Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC5.02□□□□□ -1.61
RHBDL3P58872 RPL21P112-201ENST00000434403 463 ntBASIC5.02□□□□□ -1.61
RHBDL3P58872 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
RHBDL3P58872 TPTE2P3-201ENST00000441562 1189 ntBASIC5.02□□□□□ -1.61
RHBDL3P58872 ELOCP13-201ENST00000443934 329 ntBASIC5.02□□□□□ -1.61
RHBDL3P58872 AC239367.2-201ENST00000447309 705 ntBASIC5.02□□□□□ -1.61
RHBDL3P58872 RPL12P26-201ENST00000452430 487 ntBASIC5.02□□□□□ -1.61
RHBDL3P58872 snoU109.4-201ENST00000458953 143 ntBASIC5.02□□□□□ -1.61
RHBDL3P58872 AF213884.1-201ENST00000488102 463 ntBASIC5.02□□□□□ -1.61
RHBDL3P58872 AC108022.1-201ENST00000493466 478 ntBASIC5.02□□□□□ -1.61
RHBDL3P58872 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC5.02□□□□□ -1.61
RHBDL3P58872 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.02□□□□□ -1.61
RHBDL3P58872 AC087465.1-201ENST00000560574 245 ntBASIC5.02□□□□□ -1.61
RHBDL3P58872 AL512347.1-201ENST00000566420 503 ntBASIC5.02□□□□□ -1.61
RHBDL3P58872 AC034105.4-201ENST00000568304 277 ntBASIC5.02□□□□□ -1.61
RHBDL3P58872 MIR5186-201ENST00000577504 120 ntBASIC5.02□□□□□ -1.61
RHBDL3P58872 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC5.02□□□□□ -1.61
RHBDL3P58872 VN1R79P-201ENST00000593540 513 ntBASIC5.02□□□□□ -1.61
RHBDL3P58872 AC245036.5-201ENST00000596330 847 ntBASIC5.02□□□□□ -1.61
RHBDL3P58872 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC5.02□□□□□ -1.61
RHBDL3P58872 AC140113.4-201ENST00000622087 222 ntBASIC5.02□□□□□ -1.61
RHBDL3P58872 AC116618.1-201ENST00000634617 774 ntBASIC5.02□□□□□ -1.61
RHBDL3P58872 AL157700.1-201ENST00000561973 1432 ntBASIC5.02□□□□□ -1.61
RHBDL3P58872 AC017104.4-201ENST00000636283 1592 ntBASIC5.02□□□□□ -1.61
RHBDL3P58872 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.02□□□□□ -1.61
RHBDL3P58872 AC106871.1-201ENST00000568324 3102 ntBASIC5.02□□□□□ -1.61
RHBDL3P58872 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5.02□□□□□ -1.61
RHBDL3P58872 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RHBDL3P58872 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
RHBDL3P58872 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
RHBDL3P58872 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.02□□□□□ -1.61
RHBDL3P58872 OR5BR1P-201ENST00000524992 1330 ntBASIC5.01□□□□□ -1.61
RHBDL3P58872 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.01□□□□□ -1.61
RHBDL3P58872 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC5.01□□□□□ -1.61
RHBDL3P58872 AL031595.2-201ENST00000624215 19071 ntBASIC5.01□□□□□ -1.61
RHBDL3P58872 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RHBDL3P58872 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
RHBDL3P58872 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
RHBDL3P58872 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RHBDL3P58872 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
RHBDL3P58872 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RHBDL3P58872 SNORA7.2-201ENST00000364446 145 ntBASIC5.01□□□□□ -1.61
RHBDL3P58872 RNU4-28P-201ENST00000364739 141 ntBASIC5.01□□□□□ -1.61
RHBDL3P58872 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.01□□□□□ -1.61
RHBDL3P58872 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RHBDL3P58872 CUBN-201ENST00000377823 705 ntTSL 3 BASIC5.01□□□□□ -1.61
RHBDL3P58872 MIR3074-201ENST00000384885 81 ntBASIC5.01□□□□□ -1.61
RHBDL3P58872 HMGB1P17-201ENST00000403495 628 ntBASIC5.01□□□□□ -1.61
RHBDL3P58872 RNU4-78P-201ENST00000410940 126 ntBASIC5.01□□□□□ -1.61
RHBDL3P58872 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC5.01□□□□□ -1.61
RHBDL3P58872 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC5.01□□□□□ -1.61
RHBDL3P58872 AL513174.1-201ENST00000423182 629 ntBASIC5.01□□□□□ -1.61
RHBDL3P58872 AL162151.2-201ENST00000448875 158 ntBASIC5.01□□□□□ -1.61
RHBDL3P58872 MTND2P19-201ENST00000449129 1012 ntBASIC5.01□□□□□ -1.61
RHBDL3P58872 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC5.01□□□□□ -1.61
RHBDL3P58872 USP9YP25-201ENST00000457708 443 ntBASIC5.01□□□□□ -1.61
RHBDL3P58872 RN7SL604P-201ENST00000492589 296 ntBASIC5.01□□□□□ -1.61
RHBDL3P58872 ARL4AP1-201ENST00000503220 705 ntBASIC5.01□□□□□ -1.61
RHBDL3P58872 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC5.01□□□□□ -1.61
RHBDL3P58872 AC020593.1-201ENST00000507399 299 ntBASIC5.01□□□□□ -1.61
RHBDL3P58872 AC034244.1-201ENST00000507687 207 ntBASIC5.01□□□□□ -1.61
RHBDL3P58872 AC010587.2-201ENST00000511727 448 ntBASIC5.01□□□□□ -1.61
RHBDL3P58872 FTH1P21-201ENST00000512179 511 ntBASIC5.01□□□□□ -1.61
RHBDL3P58872 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC5.01□□□□□ -1.61
RHBDL3P58872 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC5.01□□□□□ -1.61
RHBDL3P58872 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC5.01□□□□□ -1.61
RHBDL3P58872 AP004242.1-201ENST00000533701 349 ntBASIC5.01□□□□□ -1.61
RHBDL3P58872 SMILR-201ENST00000533992 553 ntTSL 4 BASIC5.01□□□□□ -1.61
RHBDL3P58872 AC135001.1-201ENST00000544546 283 ntBASIC5.01□□□□□ -1.61
RHBDL3P58872 AL133457.1-201ENST00000564251 987 ntBASIC5.01□□□□□ -1.61
RHBDL3P58872 AC022655.2-201ENST00000577280 318 ntBASIC5.01□□□□□ -1.61
RHBDL3P58872 RN7SL703P-201ENST00000578485 302 ntBASIC5.01□□□□□ -1.61
RHBDL3P58872 AC006130.2-201ENST00000586202 326 ntBASIC5.01□□□□□ -1.61
RHBDL3P58872 AC061975.8-201ENST00000587058 721 ntBASIC5.01□□□□□ -1.61
RHBDL3P58872 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC5.01□□□□□ -1.61
RHBDL3P58872 SNRPGP15-201ENST00000600149 222 ntBASIC5.01□□□□□ -1.61
RHBDL3P58872 VN1R82P-201ENST00000601481 356 ntBASIC5.01□□□□□ -1.61
RHBDL3P58872 AC234772.3-201ENST00000602277 528 ntBASIC5.01□□□□□ -1.61
RHBDL3P58872 AC103881.1-201ENST00000603476 538 ntBASIC5.01□□□□□ -1.61
RHBDL3P58872 RNU4-89P-201ENST00000607443 133 ntBASIC5.01□□□□□ -1.61
RHBDL3P58872 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC5.01□□□□□ -1.61
RHBDL3P58872 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC5.01□□□□□ -1.61
RHBDL3P58872 STK31-205ENST00000433467 3085 ntTSL 2 BASIC5.01□□□□□ -1.61
RHBDL3P58872 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RHBDL3P58872 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.01□□□□□ -1.61
RHBDL3P58872 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
RHBDL3P58872 AC027287.1-201ENST00000553115 1453 ntBASIC5□□□□□ -1.61
RHBDL3P58872 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RHBDL3P58872 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC5□□□□□ -1.61
RHBDL3P58872 MFF-206ENST00000392059 1710 ntTSL 5 BASIC5□□□□□ -1.61
RHBDL3P58872 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC5□□□□□ -1.61
RHBDL3P58872 AL356473.1-201ENST00000406203 1408 ntBASIC5□□□□□ -1.61
RHBDL3P58872 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC5□□□□□ -1.61
RHBDL3P58872 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
RHBDL3P58872 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC5□□□□□ -1.61
RHBDL3P58872 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RHBDL3P58872 FAM133CP-201ENST00000332869 704 ntBASIC5□□□□□ -1.61
RHBDL3P58872 RNU6-263P-201ENST00000363811 107 ntBASIC5□□□□□ -1.61
RHBDL3P58872 AL121834.1-202ENST00000404494 277 ntBASIC5□□□□□ -1.61
RHBDL3P58872 AL445189.1-201ENST00000405722 338 ntBASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms