Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
UBE3AQ05086 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.54□□□□□ -1.68
UBE3AQ05086 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
UBE3AQ05086 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.54□□□□□ -1.68
UBE3AQ05086 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.53□□□□□ -1.68
UBE3AQ05086 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
UBE3AQ05086 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.53□□□□□ -1.68
UBE3AQ05086 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
UBE3AQ05086 AC106871.1-201ENST00000568324 3102 ntBASIC4.53□□□□□ -1.68
UBE3AQ05086 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
UBE3AQ05086 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.53□□□□□ -1.68
UBE3AQ05086 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.53□□□□□ -1.68
UBE3AQ05086 SNRPEP3-201ENST00000338402 276 ntBASIC4.53□□□□□ -1.68
UBE3AQ05086 RNU6-356P-201ENST00000384140 107 ntBASIC4.53□□□□□ -1.68
UBE3AQ05086 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
UBE3AQ05086 SNRPEP2-201ENST00000397592 279 ntBASIC4.53□□□□□ -1.68
UBE3AQ05086 AL592291.1-201ENST00000403830 352 ntBASIC4.53□□□□□ -1.68
UBE3AQ05086 MIR1250-201ENST00000408098 113 ntBASIC4.53□□□□□ -1.68
UBE3AQ05086 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC4.53□□□□□ -1.68
UBE3AQ05086 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.53□□□□□ -1.68
UBE3AQ05086 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC4.53□□□□□ -1.68
UBE3AQ05086 MTND1P32-201ENST00000433043 938 ntBASIC4.53□□□□□ -1.68
UBE3AQ05086 RPL23AP46-201ENST00000438548 490 ntBASIC4.53□□□□□ -1.68
UBE3AQ05086 AC092427.1-201ENST00000439177 601 ntBASIC4.53□□□□□ -1.68
UBE3AQ05086 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.53□□□□□ -1.68
UBE3AQ05086 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
UBE3AQ05086 RPL7P38-201ENST00000488396 739 ntBASIC4.53□□□□□ -1.68
UBE3AQ05086 AC104090.1-201ENST00000506341 1171 ntBASIC4.53□□□□□ -1.68
UBE3AQ05086 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.53□□□□□ -1.68
UBE3AQ05086 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC4.53□□□□□ -1.68
UBE3AQ05086 AC005798.1-201ENST00000513715 387 ntBASIC4.53□□□□□ -1.68
UBE3AQ05086 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.53□□□□□ -1.68
UBE3AQ05086 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC4.53□□□□□ -1.68
UBE3AQ05086 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC4.53□□□□□ -1.68
UBE3AQ05086 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.53□□□□□ -1.68
UBE3AQ05086 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.53□□□□□ -1.68
UBE3AQ05086 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC4.53□□□□□ -1.68
UBE3AQ05086 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.53□□□□□ -1.68
UBE3AQ05086 AC005412.1-201ENST00000580812 1049 ntBASIC4.53□□□□□ -1.68
UBE3AQ05086 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.53□□□□□ -1.68
UBE3AQ05086 VN1R82P-201ENST00000601481 356 ntBASIC4.53□□□□□ -1.68
UBE3AQ05086 AC025588.3-201ENST00000604182 274 ntBASIC4.53□□□□□ -1.68
UBE3AQ05086 AC010680.3-201ENST00000604215 520 ntBASIC4.53□□□□□ -1.68
UBE3AQ05086 AC069304.2-201ENST00000605154 435 ntBASIC4.53□□□□□ -1.68
UBE3AQ05086 AL159169.3-201ENST00000608871 561 ntBASIC4.53□□□□□ -1.68
UBE3AQ05086 AC078899.5-201ENST00000612475 178 ntBASIC4.53□□□□□ -1.68
UBE3AQ05086 AC092650.2-201ENST00000619984 902 ntBASIC4.53□□□□□ -1.68
UBE3AQ05086 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
UBE3AQ05086 NMD3P1-201ENST00000439704 1488 ntBASIC4.53□□□□□ -1.68
UBE3AQ05086 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.53□□□□□ -1.68
UBE3AQ05086 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.53□□□□□ -1.68
UBE3AQ05086 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
UBE3AQ05086 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.53□□□□□ -1.68
UBE3AQ05086 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
UBE3AQ05086 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
UBE3AQ05086 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
UBE3AQ05086 PABPC1P7-201ENST00000413177 1513 ntBASIC4.52□□□□□ -1.69
UBE3AQ05086 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.52□□□□□ -1.69
UBE3AQ05086 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
UBE3AQ05086 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.52□□□□□ -1.69
UBE3AQ05086 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
UBE3AQ05086 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
UBE3AQ05086 SNORD113-6-201ENST00000363345 75 ntBASIC4.52□□□□□ -1.69
UBE3AQ05086 MIR200C-201ENST00000384980 68 ntBASIC4.52□□□□□ -1.69
UBE3AQ05086 MTND4P13-201ENST00000402078 1023 ntBASIC4.52□□□□□ -1.69
UBE3AQ05086 AL121834.1-202ENST00000404494 277 ntBASIC4.52□□□□□ -1.69
UBE3AQ05086 RNU6-757P-201ENST00000410334 100 ntBASIC4.52□□□□□ -1.69
UBE3AQ05086 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC4.52□□□□□ -1.69
UBE3AQ05086 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.52□□□□□ -1.69
UBE3AQ05086 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC4.52□□□□□ -1.69
UBE3AQ05086 RPS29P7-201ENST00000439662 171 ntBASIC4.52□□□□□ -1.69
UBE3AQ05086 RPS26P2-201ENST00000440331 348 ntBASIC4.52□□□□□ -1.69
UBE3AQ05086 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
UBE3AQ05086 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
UBE3AQ05086 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.52□□□□□ -1.69
UBE3AQ05086 AC108751.2-201ENST00000469993 231 ntBASIC4.52□□□□□ -1.69
UBE3AQ05086 RPL23AP2-201ENST00000471227 466 ntBASIC4.52□□□□□ -1.69
UBE3AQ05086 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.52□□□□□ -1.69
UBE3AQ05086 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.52□□□□□ -1.69
UBE3AQ05086 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.52□□□□□ -1.69
UBE3AQ05086 AP001636.2-201ENST00000525517 696 ntBASIC4.52□□□□□ -1.69
UBE3AQ05086 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC4.52□□□□□ -1.69
UBE3AQ05086 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.52□□□□□ -1.69
UBE3AQ05086 AL512347.1-201ENST00000566420 503 ntBASIC4.52□□□□□ -1.69
UBE3AQ05086 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.52□□□□□ -1.69
UBE3AQ05086 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.52□□□□□ -1.69
UBE3AQ05086 DPRXP5-201ENST00000604662 539 ntBASIC4.52□□□□□ -1.69
UBE3AQ05086 AP002360.3-201ENST00000607673 710 ntBASIC4.52□□□□□ -1.69
UBE3AQ05086 AC007546.1-201ENST00000619452 559 ntBASIC4.52□□□□□ -1.69
UBE3AQ05086 AC007546.2-201ENST00000623996 360 ntBASIC4.52□□□□□ -1.69
UBE3AQ05086 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
UBE3AQ05086 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
UBE3AQ05086 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.52□□□□□ -1.69
UBE3AQ05086 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
UBE3AQ05086 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
UBE3AQ05086 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.51□□□□□ -1.69
UBE3AQ05086 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
UBE3AQ05086 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
UBE3AQ05086 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.51□□□□□ -1.69
UBE3AQ05086 AL390862.1-201ENST00000635467 1469 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms