Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 AC016542.1-201ENST00000608259 493 ntBASIC3.37□□□□□ -1.87
UBE2E3Q969T4 uc_338.32-201ENST00000615087 172 ntBASIC3.37□□□□□ -1.87
UBE2E3Q969T4 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
UBE2E3Q969T4 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.37□□□□□ -1.87
UBE2E3Q969T4 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
UBE2E3Q969T4 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
UBE2E3Q969T4 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
UBE2E3Q969T4 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
UBE2E3Q969T4 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
UBE2E3Q969T4 PABPC1P7-201ENST00000413177 1513 ntBASIC3.36□□□□□ -1.87
UBE2E3Q969T4 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
UBE2E3Q969T4 FRG1CP-201ENST00000358464 769 ntBASIC3.36□□□□□ -1.87
UBE2E3Q969T4 RNU6-444P-201ENST00000383988 108 ntBASIC3.36□□□□□ -1.87
UBE2E3Q969T4 MIR554-201ENST00000384874 96 ntBASIC3.36□□□□□ -1.87
UBE2E3Q969T4 FABP12P1-201ENST00000401911 322 ntBASIC3.36□□□□□ -1.87
UBE2E3Q969T4 MIR1250-201ENST00000408098 113 ntBASIC3.36□□□□□ -1.87
UBE2E3Q969T4 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.36□□□□□ -1.87
UBE2E3Q969T4 RPL31P2-201ENST00000413849 377 ntBASIC3.36□□□□□ -1.87
UBE2E3Q969T4 RPL30P2-201ENST00000414021 291 ntBASIC3.36□□□□□ -1.87
UBE2E3Q969T4 UBE2V1P9-201ENST00000414760 368 ntBASIC3.36□□□□□ -1.87
UBE2E3Q969T4 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC3.36□□□□□ -1.87
UBE2E3Q969T4 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.36□□□□□ -1.87
UBE2E3Q969T4 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.36□□□□□ -1.87
UBE2E3Q969T4 RPL17P36-201ENST00000420302 549 ntBASIC3.36□□□□□ -1.87
UBE2E3Q969T4 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.36□□□□□ -1.87
UBE2E3Q969T4 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.36□□□□□ -1.87
UBE2E3Q969T4 AC092017.2-201ENST00000427600 362 ntBASIC3.36□□□□□ -1.87
UBE2E3Q969T4 AL445584.1-201ENST00000431451 330 ntBASIC3.36□□□□□ -1.87
UBE2E3Q969T4 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
UBE2E3Q969T4 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC3.36□□□□□ -1.87
UBE2E3Q969T4 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.36□□□□□ -1.87
UBE2E3Q969T4 AL138799.3-201ENST00000438968 350 ntBASIC3.36□□□□□ -1.87
UBE2E3Q969T4 AL158053.1-201ENST00000441503 453 ntBASIC3.36□□□□□ -1.87
UBE2E3Q969T4 RPL21P133-201ENST00000443666 476 ntBASIC3.36□□□□□ -1.87
UBE2E3Q969T4 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.36□□□□□ -1.87
UBE2E3Q969T4 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
UBE2E3Q969T4 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.36□□□□□ -1.87
UBE2E3Q969T4 PRDX3P4-201ENST00000470828 747 ntBASIC3.36□□□□□ -1.87
UBE2E3Q969T4 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.36□□□□□ -1.87
UBE2E3Q969T4 AC092045.1-201ENST00000495716 1231 ntBASIC3.36□□□□□ -1.87
UBE2E3Q969T4 FCF1P3-201ENST00000496394 590 ntBASIC3.36□□□□□ -1.87
UBE2E3Q969T4 AC020893.1-201ENST00000502452 580 ntBASIC3.36□□□□□ -1.87
UBE2E3Q969T4 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.36□□□□□ -1.87
UBE2E3Q969T4 AC020593.1-201ENST00000507399 299 ntBASIC3.36□□□□□ -1.87
UBE2E3Q969T4 ARL2BPP6-201ENST00000512757 439 ntBASIC3.36□□□□□ -1.87
UBE2E3Q969T4 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.36□□□□□ -1.87
UBE2E3Q969T4 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.36□□□□□ -1.87
UBE2E3Q969T4 RNU6-334P-201ENST00000517072 102 ntBASIC3.36□□□□□ -1.87
UBE2E3Q969T4 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
UBE2E3Q969T4 IGLVIV-53-201ENST00000520107 367 ntBASIC3.36□□□□□ -1.87
UBE2E3Q969T4 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.36□□□□□ -1.87
UBE2E3Q969T4 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.36□□□□□ -1.87
UBE2E3Q969T4 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.36□□□□□ -1.87
UBE2E3Q969T4 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.36□□□□□ -1.87
UBE2E3Q969T4 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.36□□□□□ -1.87
UBE2E3Q969T4 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.36□□□□□ -1.87
UBE2E3Q969T4 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.36□□□□□ -1.87
UBE2E3Q969T4 BPTFP1-201ENST00000579209 492 ntBASIC3.36□□□□□ -1.87
UBE2E3Q969T4 AC022069.1-201ENST00000582910 658 ntBASIC3.36□□□□□ -1.87
UBE2E3Q969T4 AC010928.3-201ENST00000587712 541 ntBASIC3.36□□□□□ -1.87
UBE2E3Q969T4 OR4G1P-201ENST00000588632 938 ntBASIC3.36□□□□□ -1.87
UBE2E3Q969T4 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
UBE2E3Q969T4 HSPE1P14-201ENST00000605812 302 ntBASIC3.36□□□□□ -1.87
UBE2E3Q969T4 AP004247.3-201ENST00000608682 624 ntBASIC3.36□□□□□ -1.87
UBE2E3Q969T4 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.36□□□□□ -1.87
UBE2E3Q969T4 AL121772.2-201ENST00000614331 297 ntBASIC3.36□□□□□ -1.87
UBE2E3Q969T4 AC112200.1-201ENST00000625015 234 ntBASIC3.36□□□□□ -1.87
UBE2E3Q969T4 AL590396.4-201ENST00000636779 956 ntBASIC3.36□□□□□ -1.87
UBE2E3Q969T4 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.35□□□□□ -1.87
UBE2E3Q969T4 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.35□□□□□ -1.87
UBE2E3Q969T4 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
UBE2E3Q969T4 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
UBE2E3Q969T4 SAGE4P-201ENST00000442271 3381 ntBASIC3.35□□□□□ -1.87
UBE2E3Q969T4 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
UBE2E3Q969T4 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
UBE2E3Q969T4 RN7SKP111-201ENST00000410349 271 ntBASIC3.35□□□□□ -1.87
UBE2E3Q969T4 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.35□□□□□ -1.87
UBE2E3Q969T4 RPS3AP9-201ENST00000417027 792 ntBASIC3.35□□□□□ -1.87
UBE2E3Q969T4 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.35□□□□□ -1.87
UBE2E3Q969T4 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.35□□□□□ -1.87
UBE2E3Q969T4 AC017099.1-201ENST00000448261 1028 ntBASIC3.35□□□□□ -1.87
UBE2E3Q969T4 CDC42P1-201ENST00000456658 548 ntBASIC3.35□□□□□ -1.87
UBE2E3Q969T4 AC005726.1-201ENST00000494679 427 ntBASIC3.35□□□□□ -1.87
UBE2E3Q969T4 RNF138P1-201ENST00000502765 546 ntBASIC3.35□□□□□ -1.87
UBE2E3Q969T4 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.35□□□□□ -1.87
UBE2E3Q969T4 PCBP2P3-201ENST00000509726 843 ntBASIC3.35□□□□□ -1.87
UBE2E3Q969T4 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.35□□□□□ -1.87
UBE2E3Q969T4 MTCO1P30-201ENST00000515244 580 ntBASIC3.35□□□□□ -1.87
UBE2E3Q969T4 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.35□□□□□ -1.87
UBE2E3Q969T4 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.35□□□□□ -1.87
UBE2E3Q969T4 AC103843.2-201ENST00000530523 682 ntBASIC3.35□□□□□ -1.87
UBE2E3Q969T4 AL020997.2-201ENST00000602607 184 ntBASIC3.35□□□□□ -1.87
UBE2E3Q969T4 AC133794.1-201ENST00000602731 914 ntBASIC3.35□□□□□ -1.87
UBE2E3Q969T4 AL020997.3-201ENST00000602843 359 ntBASIC3.35□□□□□ -1.87
UBE2E3Q969T4 AC025946.2-201ENST00000603398 234 ntBASIC3.35□□□□□ -1.87
UBE2E3Q969T4 U73479.1-201ENST00000618062 168 ntBASIC3.35□□□□□ -1.87
UBE2E3Q969T4 SEPT7P7-201ENST00000420492 1301 ntBASIC3.35□□□□□ -1.87
UBE2E3Q969T4 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
UBE2E3Q969T4 ZNF285B-201ENST00000561698 1767 ntBASIC3.35□□□□□ -1.87
UBE2E3Q969T4 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms