Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 AP001189.2-201ENST00000527320 189 ntBASIC4.14□□□□□ -1.75
CLCNKAP51800 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC4.14□□□□□ -1.75
CLCNKAP51800 AC105233.3-201ENST00000531125 744 ntBASIC4.14□□□□□ -1.75
CLCNKAP51800 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC4.14□□□□□ -1.75
CLCNKAP51800 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.14□□□□□ -1.75
CLCNKAP51800 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC4.14□□□□□ -1.75
CLCNKAP51800 AC138915.2-201ENST00000569776 97 ntBASIC4.14□□□□□ -1.75
CLCNKAP51800 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC4.14□□□□□ -1.75
CLCNKAP51800 AL390838.2-201ENST00000602394 274 ntBASIC4.14□□□□□ -1.75
CLCNKAP51800 Z99497.2-201ENST00000603634 310 ntBASIC4.14□□□□□ -1.75
CLCNKAP51800 AC105429.2-201ENST00000610567 517 ntBASIC4.14□□□□□ -1.75
CLCNKAP51800 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.14□□□□□ -1.75
CLCNKAP51800 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.14□□□□□ -1.75
CLCNKAP51800 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.14□□□□□ -1.75
CLCNKAP51800 ZNF542P-204ENST00000482727 1305 ntBASIC4.14□□□□□ -1.75
CLCNKAP51800 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.14□□□□□ -1.75
CLCNKAP51800 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
CLCNKAP51800 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CLCNKAP51800 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CLCNKAP51800 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.13□□□□□ -1.75
CLCNKAP51800 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
CLCNKAP51800 AL121657.1-201ENST00000327215 531 ntBASIC4.13□□□□□ -1.75
CLCNKAP51800 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
CLCNKAP51800 RN7SKP177-201ENST00000410567 355 ntBASIC4.13□□□□□ -1.75
CLCNKAP51800 LUZP4P1-201ENST00000415420 344 ntBASIC4.13□□□□□ -1.75
CLCNKAP51800 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC4.13□□□□□ -1.75
CLCNKAP51800 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC4.13□□□□□ -1.75
CLCNKAP51800 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.13□□□□□ -1.75
CLCNKAP51800 AC008065.1-201ENST00000428525 348 ntBASIC4.13□□□□□ -1.75
CLCNKAP51800 YWHAZP7-201ENST00000436906 631 ntBASIC4.13□□□□□ -1.75
CLCNKAP51800 RPL23AP46-201ENST00000438548 490 ntBASIC4.13□□□□□ -1.75
CLCNKAP51800 AL354941.1-201ENST00000438600 464 ntBASIC4.13□□□□□ -1.75
CLCNKAP51800 RPL21P133-201ENST00000443666 476 ntBASIC4.13□□□□□ -1.75
CLCNKAP51800 AL034418.1-201ENST00000448675 860 ntBASIC4.13□□□□□ -1.75
CLCNKAP51800 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.13□□□□□ -1.75
CLCNKAP51800 NDUFA5P7-201ENST00000452914 242 ntBASIC4.13□□□□□ -1.75
CLCNKAP51800 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.13□□□□□ -1.75
CLCNKAP51800 AL109741.2-201ENST00000455561 343 ntBASIC4.13□□□□□ -1.75
CLCNKAP51800 SNORD108-201ENST00000459332 71 ntBASIC4.13□□□□□ -1.75
CLCNKAP51800 RPS7P7-201ENST00000463499 571 ntBASIC4.13□□□□□ -1.75
CLCNKAP51800 RPL21P71-201ENST00000465598 459 ntBASIC4.13□□□□□ -1.75
CLCNKAP51800 AC010307.1-201ENST00000467206 836 ntBASIC4.13□□□□□ -1.75
CLCNKAP51800 AC126121.1-201ENST00000482313 553 ntBASIC4.13□□□□□ -1.75
CLCNKAP51800 AF213884.1-201ENST00000488102 463 ntBASIC4.13□□□□□ -1.75
CLCNKAP51800 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.13□□□□□ -1.75
CLCNKAP51800 AC108043.1-201ENST00000512696 574 ntBASIC4.13□□□□□ -1.75
CLCNKAP51800 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.13□□□□□ -1.75
CLCNKAP51800 IGLV3-26-201ENST00000520756 302 ntBASIC4.13□□□□□ -1.75
CLCNKAP51800 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CLCNKAP51800 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.13□□□□□ -1.75
CLCNKAP51800 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC4.13□□□□□ -1.75
CLCNKAP51800 MTCO1P47-201ENST00000523889 1271 ntBASIC4.13□□□□□ -1.75
CLCNKAP51800 PTP4A1P6-201ENST00000531034 478 ntBASIC4.13□□□□□ -1.75
CLCNKAP51800 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.13□□□□□ -1.75
CLCNKAP51800 AC100770.1-201ENST00000532310 322 ntBASIC4.13□□□□□ -1.75
CLCNKAP51800 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.13□□□□□ -1.75
CLCNKAP51800 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC4.13□□□□□ -1.75
CLCNKAP51800 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.13□□□□□ -1.75
CLCNKAP51800 AC007224.1-201ENST00000564410 144 ntBASIC4.13□□□□□ -1.75
CLCNKAP51800 AL121834.1-201ENST00000572284 509 ntBASIC4.13□□□□□ -1.75
CLCNKAP51800 RN7SL600P-201ENST00000581811 299 ntBASIC4.13□□□□□ -1.75
CLCNKAP51800 AC017100.2-201ENST00000584628 355 ntBASIC4.13□□□□□ -1.75
CLCNKAP51800 VN1R82P-201ENST00000601481 356 ntBASIC4.13□□□□□ -1.75
CLCNKAP51800 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.13□□□□□ -1.75
CLCNKAP51800 AC068790.5-201ENST00000602741 355 ntBASIC4.13□□□□□ -1.75
CLCNKAP51800 AC069304.3-201ENST00000603938 1084 ntBASIC4.13□□□□□ -1.75
CLCNKAP51800 AC009220.3-201ENST00000604318 586 ntBASIC4.13□□□□□ -1.75
CLCNKAP51800 AP003117.2-201ENST00000606010 545 ntBASIC4.13□□□□□ -1.75
CLCNKAP51800 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
CLCNKAP51800 AL603755.1-201ENST00000619504 163 ntBASIC4.13□□□□□ -1.75
CLCNKAP51800 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CLCNKAP51800 AC068831.8-201ENST00000620171 435 ntBASIC4.13□□□□□ -1.75
CLCNKAP51800 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
CLCNKAP51800 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC4.13□□□□□ -1.75
CLCNKAP51800 AP003399.1-201ENST00000637534 361 ntBASIC4.13□□□□□ -1.75
CLCNKAP51800 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CLCNKAP51800 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
CLCNKAP51800 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
CLCNKAP51800 ZNF736P9Y-201ENST00000439586 1345 ntBASIC4.13□□□□□ -1.75
CLCNKAP51800 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CLCNKAP51800 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CLCNKAP51800 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CLCNKAP51800 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
CLCNKAP51800 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CLCNKAP51800 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CLCNKAP51800 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
CLCNKAP51800 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
CLCNKAP51800 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CLCNKAP51800 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CLCNKAP51800 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
CLCNKAP51800 RNU1-15P-201ENST00000353977 144 ntBASIC4.12□□□□□ -1.75
CLCNKAP51800 RNU6-492P-201ENST00000363035 104 ntBASIC4.12□□□□□ -1.75
CLCNKAP51800 SUGT1P1-201ENST00000379514 476 ntBASIC4.12□□□□□ -1.75
CLCNKAP51800 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.12□□□□□ -1.75
CLCNKAP51800 AL590084.2-201ENST00000401481 382 ntBASIC4.12□□□□□ -1.75
CLCNKAP51800 AL356967.1-201ENST00000406305 431 ntBASIC4.12□□□□□ -1.75
CLCNKAP51800 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.12□□□□□ -1.75
CLCNKAP51800 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.12□□□□□ -1.75
CLCNKAP51800 AC092634.6-201ENST00000418558 192 ntBASIC4.12□□□□□ -1.75
CLCNKAP51800 AC098592.1-201ENST00000419352 333 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms