Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5□□□□□ -1.61
GFRA1P56159 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC5□□□□□ -1.61
GFRA1P56159 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5□□□□□ -1.61
GFRA1P56159 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5□□□□□ -1.61
GFRA1P56159 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5□□□□□ -1.61
GFRA1P56159 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5□□□□□ -1.61
GFRA1P56159 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC5□□□□□ -1.61
GFRA1P56159 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5□□□□□ -1.61
GFRA1P56159 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC5□□□□□ -1.61
GFRA1P56159 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC5□□□□□ -1.61
GFRA1P56159 AC099494.2-201ENST00000623371 978 ntBASIC5□□□□□ -1.61
GFRA1P56159 CGA-206ENST00000630630 832 ntTSL 2 BASIC5□□□□□ -1.61
GFRA1P56159 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5□□□□□ -1.61
GFRA1P56159 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5□□□□□ -1.61
GFRA1P56159 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
GFRA1P56159 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5□□□□□ -1.61
GFRA1P56159 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
GFRA1P56159 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5□□□□□ -1.61
GFRA1P56159 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5□□□□□ -1.61
GFRA1P56159 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
GFRA1P56159 OR4F13P-202ENST00000560066 2054 ntBASIC5□□□□□ -1.61
GFRA1P56159 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5□□□□□ -1.61
GFRA1P56159 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
GFRA1P56159 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
GFRA1P56159 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC4.99□□□□□ -1.61
GFRA1P56159 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.99□□□□□ -1.61
GFRA1P56159 DHX40P1-201ENST00000588725 1412 ntBASIC4.99□□□□□ -1.61
GFRA1P56159 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC4.99□□□□□ -1.61
GFRA1P56159 RIOK3P1-201ENST00000418778 1528 ntBASIC4.99□□□□□ -1.61
GFRA1P56159 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
GFRA1P56159 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC4.99□□□□□ -1.61
GFRA1P56159 NXPH1-205ENST00000602349 1953 ntBASIC4.99□□□□□ -1.61
GFRA1P56159 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
GFRA1P56159 RPL7P26-201ENST00000333817 754 ntBASIC4.99□□□□□ -1.61
GFRA1P56159 RNU6-1078P-201ENST00000364522 103 ntBASIC4.99□□□□□ -1.61
GFRA1P56159 CDC123-202ENST00000378900 933 ntTSL 5 BASIC4.99□□□□□ -1.61
GFRA1P56159 RNU6-116P-201ENST00000384042 109 ntBASIC4.99□□□□□ -1.61
GFRA1P56159 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
GFRA1P56159 AL136116.1-201ENST00000403591 381 ntBASIC4.99□□□□□ -1.61
GFRA1P56159 MIR1250-201ENST00000408098 113 ntBASIC4.99□□□□□ -1.61
GFRA1P56159 EEF1A1P40-201ENST00000412883 573 ntBASIC4.99□□□□□ -1.61
GFRA1P56159 AC007390.1-201ENST00000415722 356 ntBASIC4.99□□□□□ -1.61
GFRA1P56159 AC009161.1-201ENST00000417306 376 ntBASIC4.99□□□□□ -1.61
GFRA1P56159 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC4.99□□□□□ -1.61
GFRA1P56159 AL590399.2-201ENST00000427536 309 ntBASIC4.99□□□□□ -1.61
GFRA1P56159 AC008850.1-201ENST00000427546 362 ntBASIC4.99□□□□□ -1.61
GFRA1P56159 AL138799.3-201ENST00000438968 350 ntBASIC4.99□□□□□ -1.61
GFRA1P56159 snoU13.29-201ENST00000459370 104 ntBASIC4.99□□□□□ -1.61
GFRA1P56159 SNORD125-201ENST00000459538 96 ntBASIC4.99□□□□□ -1.61
GFRA1P56159 AL133445.1-201ENST00000467051 452 ntBASIC4.99□□□□□ -1.61
GFRA1P56159 ST13P14-201ENST00000474095 734 ntBASIC4.99□□□□□ -1.61
GFRA1P56159 AL163973.1-201ENST00000484753 577 ntBASIC4.99□□□□□ -1.61
GFRA1P56159 UBA52P7-201ENST00000486088 380 ntBASIC4.99□□□□□ -1.61
GFRA1P56159 AC093278.1-201ENST00000494700 600 ntBASIC4.99□□□□□ -1.61
GFRA1P56159 RPL38P4-201ENST00000502376 214 ntBASIC4.99□□□□□ -1.61
GFRA1P56159 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC4.99□□□□□ -1.61
GFRA1P56159 BX510359.5-201ENST00000515651 304 ntBASIC4.99□□□□□ -1.61
GFRA1P56159 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC4.99□□□□□ -1.61
GFRA1P56159 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.99□□□□□ -1.61
GFRA1P56159 PTP4A1P6-201ENST00000531034 478 ntBASIC4.99□□□□□ -1.61
GFRA1P56159 AP000857.1-201ENST00000532151 543 ntBASIC4.99□□□□□ -1.61
GFRA1P56159 OR5BN1P-201ENST00000532955 829 ntBASIC4.99□□□□□ -1.61
GFRA1P56159 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC4.99□□□□□ -1.61
GFRA1P56159 AC090022.1-201ENST00000546569 311 ntBASIC4.99□□□□□ -1.61
GFRA1P56159 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC4.99□□□□□ -1.61
GFRA1P56159 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.99□□□□□ -1.61
GFRA1P56159 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC4.99□□□□□ -1.61
GFRA1P56159 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.99□□□□□ -1.61
GFRA1P56159 RPS3AP23-202ENST00000574601 686 ntBASIC4.99□□□□□ -1.61
GFRA1P56159 MIR4489-201ENST00000578869 62 ntBASIC4.99□□□□□ -1.61
GFRA1P56159 AC010525.2-201ENST00000590920 195 ntBASIC4.99□□□□□ -1.61
GFRA1P56159 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
GFRA1P56159 AC044792.1-201ENST00000593294 196 ntBASIC4.99□□□□□ -1.61
GFRA1P56159 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC4.99□□□□□ -1.61
GFRA1P56159 AC006329.2-201ENST00000611491 394 ntBASIC4.99□□□□□ -1.61
GFRA1P56159 AL512624.1-201ENST00000613638 469 ntBASIC4.99□□□□□ -1.61
GFRA1P56159 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.99□□□□□ -1.61
GFRA1P56159 AP001784.1-201ENST00000624107 428 ntBASIC4.99□□□□□ -1.61
GFRA1P56159 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.99□□□□□ -1.61
GFRA1P56159 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC4.99□□□□□ -1.61
GFRA1P56159 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
GFRA1P56159 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
GFRA1P56159 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
GFRA1P56159 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
GFRA1P56159 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.99□□□□□ -1.61
GFRA1P56159 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.99□□□□□ -1.61
GFRA1P56159 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC4.99□□□□□ -1.61
GFRA1P56159 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.99□□□□□ -1.61
GFRA1P56159 AC025470.1-201ENST00000510053 2032 ntBASIC4.99□□□□□ -1.61
GFRA1P56159 AC068870.1-201ENST00000563737 2455 ntBASIC4.99□□□□□ -1.61
GFRA1P56159 AP001284.1-201ENST00000528393 2118 ntBASIC4.99□□□□□ -1.61
GFRA1P56159 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
GFRA1P56159 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
GFRA1P56159 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
GFRA1P56159 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
GFRA1P56159 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
GFRA1P56159 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
GFRA1P56159 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
GFRA1P56159 AL359955.1-201ENST00000455242 3275 ntBASIC4.98□□□□□ -1.61
GFRA1P56159 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 147.1 ms