Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 RNU6-171P-201ENST00000384354 107 ntBASIC4.38□□□□□ -1.71
PTCHD4Q6ZW05 RNU6-297P-201ENST00000384636 107 ntBASIC4.38□□□□□ -1.71
PTCHD4Q6ZW05 RNA5SP372-201ENST00000390836 115 ntBASIC4.38□□□□□ -1.71
PTCHD4Q6ZW05 RNU6-952P-201ENST00000391164 108 ntBASIC4.38□□□□□ -1.71
PTCHD4Q6ZW05 AC016769.3-201ENST00000396562 315 ntBASIC4.38□□□□□ -1.71
PTCHD4Q6ZW05 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.38□□□□□ -1.71
PTCHD4Q6ZW05 AL603766.1-201ENST00000407763 664 ntBASIC4.38□□□□□ -1.71
PTCHD4Q6ZW05 RNU6ATAC25P-201ENST00000408798 117 ntBASIC4.38□□□□□ -1.71
PTCHD4Q6ZW05 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC4.38□□□□□ -1.71
PTCHD4Q6ZW05 AF186996.5-201ENST00000418098 904 ntBASIC4.38□□□□□ -1.71
PTCHD4Q6ZW05 B3GALNT1P1-201ENST00000420569 975 ntBASIC4.38□□□□□ -1.71
PTCHD4Q6ZW05 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.38□□□□□ -1.71
PTCHD4Q6ZW05 AC091862.1-201ENST00000438016 1100 ntBASIC4.38□□□□□ -1.71
PTCHD4Q6ZW05 RPL12P11-201ENST00000439970 501 ntBASIC4.38□□□□□ -1.71
PTCHD4Q6ZW05 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.38□□□□□ -1.71
PTCHD4Q6ZW05 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
PTCHD4Q6ZW05 AL163193.1-201ENST00000444895 788 ntBASIC4.38□□□□□ -1.71
PTCHD4Q6ZW05 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.38□□□□□ -1.71
PTCHD4Q6ZW05 AC104651.2-201ENST00000447549 528 ntBASIC4.38□□□□□ -1.71
PTCHD4Q6ZW05 ARPC3P5-201ENST00000448802 534 ntBASIC4.38□□□□□ -1.71
PTCHD4Q6ZW05 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.38□□□□□ -1.71
PTCHD4Q6ZW05 RN7SL172P-201ENST00000460535 303 ntBASIC4.38□□□□□ -1.71
PTCHD4Q6ZW05 KLF3P2-201ENST00000465138 268 ntBASIC4.38□□□□□ -1.71
PTCHD4Q6ZW05 AC090142.1-201ENST00000465776 462 ntBASIC4.38□□□□□ -1.71
PTCHD4Q6ZW05 RPS26P39-201ENST00000469206 341 ntBASIC4.38□□□□□ -1.71
PTCHD4Q6ZW05 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PTCHD4Q6ZW05 AC022795.1-201ENST00000473808 480 ntBASIC4.38□□□□□ -1.71
PTCHD4Q6ZW05 RPS18P6-201ENST00000476880 458 ntBASIC4.38□□□□□ -1.71
PTCHD4Q6ZW05 RN7SL817P-201ENST00000480777 288 ntBASIC4.38□□□□□ -1.71
PTCHD4Q6ZW05 AC106872.3-201ENST00000495104 446 ntBASIC4.38□□□□□ -1.71
PTCHD4Q6ZW05 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.38□□□□□ -1.71
PTCHD4Q6ZW05 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC4.38□□□□□ -1.71
PTCHD4Q6ZW05 AC109927.2-201ENST00000506416 303 ntBASIC4.38□□□□□ -1.71
PTCHD4Q6ZW05 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PTCHD4Q6ZW05 AC106872.4-201ENST00000510050 523 ntBASIC4.38□□□□□ -1.71
PTCHD4Q6ZW05 PAICSP4-201ENST00000517543 1253 ntBASIC4.38□□□□□ -1.71
PTCHD4Q6ZW05 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.38□□□□□ -1.71
PTCHD4Q6ZW05 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.38□□□□□ -1.71
PTCHD4Q6ZW05 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.38□□□□□ -1.71
PTCHD4Q6ZW05 AC087883.1-201ENST00000551882 391 ntBASIC4.38□□□□□ -1.71
PTCHD4Q6ZW05 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PTCHD4Q6ZW05 TVP23CP2-201ENST00000571473 623 ntBASIC4.38□□□□□ -1.71
PTCHD4Q6ZW05 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.38□□□□□ -1.71
PTCHD4Q6ZW05 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC4.38□□□□□ -1.71
PTCHD4Q6ZW05 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.38□□□□□ -1.71
PTCHD4Q6ZW05 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.38□□□□□ -1.71
PTCHD4Q6ZW05 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.38□□□□□ -1.71
PTCHD4Q6ZW05 AC011447.4-201ENST00000587562 111 ntBASIC4.38□□□□□ -1.71
PTCHD4Q6ZW05 AC067852.4-201ENST00000590314 478 ntBASIC4.38□□□□□ -1.71
PTCHD4Q6ZW05 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.38□□□□□ -1.71
PTCHD4Q6ZW05 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.38□□□□□ -1.71
PTCHD4Q6ZW05 AC115621.1-201ENST00000604653 858 ntBASIC4.38□□□□□ -1.71
PTCHD4Q6ZW05 AC068944.2-201ENST00000610373 403 ntBASIC4.38□□□□□ -1.71
PTCHD4Q6ZW05 U6atac.1-201ENST00000616025 117 ntBASIC4.38□□□□□ -1.71
PTCHD4Q6ZW05 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.38□□□□□ -1.71
PTCHD4Q6ZW05 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.38□□□□□ -1.71
PTCHD4Q6ZW05 AL596275.2-204ENST00000641628 552 ntBASIC4.38□□□□□ -1.71
PTCHD4Q6ZW05 AL596275.2-206ENST00000641957 626 ntBASIC4.38□□□□□ -1.71
PTCHD4Q6ZW05 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.38□□□□□ -1.71
PTCHD4Q6ZW05 EOGT-210ENST00000615922 1931 ntBASIC4.38□□□□□ -1.71
PTCHD4Q6ZW05 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
PTCHD4Q6ZW05 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
PTCHD4Q6ZW05 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.38□□□□□ -1.71
PTCHD4Q6ZW05 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.38□□□□□ -1.71
PTCHD4Q6ZW05 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.38□□□□□ -1.71
PTCHD4Q6ZW05 AC015813.6-201ENST00000624409 5808 ntBASIC4.38□□□□□ -1.71
PTCHD4Q6ZW05 AL022578.1-201ENST00000439330 1433 ntBASIC4.38□□□□□ -1.71
PTCHD4Q6ZW05 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.37□□□□□ -1.71
PTCHD4Q6ZW05 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PTCHD4Q6ZW05 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PTCHD4Q6ZW05 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PTCHD4Q6ZW05 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.37□□□□□ -1.71
PTCHD4Q6ZW05 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PTCHD4Q6ZW05 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PTCHD4Q6ZW05 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
PTCHD4Q6ZW05 RNU1-20P-201ENST00000363314 162 ntBASIC4.37□□□□□ -1.71
PTCHD4Q6ZW05 U3.15-201ENST00000365398 212 ntBASIC4.37□□□□□ -1.71
PTCHD4Q6ZW05 RNU6-259P-201ENST00000383999 107 ntBASIC4.37□□□□□ -1.71
PTCHD4Q6ZW05 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
PTCHD4Q6ZW05 HDGFP1-201ENST00000405943 252 ntBASIC4.37□□□□□ -1.71
PTCHD4Q6ZW05 RN7SKP206-201ENST00000410823 293 ntBASIC4.37□□□□□ -1.71
PTCHD4Q6ZW05 VDAC1P9-201ENST00000412766 841 ntBASIC4.37□□□□□ -1.71
PTCHD4Q6ZW05 USP9YP13-201ENST00000417797 480 ntBASIC4.37□□□□□ -1.71
PTCHD4Q6ZW05 AIMP1P1-201ENST00000418670 937 ntBASIC4.37□□□□□ -1.71
PTCHD4Q6ZW05 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.37□□□□□ -1.71
PTCHD4Q6ZW05 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.37□□□□□ -1.71
PTCHD4Q6ZW05 OR2AM1P-201ENST00000422137 422 ntBASIC4.37□□□□□ -1.71
PTCHD4Q6ZW05 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PTCHD4Q6ZW05 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC4.37□□□□□ -1.71
PTCHD4Q6ZW05 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.37□□□□□ -1.71
PTCHD4Q6ZW05 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.37□□□□□ -1.71
PTCHD4Q6ZW05 CNOT7P2-201ENST00000441051 832 ntBASIC4.37□□□□□ -1.71
PTCHD4Q6ZW05 MTND5P14-201ENST00000441481 1267 ntBASIC4.37□□□□□ -1.71
PTCHD4Q6ZW05 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.37□□□□□ -1.71
PTCHD4Q6ZW05 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.37□□□□□ -1.71
PTCHD4Q6ZW05 NANOGNBP1-201ENST00000448444 480 ntBASIC4.37□□□□□ -1.71
PTCHD4Q6ZW05 PAXBP1P1-201ENST00000449315 447 ntBASIC4.37□□□□□ -1.71
PTCHD4Q6ZW05 USP9YP12-201ENST00000450481 570 ntBASIC4.37□□□□□ -1.71
PTCHD4Q6ZW05 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC4.37□□□□□ -1.71
PTCHD4Q6ZW05 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms