Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 PRELID3BP6-201ENST00000503839 571 ntBASIC3.98□□□□□ -1.77
VCPP55072 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.98□□□□□ -1.77
VCPP55072 RNU2-58P-201ENST00000516403 183 ntBASIC3.98□□□□□ -1.77
VCPP55072 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.98□□□□□ -1.77
VCPP55072 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.98□□□□□ -1.77
VCPP55072 SUMO2P20-201ENST00000520803 283 ntBASIC3.98□□□□□ -1.77
VCPP55072 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.98□□□□□ -1.77
VCPP55072 COX6B1P6-201ENST00000522347 255 ntBASIC3.98□□□□□ -1.77
VCPP55072 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC3.98□□□□□ -1.77
VCPP55072 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC3.98□□□□□ -1.77
VCPP55072 AC106734.1-201ENST00000568646 663 ntBASIC3.98□□□□□ -1.77
VCPP55072 AL137849.1-201ENST00000604767 169 ntBASIC3.98□□□□□ -1.77
VCPP55072 AC011816.2-201ENST00000607089 556 ntBASIC3.98□□□□□ -1.77
VCPP55072 AC107294.1-201ENST00000609524 467 ntBASIC3.98□□□□□ -1.77
VCPP55072 RN7SL853P-201ENST00000617250 223 ntBASIC3.98□□□□□ -1.77
VCPP55072 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.98□□□□□ -1.77
VCPP55072 HSPA8P19-201ENST00000505359 1517 ntBASIC3.98□□□□□ -1.77
VCPP55072 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
VCPP55072 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
VCPP55072 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
VCPP55072 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
VCPP55072 RPS4XP5-202ENST00000449995 1334 ntBASIC3.97□□□□□ -1.77
VCPP55072 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
VCPP55072 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.97□□□□□ -1.77
VCPP55072 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
VCPP55072 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
VCPP55072 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.97□□□□□ -1.77
VCPP55072 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.97□□□□□ -1.77
VCPP55072 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
VCPP55072 DNAJC19P6-201ENST00000401853 280 ntBASIC3.97□□□□□ -1.77
VCPP55072 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.97□□□□□ -1.77
VCPP55072 MTCO2P1-201ENST00000424648 477 ntBASIC3.97□□□□□ -1.77
VCPP55072 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC3.97□□□□□ -1.77
VCPP55072 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.97□□□□□ -1.77
VCPP55072 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.97□□□□□ -1.77
VCPP55072 AC008155.2-201ENST00000464337 397 ntBASIC3.97□□□□□ -1.77
VCPP55072 CYCSP20-201ENST00000473154 315 ntBASIC3.97□□□□□ -1.77
VCPP55072 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.97□□□□□ -1.77
VCPP55072 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.97□□□□□ -1.77
VCPP55072 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.97□□□□□ -1.77
VCPP55072 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.97□□□□□ -1.77
VCPP55072 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
VCPP55072 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.97□□□□□ -1.77
VCPP55072 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.97□□□□□ -1.77
VCPP55072 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
VCPP55072 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.97□□□□□ -1.77
VCPP55072 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
VCPP55072 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.97□□□□□ -1.77
VCPP55072 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.97□□□□□ -1.77
VCPP55072 AC120053.1-201ENST00000607706 736 ntBASIC3.97□□□□□ -1.77
VCPP55072 AC112503.1-201ENST00000608436 391 ntBASIC3.97□□□□□ -1.77
VCPP55072 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
VCPP55072 RMST_10.1-201ENST00000616309 154 ntBASIC3.97□□□□□ -1.77
VCPP55072 AC006249.1-201ENST00000621223 471 ntBASIC3.97□□□□□ -1.77
VCPP55072 AP002371.2-201ENST00000624450 503 ntBASIC3.97□□□□□ -1.77
VCPP55072 AC080188.3-201ENST00000624842 748 ntBASIC3.97□□□□□ -1.77
VCPP55072 AC244258.1-201ENST00000637553 1071 ntBASIC3.97□□□□□ -1.77
VCPP55072 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
VCPP55072 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
VCPP55072 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.97□□□□□ -1.77
VCPP55072 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.97□□□□□ -1.77
VCPP55072 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
VCPP55072 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
VCPP55072 SEPT7P7-201ENST00000420492 1301 ntBASIC3.96□□□□□ -1.77
VCPP55072 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.77
VCPP55072 MFSD8-213ENST00000641134 1327 ntBASIC3.96□□□□□ -1.77
VCPP55072 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.77
VCPP55072 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
VCPP55072 AL049781.1-201ENST00000623195 3585 ntBASIC3.96□□□□□ -1.78
VCPP55072 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
VCPP55072 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.96□□□□□ -1.78
VCPP55072 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
VCPP55072 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
VCPP55072 MIR1303-201ENST00000408625 86 ntBASIC3.96□□□□□ -1.78
VCPP55072 RNU2-37P-201ENST00000410695 177 ntBASIC3.96□□□□□ -1.78
VCPP55072 RNA5SP120-201ENST00000410900 112 ntBASIC3.96□□□□□ -1.78
VCPP55072 RPS15AP40-201ENST00000419621 391 ntBASIC3.96□□□□□ -1.78
VCPP55072 AL512649.1-201ENST00000428997 581 ntBASIC3.96□□□□□ -1.78
VCPP55072 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.96□□□□□ -1.78
VCPP55072 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
VCPP55072 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC3.96□□□□□ -1.78
VCPP55072 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.96□□□□□ -1.78
VCPP55072 RPL23AP62-201ENST00000463396 453 ntBASIC3.96□□□□□ -1.78
VCPP55072 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.96□□□□□ -1.78
VCPP55072 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.96□□□□□ -1.78
VCPP55072 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.96□□□□□ -1.78
VCPP55072 AC112518.2-201ENST00000508565 425 ntBASIC3.96□□□□□ -1.78
VCPP55072 AC121161.1-201ENST00000510606 652 ntBASIC3.96□□□□□ -1.78
VCPP55072 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.96□□□□□ -1.78
VCPP55072 RNA5SP208-201ENST00000516156 78 ntBASIC3.96□□□□□ -1.78
VCPP55072 RN7SKP277-201ENST00000516895 283 ntBASIC3.96□□□□□ -1.78
VCPP55072 RNU6-334P-201ENST00000517072 102 ntBASIC3.96□□□□□ -1.78
VCPP55072 RNU4-60P-201ENST00000517239 135 ntBASIC3.96□□□□□ -1.78
VCPP55072 CENPUP2-201ENST00000555897 1186 ntBASIC3.96□□□□□ -1.78
VCPP55072 MIR3908-201ENST00000579798 126 ntBASIC3.96□□□□□ -1.78
VCPP55072 AC012254.4-201ENST00000588843 273 ntBASIC3.96□□□□□ -1.78
VCPP55072 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.96□□□□□ -1.78
VCPP55072 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.96□□□□□ -1.78
VCPP55072 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
VCPP55072 MIR8057-201ENST00000620957 69 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms