ -1.66
RNF31Q96EP0 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.7□□□□□ -1.66
RNF31Q96EP0 AC243773.3-201ENST00000613270 256 ntBASIC4.7□□□□□ -1.66
RNF31Q96EP0 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.7□□□□□ -1.66
RNF31Q96EP0 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.7□□□□□ -1.66
RNF31Q96EP0 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.7□□□□□ -1.66
RNF31Q96EP0 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.7□□□□□ -1.66
RNF31Q96EP0 AC092794.2-201ENST00000620933 563 ntBASIC4.7□□□□□ -1.66
RNF31Q96EP0 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RNF31Q96EP0 AC093535.2-201ENST00000624769 2326 ntBASIC4.7□□□□□ -1.66
RNF31Q96EP0 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RNF31Q96EP0 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.7□□□□□ -1.66
RNF31Q96EP0 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
RNF31Q96EP0 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.7□□□□□ -1.66
RNF31Q96EP0 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
RNF31Q96EP0 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
RNF31Q96EP0 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
RNF31Q96EP0 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
RNF31Q96EP0 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
RNF31Q96EP0 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
RNF31Q96EP0 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RNF31Q96EP0 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
RNF31Q96EP0 AC025125.1-201ENST00000624743 1922 ntBASIC4.7□□□□□ -1.66
RNF31Q96EP0 DCAF13P1-201ENST00000495256 1330 ntBASIC4.7□□□□□ -1.66
RNF31Q96EP0 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RNF31Q96EP0 PHKBP1-201ENST00000450951 1951 ntBASIC4.69□□□□□ -1.66
RNF31Q96EP0 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
RNF31Q96EP0 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
RNF31Q96EP0 OR4A15-201ENST00000314706 1035 ntBASIC4.69□□□□□ -1.66
RNF31Q96EP0 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
RNF31Q96EP0 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RNF31Q96EP0 RPS3AP23-201ENST00000401762 784 ntBASIC4.69□□□□□ -1.66
RNF31Q96EP0 RPS3AP24-201ENST00000407896 734 ntBASIC4.69□□□□□ -1.66
RNF31Q96EP0 Y_RNA.598-201ENST00000410480 95 ntBASIC4.69□□□□□ -1.66
RNF31Q96EP0 RNA5SP113-201ENST00000410486 84 ntBASIC4.69□□□□□ -1.66
RNF31Q96EP0 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.69□□□□□ -1.66
RNF31Q96EP0 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC4.69□□□□□ -1.66
RNF31Q96EP0 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.69□□□□□ -1.66
RNF31Q96EP0 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.69□□□□□ -1.66
RNF31Q96EP0 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
RNF31Q96EP0 AC010881.1-201ENST00000433830 235 ntBASIC4.69□□□□□ -1.66
RNF31Q96EP0 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4.69□□□□□ -1.66
RNF31Q96EP0 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.69□□□□□ -1.66
RNF31Q96EP0 HMGB1P31-201ENST00000437242 427 ntBASIC4.69□□□□□ -1.66
RNF31Q96EP0 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.69□□□□□ -1.66
RNF31Q96EP0 AC092013.1-201ENST00000438795 332 ntBASIC4.69□□□□□ -1.66
RNF31Q96EP0 ACTR3P2-201ENST00000439585 1257 ntBASIC4.69□□□□□ -1.66
RNF31Q96EP0 HMGB3P9-201ENST00000441799 583 ntBASIC4.69□□□□□ -1.66
RNF31Q96EP0 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RNF31Q96EP0 MTCO1P27-201ENST00000448269 226 ntBASIC4.69□□□□□ -1.66
RNF31Q96EP0 USP9YP12-201ENST00000450481 570 ntBASIC4.69□□□□□ -1.66
RNF31Q96EP0 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
RNF31Q96EP0 AC013267.1-201ENST00000458227 267 ntBASIC4.69□□□□□ -1.66
RNF31Q96EP0 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
RNF31Q96EP0 MEMO1P3-201ENST00000459811 302 ntBASIC4.69□□□□□ -1.66
RNF31Q96EP0 RPS3AP17-201ENST00000472594 777 ntBASIC4.69□□□□□ -1.66
RNF31Q96EP0 RPS24P16-201ENST00000497294 392 ntBASIC4.69□□□□□ -1.66
RNF31Q96EP0 OR51K1P-201ENST00000510214 950 ntBASIC4.69□□□□□ -1.66
RNF31Q96EP0 KCTD9P2-201ENST00000512203 1013 ntBASIC4.69□□□□□ -1.66
RNF31Q96EP0 AF131216.2-201ENST00000512316 564 ntBASIC4.69□□□□□ -1.66
RNF31Q96EP0 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.69□□□□□ -1.66
RNF31Q96EP0 ARL2BPP6-201ENST00000512757 439 ntBASIC4.69□□□□□ -1.66
RNF31Q96EP0 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms