Protein–RNA interactions for Protein: Q12860

CNTN1, Contactin-1, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN1Q12860 AC093698.1-201ENST00000423843 571 ntBASIC3.79□□□□□ -1.8
CNTN1Q12860 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.79□□□□□ -1.8
CNTN1Q12860 AL513175.1-201ENST00000431492 780 ntBASIC3.79□□□□□ -1.8
CNTN1Q12860 AC010881.1-201ENST00000433830 235 ntBASIC3.79□□□□□ -1.8
CNTN1Q12860 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CNTN1Q12860 SNORA71B-202ENST00000439232 272 ntBASIC3.79□□□□□ -1.8
CNTN1Q12860 SETD6P1-201ENST00000444575 317 ntBASIC3.79□□□□□ -1.8
CNTN1Q12860 RPL7P59-201ENST00000447700 943 ntBASIC3.79□□□□□ -1.8
CNTN1Q12860 MRPL42P4-201ENST00000453267 443 ntBASIC3.79□□□□□ -1.8
CNTN1Q12860 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.79□□□□□ -1.8
CNTN1Q12860 AC079203.1-201ENST00000487972 404 ntBASIC3.79□□□□□ -1.8
CNTN1Q12860 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CNTN1Q12860 AC108941.1-201ENST00000502853 530 ntBASIC3.79□□□□□ -1.8
CNTN1Q12860 AC113420.1-201ENST00000507903 571 ntBASIC3.79□□□□□ -1.8
CNTN1Q12860 AC005351.1-201ENST00000511152 786 ntBASIC3.79□□□□□ -1.8
CNTN1Q12860 RAC1P2-201ENST00000511164 579 ntBASIC3.79□□□□□ -1.8
CNTN1Q12860 AC026726.1-201ENST00000512859 601 ntBASIC3.79□□□□□ -1.8
CNTN1Q12860 RNU6-488P-201ENST00000515918 99 ntBASIC3.79□□□□□ -1.8
CNTN1Q12860 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.79□□□□□ -1.8
CNTN1Q12860 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.79□□□□□ -1.8
CNTN1Q12860 SOD1P3-201ENST00000518682 454 ntBASIC3.79□□□□□ -1.8
CNTN1Q12860 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.79□□□□□ -1.8
CNTN1Q12860 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.79□□□□□ -1.8
CNTN1Q12860 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.79□□□□□ -1.8
CNTN1Q12860 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC3.79□□□□□ -1.8
CNTN1Q12860 AC067852.4-201ENST00000590314 478 ntBASIC3.79□□□□□ -1.8
CNTN1Q12860 CCDC58P3-201ENST00000590792 430 ntBASIC3.79□□□□□ -1.8
CNTN1Q12860 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.79□□□□□ -1.8
CNTN1Q12860 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CNTN1Q12860 AC024220.1-201ENST00000603675 484 ntBASIC3.79□□□□□ -1.8
CNTN1Q12860 AL365400.2-201ENST00000605604 902 ntBASIC3.79□□□□□ -1.8
CNTN1Q12860 SNORA62.6-201ENST00000606322 83 ntBASIC3.79□□□□□ -1.8
CNTN1Q12860 AC123767.1-202ENST00000620407 817 ntBASIC3.79□□□□□ -1.8
CNTN1Q12860 AC079684.1-201ENST00000621405 437 ntBASIC3.79□□□□□ -1.8
CNTN1Q12860 AC009093.8-201ENST00000641769 292 ntBASIC3.79□□□□□ -1.8
CNTN1Q12860 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CNTN1Q12860 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CNTN1Q12860 AC106871.1-201ENST00000568324 3102 ntBASIC3.79□□□□□ -1.8
CNTN1Q12860 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CNTN1Q12860 AC018555.1-201ENST00000567548 1980 ntBASIC3.78□□□□□ -1.8
CNTN1Q12860 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.78□□□□□ -1.8
CNTN1Q12860 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.78□□□□□ -1.8
CNTN1Q12860 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.78□□□□□ -1.8
CNTN1Q12860 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
CNTN1Q12860 RPL7P60-201ENST00000397636 735 ntBASIC3.78□□□□□ -1.8
CNTN1Q12860 DSTNP4-201ENST00000399472 474 ntBASIC3.78□□□□□ -1.8
CNTN1Q12860 MTCO2P8-201ENST00000412213 658 ntBASIC3.78□□□□□ -1.8
CNTN1Q12860 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.78□□□□□ -1.8
CNTN1Q12860 AC011742.1-201ENST00000431448 434 ntBASIC3.78□□□□□ -1.8
CNTN1Q12860 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.78□□□□□ -1.8
CNTN1Q12860 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.78□□□□□ -1.8
CNTN1Q12860 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.78□□□□□ -1.8
CNTN1Q12860 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.78□□□□□ -1.8
CNTN1Q12860 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.78□□□□□ -1.8
CNTN1Q12860 AC022034.3-201ENST00000471393 478 ntBASIC3.78□□□□□ -1.8
CNTN1Q12860 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.78□□□□□ -1.8
CNTN1Q12860 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.78□□□□□ -1.8
CNTN1Q12860 HMGB1P21-201ENST00000502313 581 ntBASIC3.78□□□□□ -1.8
CNTN1Q12860 GTF2IP9-201ENST00000502460 301 ntBASIC3.78□□□□□ -1.8
CNTN1Q12860 AC011352.3-201ENST00000505162 593 ntBASIC3.78□□□□□ -1.8
CNTN1Q12860 AC109471.1-201ENST00000511631 612 ntBASIC3.78□□□□□ -1.8
CNTN1Q12860 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.78□□□□□ -1.8
CNTN1Q12860 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.78□□□□□ -1.8
CNTN1Q12860 RN7SKP82-201ENST00000516786 223 ntBASIC3.78□□□□□ -1.8
CNTN1Q12860 IGHV3-32-201ENST00000519182 355 ntBASIC3.78□□□□□ -1.8
CNTN1Q12860 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.78□□□□□ -1.8
CNTN1Q12860 AC092747.2-201ENST00000545069 983 ntBASIC3.78□□□□□ -1.8
CNTN1Q12860 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.78□□□□□ -1.8
CNTN1Q12860 AL161713.1-201ENST00000555538 145 ntBASIC3.78□□□□□ -1.8
CNTN1Q12860 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.78□□□□□ -1.8
CNTN1Q12860 RN7SL339P-201ENST00000580597 296 ntBASIC3.78□□□□□ -1.8
CNTN1Q12860 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.78□□□□□ -1.8
CNTN1Q12860 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.78□□□□□ -1.8
CNTN1Q12860 BNIP3P22-201ENST00000593399 556 ntBASIC3.78□□□□□ -1.8
CNTN1Q12860 RNU1-30P-201ENST00000606575 163 ntBASIC3.78□□□□□ -1.8
CNTN1Q12860 AC105227.2-201ENST00000615075 605 ntBASIC3.78□□□□□ -1.8
CNTN1Q12860 AL359715.5-201ENST00000623431 443 ntBASIC3.78□□□□□ -1.8
CNTN1Q12860 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.78□□□□□ -1.8
CNTN1Q12860 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.78□□□□□ -1.8
CNTN1Q12860 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.78□□□□□ -1.8
CNTN1Q12860 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CNTN1Q12860 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CNTN1Q12860 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.78□□□□□ -1.8
CNTN1Q12860 AC095050.2-201ENST00000510748 1458 ntBASIC3.78□□□□□ -1.8
CNTN1Q12860 UBE3AP2-201ENST00000429033 2259 ntBASIC3.78□□□□□ -1.8
CNTN1Q12860 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
CNTN1Q12860 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.77□□□□□ -1.81
CNTN1Q12860 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CNTN1Q12860 AP001486.2-201ENST00000561652 5113 ntBASIC3.77□□□□□ -1.81
CNTN1Q12860 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CNTN1Q12860 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.77□□□□□ -1.81
CNTN1Q12860 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CNTN1Q12860 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CNTN1Q12860 AL139811.1-201ENST00000424779 2299 ntBASIC3.77□□□□□ -1.81
CNTN1Q12860 AC008725.1-201ENST00000605123 2263 ntBASIC3.77□□□□□ -1.81
CNTN1Q12860 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
CNTN1Q12860 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
CNTN1Q12860 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CNTN1Q12860 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.77□□□□□ -1.81
CNTN1Q12860 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms