Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 AC022832.1-201ENST00000530718 645 ntBASIC4.54□□□□□ -1.68
CPEB3Q8NE35 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.54□□□□□ -1.68
CPEB3Q8NE35 AL512310.1-201ENST00000548639 172 ntBASIC4.54□□□□□ -1.68
CPEB3Q8NE35 HAUS8P1-201ENST00000549005 542 ntBASIC4.54□□□□□ -1.68
CPEB3Q8NE35 HSPE1P3-201ENST00000559254 309 ntBASIC4.54□□□□□ -1.68
CPEB3Q8NE35 AL133457.1-201ENST00000564251 987 ntBASIC4.54□□□□□ -1.68
CPEB3Q8NE35 MTCYBP13-201ENST00000578634 1093 ntBASIC4.54□□□□□ -1.68
CPEB3Q8NE35 MIR1269B-201ENST00000580405 75 ntBASIC4.54□□□□□ -1.68
CPEB3Q8NE35 RPL12P25-202ENST00000598100 674 ntBASIC4.54□□□□□ -1.68
CPEB3Q8NE35 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.54□□□□□ -1.68
CPEB3Q8NE35 AL359999.1-201ENST00000604513 294 ntBASIC4.54□□□□□ -1.68
CPEB3Q8NE35 AC128687.2-201ENST00000609657 566 ntBASIC4.54□□□□□ -1.68
CPEB3Q8NE35 AC078899.5-201ENST00000612475 178 ntBASIC4.54□□□□□ -1.68
CPEB3Q8NE35 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CPEB3Q8NE35 AL445264.1-201ENST00000621719 171 ntBASIC4.54□□□□□ -1.68
CPEB3Q8NE35 AC009268.2-201ENST00000621925 457 ntBASIC4.54□□□□□ -1.68
CPEB3Q8NE35 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.54□□□□□ -1.68
CPEB3Q8NE35 AC006210.2-201ENST00000367074 1545 ntBASIC4.54□□□□□ -1.68
CPEB3Q8NE35 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
CPEB3Q8NE35 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CPEB3Q8NE35 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CPEB3Q8NE35 AL450345.1-202ENST00000605741 3881 ntBASIC4.54□□□□□ -1.68
CPEB3Q8NE35 AC025574.1-201ENST00000554784 1653 ntBASIC4.54□□□□□ -1.68
CPEB3Q8NE35 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.54□□□□□ -1.68
CPEB3Q8NE35 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.54□□□□□ -1.68
CPEB3Q8NE35 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.53□□□□□ -1.68
CPEB3Q8NE35 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
CPEB3Q8NE35 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CPEB3Q8NE35 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
CPEB3Q8NE35 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.53□□□□□ -1.68
CPEB3Q8NE35 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CPEB3Q8NE35 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.53□□□□□ -1.68
CPEB3Q8NE35 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.53□□□□□ -1.68
CPEB3Q8NE35 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.53□□□□□ -1.68
CPEB3Q8NE35 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.53□□□□□ -1.68
CPEB3Q8NE35 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CPEB3Q8NE35 RNU6-171P-201ENST00000384354 107 ntBASIC4.53□□□□□ -1.68
CPEB3Q8NE35 MIR600-201ENST00000385007 98 ntBASIC4.53□□□□□ -1.68
CPEB3Q8NE35 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CPEB3Q8NE35 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CPEB3Q8NE35 RPL12P9-201ENST00000412942 488 ntBASIC4.53□□□□□ -1.68
CPEB3Q8NE35 AC073136.2-201ENST00000417282 849 ntBASIC4.53□□□□□ -1.68
CPEB3Q8NE35 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.53□□□□□ -1.68
CPEB3Q8NE35 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.53□□□□□ -1.68
CPEB3Q8NE35 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CPEB3Q8NE35 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC4.53□□□□□ -1.68
CPEB3Q8NE35 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.53□□□□□ -1.68
CPEB3Q8NE35 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.53□□□□□ -1.68
CPEB3Q8NE35 AL136231.1-201ENST00000429407 730 ntBASIC4.53□□□□□ -1.68
CPEB3Q8NE35 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.53□□□□□ -1.68
CPEB3Q8NE35 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CPEB3Q8NE35 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.53□□□□□ -1.68
CPEB3Q8NE35 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC4.53□□□□□ -1.68
CPEB3Q8NE35 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.53□□□□□ -1.68
CPEB3Q8NE35 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.53□□□□□ -1.68
CPEB3Q8NE35 RPL31P50-201ENST00000471002 296 ntBASIC4.53□□□□□ -1.68
CPEB3Q8NE35 RN7SL177P-201ENST00000476596 299 ntBASIC4.53□□□□□ -1.68
CPEB3Q8NE35 RPL35P6-201ENST00000490024 372 ntBASIC4.53□□□□□ -1.68
CPEB3Q8NE35 AC072052.1-201ENST00000496556 306 ntBASIC4.53□□□□□ -1.68
CPEB3Q8NE35 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.53□□□□□ -1.68
CPEB3Q8NE35 AC006499.3-201ENST00000506077 748 ntBASIC4.53□□□□□ -1.68
CPEB3Q8NE35 OR5M14P-201ENST00000506803 618 ntBASIC4.53□□□□□ -1.68
CPEB3Q8NE35 HIGD1AP14-201ENST00000507617 282 ntBASIC4.53□□□□□ -1.68
CPEB3Q8NE35 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.53□□□□□ -1.68
CPEB3Q8NE35 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.53□□□□□ -1.68
CPEB3Q8NE35 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC4.53□□□□□ -1.68
CPEB3Q8NE35 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.53□□□□□ -1.68
CPEB3Q8NE35 AF235103.2-201ENST00000525753 346 ntBASIC4.53□□□□□ -1.68
CPEB3Q8NE35 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.53□□□□□ -1.68
CPEB3Q8NE35 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.53□□□□□ -1.68
CPEB3Q8NE35 AC107918.3-201ENST00000533272 382 ntBASIC4.53□□□□□ -1.68
CPEB3Q8NE35 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC4.53□□□□□ -1.68
CPEB3Q8NE35 AC107954.1-201ENST00000565906 727 ntBASIC4.53□□□□□ -1.68
CPEB3Q8NE35 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.53□□□□□ -1.68
CPEB3Q8NE35 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC4.53□□□□□ -1.68
CPEB3Q8NE35 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.53□□□□□ -1.68
CPEB3Q8NE35 AC073091.2-201ENST00000603205 907 ntBASIC4.53□□□□□ -1.68
CPEB3Q8NE35 AC245014.2-201ENST00000603689 287 ntBASIC4.53□□□□□ -1.68
CPEB3Q8NE35 AL035413.2-201ENST00000604801 525 ntBASIC4.53□□□□□ -1.68
CPEB3Q8NE35 AC246785.4-201ENST00000605374 287 ntBASIC4.53□□□□□ -1.68
CPEB3Q8NE35 AC118658.2-201ENST00000618697 459 ntBASIC4.53□□□□□ -1.68
CPEB3Q8NE35 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.53□□□□□ -1.68
CPEB3Q8NE35 AL732618.1-201ENST00000623251 301 ntBASIC4.53□□□□□ -1.68
CPEB3Q8NE35 AP002505.2-201ENST00000623585 696 ntBASIC4.53□□□□□ -1.68
CPEB3Q8NE35 AC135068.12-201ENST00000637370 931 ntBASIC4.53□□□□□ -1.68
CPEB3Q8NE35 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.53□□□□□ -1.68
CPEB3Q8NE35 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.53□□□□□ -1.68
CPEB3Q8NE35 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CPEB3Q8NE35 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.53□□□□□ -1.68
CPEB3Q8NE35 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CPEB3Q8NE35 MTND5P17-201ENST00000418405 1603 ntBASIC4.53□□□□□ -1.68
CPEB3Q8NE35 PABPC1P6-201ENST00000445594 1829 ntBASIC4.53□□□□□ -1.68
CPEB3Q8NE35 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CPEB3Q8NE35 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.53□□□□□ -1.68
CPEB3Q8NE35 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CPEB3Q8NE35 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CPEB3Q8NE35 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
CPEB3Q8NE35 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CPEB3Q8NE35 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.53□□□□□ -1.68
CPEB3Q8NE35 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms