Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 RNU1-130P-201ENST00000363930 160 ntBASIC5.3□□□□□ -1.56
CHMP4CQ96CF2 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CHMP4CQ96CF2 SNORA74C-2-201ENST00000411179 201 ntBASIC5.3□□□□□ -1.56
CHMP4CQ96CF2 OR8G2P-201ENST00000412796 908 ntBASIC5.3□□□□□ -1.56
CHMP4CQ96CF2 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC5.3□□□□□ -1.56
CHMP4CQ96CF2 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CHMP4CQ96CF2 BMS1P19-201ENST00000433925 393 ntBASIC5.3□□□□□ -1.56
CHMP4CQ96CF2 RPL21P133-201ENST00000443666 476 ntBASIC5.3□□□□□ -1.56
CHMP4CQ96CF2 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC5.3□□□□□ -1.56
CHMP4CQ96CF2 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC5.3□□□□□ -1.56
CHMP4CQ96CF2 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC5.3□□□□□ -1.56
CHMP4CQ96CF2 RPS26P28-201ENST00000470806 348 ntBASIC5.3□□□□□ -1.56
CHMP4CQ96CF2 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.3□□□□□ -1.56
CHMP4CQ96CF2 AC090013.1-201ENST00000485147 480 ntBASIC5.3□□□□□ -1.56
CHMP4CQ96CF2 AC093267.1-201ENST00000489176 961 ntBASIC5.3□□□□□ -1.56
CHMP4CQ96CF2 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC5.3□□□□□ -1.56
CHMP4CQ96CF2 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC5.3□□□□□ -1.56
CHMP4CQ96CF2 AC114981.1-201ENST00000503897 678 ntBASIC5.3□□□□□ -1.56
CHMP4CQ96CF2 AC005178.1-201ENST00000508392 440 ntBASIC5.3□□□□□ -1.56
CHMP4CQ96CF2 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC5.3□□□□□ -1.56
CHMP4CQ96CF2 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.3□□□□□ -1.56
CHMP4CQ96CF2 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC5.3□□□□□ -1.56
CHMP4CQ96CF2 AP000827.1-201ENST00000527814 258 ntBASIC5.3□□□□□ -1.56
CHMP4CQ96CF2 AC100770.1-201ENST00000532310 322 ntBASIC5.3□□□□□ -1.56
CHMP4CQ96CF2 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.3□□□□□ -1.56
CHMP4CQ96CF2 AKIRIN1P1-201ENST00000547384 544 ntBASIC5.3□□□□□ -1.56
CHMP4CQ96CF2 MIR4637-201ENST00000582405 84 ntBASIC5.3□□□□□ -1.56
CHMP4CQ96CF2 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC5.3□□□□□ -1.56
CHMP4CQ96CF2 AL590229.1-201ENST00000603497 542 ntBASIC5.3□□□□□ -1.56
CHMP4CQ96CF2 AC012409.3-201ENST00000611343 981 ntBASIC5.3□□□□□ -1.56
CHMP4CQ96CF2 AP005019.3-201ENST00000620418 560 ntBASIC5.3□□□□□ -1.56
CHMP4CQ96CF2 AC067931.1-201ENST00000624190 671 ntBASIC5.3□□□□□ -1.56
CHMP4CQ96CF2 AC007494.3-201ENST00000624660 743 ntBASIC5.3□□□□□ -1.56
CHMP4CQ96CF2 AC006065.6-201ENST00000625201 545 ntBASIC5.3□□□□□ -1.56
CHMP4CQ96CF2 FP325313.1-201ENST00000638228 703 ntBASIC5.3□□□□□ -1.56
CHMP4CQ96CF2 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.3□□□□□ -1.56
CHMP4CQ96CF2 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.3□□□□□ -1.56
CHMP4CQ96CF2 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CHMP4CQ96CF2 AC139769.1-204ENST00000472297 1931 ntBASIC5.3□□□□□ -1.56
CHMP4CQ96CF2 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC5.3□□□□□ -1.56
CHMP4CQ96CF2 ELL2P3-201ENST00000457883 1602 ntBASIC5.3□□□□□ -1.56
CHMP4CQ96CF2 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CHMP4CQ96CF2 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CHMP4CQ96CF2 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.29□□□□□ -1.56
CHMP4CQ96CF2 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CHMP4CQ96CF2 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC5.29□□□□□ -1.56
CHMP4CQ96CF2 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CHMP4CQ96CF2 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.29□□□□□ -1.56
CHMP4CQ96CF2 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
CHMP4CQ96CF2 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CHMP4CQ96CF2 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
CHMP4CQ96CF2 RNU1-63P-201ENST00000383902 164 ntBASIC5.29□□□□□ -1.56
CHMP4CQ96CF2 SNORA51.6-201ENST00000384151 125 ntBASIC5.29□□□□□ -1.56
CHMP4CQ96CF2 SNORD116-1-201ENST00000384335 95 ntBASIC5.29□□□□□ -1.56
CHMP4CQ96CF2 RAB28P1-201ENST00000411517 641 ntBASIC5.29□□□□□ -1.56
CHMP4CQ96CF2 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC5.29□□□□□ -1.56
CHMP4CQ96CF2 AL953862.1-201ENST00000423016 168 ntBASIC5.29□□□□□ -1.56
CHMP4CQ96CF2 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC5.29□□□□□ -1.56
CHMP4CQ96CF2 ELOCP8-201ENST00000439309 332 ntBASIC5.29□□□□□ -1.56
CHMP4CQ96CF2 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC5.29□□□□□ -1.56
CHMP4CQ96CF2 ELOCP15-201ENST00000442090 332 ntBASIC5.29□□□□□ -1.56
CHMP4CQ96CF2 TPT1P12-201ENST00000448968 492 ntBASIC5.29□□□□□ -1.56
CHMP4CQ96CF2 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC5.29□□□□□ -1.56
CHMP4CQ96CF2 AC097493.1-201ENST00000463958 372 ntBASIC5.29□□□□□ -1.56
CHMP4CQ96CF2 RPS15AP17-201ENST00000470598 390 ntBASIC5.29□□□□□ -1.56
CHMP4CQ96CF2 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC5.29□□□□□ -1.56
CHMP4CQ96CF2 AC093840.1-201ENST00000511599 336 ntBASIC5.29□□□□□ -1.56
CHMP4CQ96CF2 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.29□□□□□ -1.56
CHMP4CQ96CF2 MTCYBP43-201ENST00000513621 740 ntBASIC5.29□□□□□ -1.56
CHMP4CQ96CF2 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC5.29□□□□□ -1.56
CHMP4CQ96CF2 AC090819.1-201ENST00000523800 1111 ntBASIC5.29□□□□□ -1.56
CHMP4CQ96CF2 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC5.29□□□□□ -1.56
CHMP4CQ96CF2 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC5.29□□□□□ -1.56
CHMP4CQ96CF2 CYCSP2-201ENST00000558168 301 ntBASIC5.29□□□□□ -1.56
CHMP4CQ96CF2 AC023575.1-201ENST00000580510 358 ntBASIC5.29□□□□□ -1.56
CHMP4CQ96CF2 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC5.29□□□□□ -1.56
CHMP4CQ96CF2 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC5.29□□□□□ -1.56
CHMP4CQ96CF2 AL596327.1-201ENST00000603629 213 ntBASIC5.29□□□□□ -1.56
CHMP4CQ96CF2 AC019193.2-201ENST00000610012 634 ntBASIC5.29□□□□□ -1.56
CHMP4CQ96CF2 5S_rRNA.16-201ENST00000612928 119 ntBASIC5.29□□□□□ -1.56
CHMP4CQ96CF2 AC008443.7-201ENST00000622195 246 ntBASIC5.29□□□□□ -1.56
CHMP4CQ96CF2 ALG13-230ENST00000623189 458 ntTSL 3 BASIC5.29□□□□□ -1.56
CHMP4CQ96CF2 AC073530.2-201ENST00000623987 261 ntBASIC5.29□□□□□ -1.56
CHMP4CQ96CF2 MIR6830-201ENST00000636015 70 ntBASIC5.29□□□□□ -1.56
CHMP4CQ96CF2 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC5.29□□□□□ -1.56
CHMP4CQ96CF2 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CHMP4CQ96CF2 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CHMP4CQ96CF2 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CHMP4CQ96CF2 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.28□□□□□ -1.56
CHMP4CQ96CF2 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC5.28□□□□□ -1.56
CHMP4CQ96CF2 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CHMP4CQ96CF2 RNU1-108P-201ENST00000362556 161 ntBASIC5.28□□□□□ -1.56
CHMP4CQ96CF2 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.28□□□□□ -1.56
CHMP4CQ96CF2 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC5.28□□□□□ -1.56
CHMP4CQ96CF2 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.28□□□□□ -1.56
CHMP4CQ96CF2 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC5.28□□□□□ -1.56
CHMP4CQ96CF2 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CHMP4CQ96CF2 AC104073.1-201ENST00000451988 151 ntBASIC5.28□□□□□ -1.56
CHMP4CQ96CF2 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CHMP4CQ96CF2 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms