Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 AC093578.1-201ENST00000415219 368 ntBASIC3.23□□□□□ -1.89
CLDN18P56856 TOMM22P1-201ENST00000418578 312 ntBASIC3.23□□□□□ -1.89
CLDN18P56856 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.23□□□□□ -1.89
CLDN18P56856 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CLDN18P56856 YME1L1P1-201ENST00000429435 297 ntBASIC3.23□□□□□ -1.89
CLDN18P56856 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CLDN18P56856 MTCYBP31-201ENST00000438855 1122 ntBASIC3.23□□□□□ -1.89
CLDN18P56856 ELOCP13-201ENST00000443934 329 ntBASIC3.23□□□□□ -1.89
CLDN18P56856 RPS26P56-201ENST00000444468 240 ntBASIC3.23□□□□□ -1.89
CLDN18P56856 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.23□□□□□ -1.89
CLDN18P56856 RPL21P23-201ENST00000446654 460 ntBASIC3.23□□□□□ -1.89
CLDN18P56856 ZNF736P6Y-201ENST00000447526 1213 ntBASIC3.23□□□□□ -1.89
CLDN18P56856 DNAJC19P8-201ENST00000452887 259 ntBASIC3.23□□□□□ -1.89
CLDN18P56856 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC3.23□□□□□ -1.89
CLDN18P56856 AC010307.1-201ENST00000467206 836 ntBASIC3.23□□□□□ -1.89
CLDN18P56856 RPL23AP14-201ENST00000468281 468 ntBASIC3.23□□□□□ -1.89
CLDN18P56856 RNF138P1-201ENST00000502765 546 ntBASIC3.23□□□□□ -1.89
CLDN18P56856 AC110768.1-201ENST00000509222 400 ntBASIC3.23□□□□□ -1.89
CLDN18P56856 AC021146.1-201ENST00000511202 716 ntBASIC3.23□□□□□ -1.89
CLDN18P56856 SNORA48.9-201ENST00000516419 162 ntBASIC3.23□□□□□ -1.89
CLDN18P56856 SNORA70.18-201ENST00000516696 98 ntBASIC3.23□□□□□ -1.89
CLDN18P56856 RN7SKP116-201ENST00000516902 319 ntBASIC3.23□□□□□ -1.89
CLDN18P56856 IGKV2D-36-201ENST00000518643 226 ntBASIC3.23□□□□□ -1.89
CLDN18P56856 AP001207.1-201ENST00000524051 481 ntBASIC3.23□□□□□ -1.89
CLDN18P56856 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.23□□□□□ -1.89
CLDN18P56856 AC109635.4-202ENST00000531666 412 ntBASIC3.23□□□□□ -1.89
CLDN18P56856 OR5B10P-201ENST00000532869 642 ntBASIC3.23□□□□□ -1.89
CLDN18P56856 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.23□□□□□ -1.89
CLDN18P56856 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.23□□□□□ -1.89
CLDN18P56856 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.23□□□□□ -1.89
CLDN18P56856 AC135178.6-201ENST00000605314 398 ntBASIC3.23□□□□□ -1.89
CLDN18P56856 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.23□□□□□ -1.89
CLDN18P56856 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.23□□□□□ -1.89
CLDN18P56856 AC243312.2-201ENST00000623340 601 ntBASIC3.23□□□□□ -1.89
CLDN18P56856 AP003400.6-201ENST00000624698 740 ntBASIC3.23□□□□□ -1.89
CLDN18P56856 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.23□□□□□ -1.89
CLDN18P56856 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.23□□□□□ -1.89
CLDN18P56856 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CLDN18P56856 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
CLDN18P56856 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CLDN18P56856 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CLDN18P56856 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.23□□□□□ -1.89
CLDN18P56856 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
CLDN18P56856 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CLDN18P56856 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.22□□□□□ -1.89
CLDN18P56856 AC091152.2-201ENST00000591628 2569 ntBASIC3.22□□□□□ -1.89
CLDN18P56856 AF117829.1-206ENST00000621883 3802 ntBASIC3.22□□□□□ -1.89
CLDN18P56856 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CLDN18P56856 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CLDN18P56856 NCAPGP1-201ENST00000505112 1814 ntBASIC3.22□□□□□ -1.89
CLDN18P56856 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.22□□□□□ -1.89
CLDN18P56856 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.22□□□□□ -1.89
CLDN18P56856 MIR218-2-201ENST00000385006 110 ntBASIC3.22□□□□□ -1.89
CLDN18P56856 MIR591-201ENST00000385290 95 ntBASIC3.22□□□□□ -1.89
CLDN18P56856 HMGN2P8-201ENST00000391458 268 ntBASIC3.22□□□□□ -1.89
CLDN18P56856 RPL23AP47-201ENST00000408017 460 ntBASIC3.22□□□□□ -1.89
CLDN18P56856 SNORA11C-201ENST00000408532 129 ntBASIC3.22□□□□□ -1.89
CLDN18P56856 RNA5SP129-201ENST00000410276 118 ntBASIC3.22□□□□□ -1.89
CLDN18P56856 RNU4-78P-201ENST00000410940 126 ntBASIC3.22□□□□□ -1.89
CLDN18P56856 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.22□□□□□ -1.89
CLDN18P56856 HMGB3P31-201ENST00000413333 595 ntBASIC3.22□□□□□ -1.89
CLDN18P56856 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.22□□□□□ -1.89
CLDN18P56856 RPL21P109-201ENST00000422213 475 ntBASIC3.22□□□□□ -1.89
CLDN18P56856 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.22□□□□□ -1.89
CLDN18P56856 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.22□□□□□ -1.89
CLDN18P56856 PNRC2P1-201ENST00000423940 420 ntBASIC3.22□□□□□ -1.89
CLDN18P56856 SDCBPP2-201ENST00000424643 885 ntBASIC3.22□□□□□ -1.89
CLDN18P56856 AL451062.2-201ENST00000427515 271 ntBASIC3.22□□□□□ -1.89
CLDN18P56856 AC073063.1-201ENST00000434352 607 ntBASIC3.22□□□□□ -1.89
CLDN18P56856 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.22□□□□□ -1.89
CLDN18P56856 AC092641.1-201ENST00000440229 772 ntBASIC3.22□□□□□ -1.89
CLDN18P56856 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.22□□□□□ -1.89
CLDN18P56856 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.22□□□□□ -1.89
CLDN18P56856 HMGN2P16-201ENST00000456802 261 ntBASIC3.22□□□□□ -1.89
CLDN18P56856 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.22□□□□□ -1.89
CLDN18P56856 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.22□□□□□ -1.89
CLDN18P56856 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.22□□□□□ -1.89
CLDN18P56856 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.22□□□□□ -1.89
CLDN18P56856 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.22□□□□□ -1.89
CLDN18P56856 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC3.22□□□□□ -1.89
CLDN18P56856 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.22□□□□□ -1.89
CLDN18P56856 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.22□□□□□ -1.89
CLDN18P56856 AL133457.1-201ENST00000564251 987 ntBASIC3.22□□□□□ -1.89
CLDN18P56856 AC006116.10-201ENST00000591836 581 ntBASIC3.22□□□□□ -1.89
CLDN18P56856 KLKP1-201ENST00000595979 403 ntBASIC3.22□□□□□ -1.89
CLDN18P56856 AC006077.1-201ENST00000604746 343 ntBASIC3.22□□□□□ -1.89
CLDN18P56856 AC004775.1-201ENST00000607389 753 ntBASIC3.22□□□□□ -1.89
CLDN18P56856 AC015802.5-201ENST00000607478 399 ntBASIC3.22□□□□□ -1.89
CLDN18P56856 AC092354.2-201ENST00000607786 514 ntBASIC3.22□□□□□ -1.89
CLDN18P56856 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.22□□□□□ -1.89
CLDN18P56856 AC112503.2-201ENST00000609005 552 ntBASIC3.22□□□□□ -1.89
CLDN18P56856 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.22□□□□□ -1.89
CLDN18P56856 PLCE1P1-201ENST00000622094 305 ntBASIC3.22□□□□□ -1.89
CLDN18P56856 AL356490.1-201ENST00000623079 479 ntBASIC3.22□□□□□ -1.89
CLDN18P56856 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.22□□□□□ -1.89
CLDN18P56856 AC244258.1-201ENST00000637553 1071 ntBASIC3.22□□□□□ -1.89
CLDN18P56856 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CLDN18P56856 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CLDN18P56856 AL365440.1-201ENST00000436135 2167 ntBASIC3.22□□□□□ -1.89
CLDN18P56856 AL021368.2-201ENST00000606125 5352 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms