Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AC092470.1-201ENST00000546187 132 ntBASIC4.46□□□□□ -1.7
HMGB4Q8WW32 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC4.46□□□□□ -1.7
HMGB4Q8WW32 AC093227.2-201ENST00000589357 285 ntBASIC4.46□□□□□ -1.7
HMGB4Q8WW32 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.46□□□□□ -1.7
HMGB4Q8WW32 BNIP3P11-201ENST00000603878 563 ntBASIC4.46□□□□□ -1.7
HMGB4Q8WW32 RBM12B-AS1-201ENST00000623283 653 ntBASIC4.46□□□□□ -1.7
HMGB4Q8WW32 MIR492-201ENST00000638676 116 ntBASIC4.46□□□□□ -1.7
HMGB4Q8WW32 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.46□□□□□ -1.7
HMGB4Q8WW32 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HMGB4Q8WW32 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HMGB4Q8WW32 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.46□□□□□ -1.7
HMGB4Q8WW32 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HMGB4Q8WW32 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
HMGB4Q8WW32 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HMGB4Q8WW32 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HMGB4Q8WW32 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HMGB4Q8WW32 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.45□□□□□ -1.7
HMGB4Q8WW32 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HMGB4Q8WW32 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HMGB4Q8WW32 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HMGB4Q8WW32 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HMGB4Q8WW32 AL049555.1-201ENST00000562834 1933 ntBASIC4.45□□□□□ -1.7
HMGB4Q8WW32 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HMGB4Q8WW32 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.45□□□□□ -1.7
HMGB4Q8WW32 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
HMGB4Q8WW32 RNU6-374P-201ENST00000364146 108 ntBASIC4.45□□□□□ -1.7
HMGB4Q8WW32 RNA5SP88-201ENST00000365560 109 ntBASIC4.45□□□□□ -1.7
HMGB4Q8WW32 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
HMGB4Q8WW32 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HMGB4Q8WW32 AL445189.1-201ENST00000405722 338 ntBASIC4.45□□□□□ -1.7
HMGB4Q8WW32 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HMGB4Q8WW32 AC093698.1-201ENST00000423843 571 ntBASIC4.45□□□□□ -1.7
HMGB4Q8WW32 ZYG11AP1-201ENST00000430329 837 ntBASIC4.45□□□□□ -1.7
HMGB4Q8WW32 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.45□□□□□ -1.7
HMGB4Q8WW32 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.45□□□□□ -1.7
HMGB4Q8WW32 EEF1E1P1-201ENST00000446998 430 ntBASIC4.45□□□□□ -1.7
HMGB4Q8WW32 BTF3P6-201ENST00000448054 499 ntBASIC4.45□□□□□ -1.7
HMGB4Q8WW32 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.45□□□□□ -1.7
HMGB4Q8WW32 AC092754.2-201ENST00000463506 460 ntBASIC4.45□□□□□ -1.7
HMGB4Q8WW32 RPL7P22-201ENST00000466005 733 ntBASIC4.45□□□□□ -1.7
HMGB4Q8WW32 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HMGB4Q8WW32 TMEM251P1-201ENST00000503717 318 ntBASIC4.45□□□□□ -1.7
HMGB4Q8WW32 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.45□□□□□ -1.7
HMGB4Q8WW32 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.45□□□□□ -1.7
HMGB4Q8WW32 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.45□□□□□ -1.7
HMGB4Q8WW32 RNA5SP497-201ENST00000516081 97 ntBASIC4.45□□□□□ -1.7
HMGB4Q8WW32 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.45□□□□□ -1.7
HMGB4Q8WW32 MED28P5-201ENST00000528254 438 ntBASIC4.45□□□□□ -1.7
HMGB4Q8WW32 PTP4A1P6-201ENST00000531034 478 ntBASIC4.45□□□□□ -1.7
HMGB4Q8WW32 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.45□□□□□ -1.7
HMGB4Q8WW32 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.45□□□□□ -1.7
HMGB4Q8WW32 AC012435.1-202ENST00000568772 240 ntBASIC4.45□□□□□ -1.7
HMGB4Q8WW32 AC090312.1-201ENST00000580637 348 ntBASIC4.45□□□□□ -1.7
HMGB4Q8WW32 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC4.45□□□□□ -1.7
HMGB4Q8WW32 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.45□□□□□ -1.7
HMGB4Q8WW32 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.45□□□□□ -1.7
HMGB4Q8WW32 AC004223.2-201ENST00000590309 544 ntBASIC4.45□□□□□ -1.7
HMGB4Q8WW32 AL590229.1-201ENST00000603497 542 ntBASIC4.45□□□□□ -1.7
HMGB4Q8WW32 RNU6-88P-201ENST00000606801 100 ntBASIC4.45□□□□□ -1.7
HMGB4Q8WW32 AC245008.1-201ENST00000608123 476 ntBASIC4.45□□□□□ -1.7
HMGB4Q8WW32 AC022106.2-201ENST00000620114 757 ntBASIC4.45□□□□□ -1.7
HMGB4Q8WW32 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
HMGB4Q8WW32 AL139811.1-201ENST00000424779 2299 ntBASIC4.45□□□□□ -1.7
HMGB4Q8WW32 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
HMGB4Q8WW32 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.45□□□□□ -1.7
HMGB4Q8WW32 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HMGB4Q8WW32 AP002907.1-201ENST00000606361 1430 ntBASIC4.45□□□□□ -1.7
HMGB4Q8WW32 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HMGB4Q8WW32 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
HMGB4Q8WW32 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
HMGB4Q8WW32 LINC01109-201ENST00000603837 3081 ntBASIC4.44□□□□□ -1.7
HMGB4Q8WW32 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
HMGB4Q8WW32 AC139769.1-204ENST00000472297 1931 ntBASIC4.44□□□□□ -1.7
HMGB4Q8WW32 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HMGB4Q8WW32 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.44□□□□□ -1.7
HMGB4Q8WW32 LARP1BP1-201ENST00000506036 1359 ntBASIC4.44□□□□□ -1.7
HMGB4Q8WW32 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HMGB4Q8WW32 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
HMGB4Q8WW32 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.44□□□□□ -1.7
HMGB4Q8WW32 RNU6-462P-201ENST00000362659 105 ntBASIC4.44□□□□□ -1.7
HMGB4Q8WW32 RNU6-433P-201ENST00000363216 104 ntBASIC4.44□□□□□ -1.7
HMGB4Q8WW32 MIR3065-201ENST00000390137 79 ntBASIC4.44□□□□□ -1.7
HMGB4Q8WW32 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HMGB4Q8WW32 HSFY4P-201ENST00000415994 1181 ntBASIC4.44□□□□□ -1.7
HMGB4Q8WW32 SEPT2P1-201ENST00000419651 180 ntBASIC4.44□□□□□ -1.7
HMGB4Q8WW32 AL139095.3-201ENST00000419672 1203 ntBASIC4.44□□□□□ -1.7
HMGB4Q8WW32 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC4.44□□□□□ -1.7
HMGB4Q8WW32 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC4.44□□□□□ -1.7
HMGB4Q8WW32 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.44□□□□□ -1.7
HMGB4Q8WW32 UBE2FP3-201ENST00000436366 524 ntBASIC4.44□□□□□ -1.7
HMGB4Q8WW32 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC4.44□□□□□ -1.7
HMGB4Q8WW32 HSFY6P-201ENST00000445573 403 ntBASIC4.44□□□□□ -1.7
HMGB4Q8WW32 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HMGB4Q8WW32 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.44□□□□□ -1.7
HMGB4Q8WW32 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.44□□□□□ -1.7
HMGB4Q8WW32 AL591473.1-201ENST00000464297 313 ntBASIC4.44□□□□□ -1.7
HMGB4Q8WW32 AC090013.1-201ENST00000485147 480 ntBASIC4.44□□□□□ -1.7
HMGB4Q8WW32 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.44□□□□□ -1.7
HMGB4Q8WW32 RPL21P129-201ENST00000491732 478 ntBASIC4.44□□□□□ -1.7
HMGB4Q8WW32 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms