Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 AP000346.3-201ENST00000622821 210 ntBASIC3.98□□□□□ -1.77
SEC61A1P61619 AL359740.1-201ENST00000624340 592 ntBASIC3.98□□□□□ -1.77
SEC61A1P61619 LDHA-225ENST00000625635 141 ntTSL 5 BASIC3.98□□□□□ -1.77
SEC61A1P61619 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC3.98□□□□□ -1.77
SEC61A1P61619 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.98□□□□□ -1.77
SEC61A1P61619 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SEC61A1P61619 CR383658.2-201ENST00000547576 1525 ntBASIC3.98□□□□□ -1.77
SEC61A1P61619 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SEC61A1P61619 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SEC61A1P61619 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SEC61A1P61619 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SEC61A1P61619 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SEC61A1P61619 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SEC61A1P61619 AL442639.1-201ENST00000625030 1899 ntBASIC3.98□□□□□ -1.77
SEC61A1P61619 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
SEC61A1P61619 CDR1-202ENST00000625883 1485 ntBASIC3.98□□□□□ -1.77
SEC61A1P61619 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC3.98□□□□□ -1.77
SEC61A1P61619 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SEC61A1P61619 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
SEC61A1P61619 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC3.97□□□□□ -1.77
SEC61A1P61619 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
SEC61A1P61619 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
SEC61A1P61619 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
SEC61A1P61619 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SEC61A1P61619 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SEC61A1P61619 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC3.97□□□□□ -1.77
SEC61A1P61619 AC079741.1-201ENST00000321498 212 ntBASIC3.97□□□□□ -1.77
SEC61A1P61619 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
SEC61A1P61619 RNA5SP443-201ENST00000363083 132 ntBASIC3.97□□□□□ -1.77
SEC61A1P61619 SUGT1P1-201ENST00000379514 476 ntBASIC3.97□□□□□ -1.77
SEC61A1P61619 Y_RNA.516-201ENST00000384541 124 ntBASIC3.97□□□□□ -1.77
SEC61A1P61619 TMSB4XP8-201ENST00000402089 135 ntBASIC3.97□□□□□ -1.77
SEC61A1P61619 ARL4AP5-201ENST00000404372 599 ntBASIC3.97□□□□□ -1.77
SEC61A1P61619 RPS16P5-201ENST00000406501 404 ntBASIC3.97□□□□□ -1.77
SEC61A1P61619 RNA5SP39-201ENST00000411245 120 ntBASIC3.97□□□□□ -1.77
SEC61A1P61619 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SEC61A1P61619 TMSB4XP6-201ENST00000415187 135 ntBASIC3.97□□□□□ -1.77
SEC61A1P61619 AC092634.6-201ENST00000418558 192 ntBASIC3.97□□□□□ -1.77
SEC61A1P61619 LINC00993-201ENST00000420453 540 ntBASIC3.97□□□□□ -1.77
SEC61A1P61619 RPL7P57-201ENST00000423238 740 ntBASIC3.97□□□□□ -1.77
SEC61A1P61619 TMSB4XP1-201ENST00000424567 135 ntBASIC3.97□□□□□ -1.77
SEC61A1P61619 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC3.97□□□□□ -1.77
SEC61A1P61619 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.97□□□□□ -1.77
SEC61A1P61619 B3GNT2P1-201ENST00000434960 952 ntBASIC3.97□□□□□ -1.77
SEC61A1P61619 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.97□□□□□ -1.77
SEC61A1P61619 H2AFZP6-201ENST00000444403 394 ntBASIC3.97□□□□□ -1.77
SEC61A1P61619 RPS27AP15-201ENST00000447672 466 ntBASIC3.97□□□□□ -1.77
SEC61A1P61619 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.97□□□□□ -1.77
SEC61A1P61619 AL513533.1-201ENST00000453728 415 ntBASIC3.97□□□□□ -1.77
SEC61A1P61619 MTCO3P11-201ENST00000455103 774 ntBASIC3.97□□□□□ -1.77
SEC61A1P61619 RPL21P71-201ENST00000465598 459 ntBASIC3.97□□□□□ -1.77
SEC61A1P61619 AC006463.2-201ENST00000473326 348 ntBASIC3.97□□□□□ -1.77
SEC61A1P61619 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.97□□□□□ -1.77
SEC61A1P61619 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.97□□□□□ -1.77
SEC61A1P61619 AC025164.1-201ENST00000496249 478 ntBASIC3.97□□□□□ -1.77
SEC61A1P61619 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.97□□□□□ -1.77
SEC61A1P61619 MTCO1P30-201ENST00000515244 580 ntBASIC3.97□□□□□ -1.77
SEC61A1P61619 RNU6-1261P-201ENST00000517194 104 ntBASIC3.97□□□□□ -1.77
SEC61A1P61619 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.97□□□□□ -1.77
SEC61A1P61619 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.97□□□□□ -1.77
SEC61A1P61619 SERPINE4P-201ENST00000554978 281 ntBASIC3.97□□□□□ -1.77
SEC61A1P61619 AC245505.1-201ENST00000556398 224 ntBASIC3.97□□□□□ -1.77
SEC61A1P61619 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC3.97□□□□□ -1.77
SEC61A1P61619 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.97□□□□□ -1.77
SEC61A1P61619 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC3.97□□□□□ -1.77
SEC61A1P61619 VN1R92P-201ENST00000598511 928 ntBASIC3.97□□□□□ -1.77
SEC61A1P61619 AC008745.1-201ENST00000604064 271 ntBASIC3.97□□□□□ -1.77
SEC61A1P61619 AC068276.1-201ENST00000605793 379 ntBASIC3.97□□□□□ -1.77
SEC61A1P61619 Z99129.1-201ENST00000612510 255 ntBASIC3.97□□□□□ -1.77
SEC61A1P61619 AC116165.2-201ENST00000616705 206 ntBASIC3.97□□□□□ -1.77
SEC61A1P61619 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC3.97□□□□□ -1.77
SEC61A1P61619 AC243756.2-201ENST00000618406 463 ntBASIC3.97□□□□□ -1.77
SEC61A1P61619 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
SEC61A1P61619 AC079228.1-201ENST00000624774 1049 ntBASIC3.97□□□□□ -1.77
SEC61A1P61619 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC3.97□□□□□ -1.77
SEC61A1P61619 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SEC61A1P61619 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
SEC61A1P61619 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.97□□□□□ -1.77
SEC61A1P61619 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SEC61A1P61619 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
SEC61A1P61619 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC3.97□□□□□ -1.77
SEC61A1P61619 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC3.97□□□□□ -1.77
SEC61A1P61619 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC3.97□□□□□ -1.77
SEC61A1P61619 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SEC61A1P61619 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SEC61A1P61619 AC016588.2-201ENST00000632484 3021 ntBASIC3.97□□□□□ -1.77
SEC61A1P61619 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
SEC61A1P61619 OR5BR1P-201ENST00000524992 1330 ntBASIC3.96□□□□□ -1.77
SEC61A1P61619 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
SEC61A1P61619 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC3.96□□□□□ -1.77
SEC61A1P61619 AC006971.1-201ENST00000407916 4486 ntBASIC3.96□□□□□ -1.77
SEC61A1P61619 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC3.96□□□□□ -1.78
SEC61A1P61619 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
SEC61A1P61619 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.96□□□□□ -1.78
SEC61A1P61619 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
SEC61A1P61619 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC3.96□□□□□ -1.78
SEC61A1P61619 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.96□□□□□ -1.78
SEC61A1P61619 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.96□□□□□ -1.78
SEC61A1P61619 SNORA75-201ENST00000384158 137 ntBASIC3.96□□□□□ -1.78
SEC61A1P61619 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms