Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 NPM1P13-201ENST00000452663 865 ntBASIC3.47□□□□□ -1.85
NUP98P52948 AC133473.1-201ENST00000455173 299 ntBASIC3.47□□□□□ -1.85
NUP98P52948 AC078817.1-201ENST00000492623 435 ntBASIC3.47□□□□□ -1.85
NUP98P52948 FAM60DP-201ENST00000524174 632 ntBASIC3.47□□□□□ -1.85
NUP98P52948 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.47□□□□□ -1.85
NUP98P52948 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.47□□□□□ -1.85
NUP98P52948 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
NUP98P52948 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
NUP98P52948 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.46□□□□□ -1.85
NUP98P52948 RNA5SP289-201ENST00000362332 137 ntBASIC3.46□□□□□ -1.86
NUP98P52948 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
NUP98P52948 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
NUP98P52948 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
NUP98P52948 RNA5SP107-201ENST00000411358 122 ntBASIC3.46□□□□□ -1.86
NUP98P52948 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.46□□□□□ -1.86
NUP98P52948 AC010468.1-201ENST00000461022 817 ntBASIC3.46□□□□□ -1.86
NUP98P52948 ALDH7A1P3-201ENST00000492517 345 ntBASIC3.46□□□□□ -1.86
NUP98P52948 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.46□□□□□ -1.86
NUP98P52948 AL096803.3-201ENST00000609032 532 ntBASIC3.46□□□□□ -1.86
NUP98P52948 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
NUP98P52948 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
NUP98P52948 RNA5SP68-201ENST00000363885 119 ntBASIC3.45□□□□□ -1.86
NUP98P52948 RNU6-805P-201ENST00000365643 106 ntBASIC3.45□□□□□ -1.86
NUP98P52948 RPL31P1-201ENST00000398116 372 ntBASIC3.45□□□□□ -1.86
NUP98P52948 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.45□□□□□ -1.86
NUP98P52948 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.45□□□□□ -1.86
NUP98P52948 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.45□□□□□ -1.86
NUP98P52948 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.45□□□□□ -1.86
NUP98P52948 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.45□□□□□ -1.86
NUP98P52948 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.45□□□□□ -1.86
NUP98P52948 PRELID3BP7-201ENST00000503606 469 ntBASIC3.45□□□□□ -1.86
NUP98P52948 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.45□□□□□ -1.86
NUP98P52948 AC243972.3-201ENST00000539655 198 ntBASIC3.45□□□□□ -1.86
NUP98P52948 AC122134.1-201ENST00000565664 1104 ntBASIC3.45□□□□□ -1.86
NUP98P52948 AL049844.2-201ENST00000604280 628 ntBASIC3.45□□□□□ -1.86
NUP98P52948 LINC00901.1-201ENST00000617252 152 ntBASIC3.45□□□□□ -1.86
NUP98P52948 AP002967.1-201ENST00000624203 539 ntBASIC3.45□□□□□ -1.86
NUP98P52948 AC010149.2-201ENST00000637608 315 ntBASIC3.45□□□□□ -1.86
NUP98P52948 DDX18P3-201ENST00000404856 2007 ntBASIC3.45□□□□□ -1.86
NUP98P52948 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
NUP98P52948 MAPK10-373ENST00000641983 6772 ntBASIC3.44□□□□□ -1.86
NUP98P52948 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.44□□□□□ -1.86
NUP98P52948 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.44□□□□□ -1.86
NUP98P52948 RNA5SP282-201ENST00000516355 108 ntBASIC3.44□□□□□ -1.86
NUP98P52948 RN7SKP60-201ENST00000516985 239 ntBASIC3.44□□□□□ -1.86
NUP98P52948 AP002812.4-201ENST00000532139 286 ntBASIC3.44□□□□□ -1.86
NUP98P52948 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.44□□□□□ -1.86
NUP98P52948 AC008121.2-201ENST00000614647 523 ntBASIC3.44□□□□□ -1.86
NUP98P52948 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.44□□□□□ -1.86
NUP98P52948 AC107021.2-201ENST00000567714 2095 ntBASIC3.44□□□□□ -1.86
NUP98P52948 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.44□□□□□ -1.86
NUP98P52948 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
NUP98P52948 MIR148B-201ENST00000362252 99 ntBASIC3.44□□□□□ -1.86
NUP98P52948 MIR196B-201ENST00000384852 84 ntBASIC3.44□□□□□ -1.86
NUP98P52948 AL603766.1-201ENST00000407763 664 ntBASIC3.44□□□□□ -1.86
NUP98P52948 AC009963.1-201ENST00000417265 157 ntBASIC3.44□□□□□ -1.86
NUP98P52948 RPS12P5-201ENST00000423449 371 ntBASIC3.44□□□□□ -1.86
NUP98P52948 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.44□□□□□ -1.86
NUP98P52948 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.44□□□□□ -1.86
NUP98P52948 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.44□□□□□ -1.86
NUP98P52948 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.44□□□□□ -1.86
NUP98P52948 AC245166.1-201ENST00000521012 253 ntBASIC3.44□□□□□ -1.86
NUP98P52948 SERPINE4P-201ENST00000554978 281 ntBASIC3.44□□□□□ -1.86
NUP98P52948 MIR3945-201ENST00000581853 98 ntBASIC3.44□□□□□ -1.86
NUP98P52948 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC3.44□□□□□ -1.86
NUP98P52948 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
NUP98P52948 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
NUP98P52948 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
NUP98P52948 AC093831.2-201ENST00000624393 3427 ntBASIC3.43□□□□□ -1.86
NUP98P52948 RNU6-1263P-201ENST00000384601 106 ntBASIC3.43□□□□□ -1.86
NUP98P52948 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.43□□□□□ -1.86
NUP98P52948 CACYBPP2-201ENST00000453625 678 ntBASIC3.43□□□□□ -1.86
NUP98P52948 AC098583.1-201ENST00000480875 255 ntBASIC3.43□□□□□ -1.86
NUP98P52948 RN7SKP5-201ENST00000517045 272 ntBASIC3.43□□□□□ -1.86
NUP98P52948 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
NUP98P52948 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.43□□□□□ -1.86
NUP98P52948 CR382285.2-201ENST00000624662 1495 ntBASIC3.43□□□□□ -1.86
NUP98P52948 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.43□□□□□ -1.86
NUP98P52948 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
NUP98P52948 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.43□□□□□ -1.86
NUP98P52948 AC092593.1-201ENST00000515413 1815 ntBASIC3.43□□□□□ -1.86
NUP98P52948 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
NUP98P52948 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.42□□□□□ -1.86
NUP98P52948 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NUP98P52948 YPEL5P1-201ENST00000419731 367 ntBASIC3.42□□□□□ -1.86
NUP98P52948 PPIAP17-201ENST00000438507 471 ntBASIC3.42□□□□□ -1.86
NUP98P52948 FGF7P3-201ENST00000454645 303 ntBASIC3.42□□□□□ -1.86
NUP98P52948 RPL21P41-201ENST00000459863 264 ntBASIC3.42□□□□□ -1.86
NUP98P52948 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC3.42□□□□□ -1.86
NUP98P52948 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.42□□□□□ -1.86
NUP98P52948 OR5AK3P-201ENST00000527486 1297 ntBASIC3.42□□□□□ -1.86
NUP98P52948 AC079089.3-201ENST00000603094 673 ntBASIC3.42□□□□□ -1.86
NUP98P52948 MTND4P10-201ENST00000446199 1363 ntBASIC3.42□□□□□ -1.86
NUP98P52948 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
NUP98P52948 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
NUP98P52948 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.42□□□□□ -1.86
NUP98P52948 MIR26A1-201ENST00000362205 77 ntBASIC3.42□□□□□ -1.86
NUP98P52948 HMGB3P23-201ENST00000414981 585 ntBASIC3.42□□□□□ -1.86
NUP98P52948 MRPL50P2-201ENST00000416821 482 ntBASIC3.42□□□□□ -1.86
NUP98P52948 MTND4LP12-201ENST00000448237 295 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms