Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 AC063923.1-201ENST00000478982 1619 ntBASIC4.94□□□□□ -1.62
SMARCA4P51532 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.94□□□□□ -1.62
SMARCA4P51532 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SMARCA4P51532 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SMARCA4P51532 SNORA46-201ENST00000384762 135 ntBASIC4.94□□□□□ -1.62
SMARCA4P51532 RN7SKP223-201ENST00000410582 62 ntBASIC4.94□□□□□ -1.62
SMARCA4P51532 RAP1BP1-201ENST00000412709 553 ntBASIC4.94□□□□□ -1.62
SMARCA4P51532 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC4.94□□□□□ -1.62
SMARCA4P51532 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.94□□□□□ -1.62
SMARCA4P51532 AC078817.1-201ENST00000492623 435 ntBASIC4.94□□□□□ -1.62
SMARCA4P51532 IGKV3-31-201ENST00000523109 329 ntBASIC4.94□□□□□ -1.62
SMARCA4P51532 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SMARCA4P51532 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.94□□□□□ -1.62
SMARCA4P51532 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC4.93□□□□□ -1.62
SMARCA4P51532 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SMARCA4P51532 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
SMARCA4P51532 ATF1P1-201ENST00000406040 927 ntBASIC4.93□□□□□ -1.62
SMARCA4P51532 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC4.93□□□□□ -1.62
SMARCA4P51532 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.93□□□□□ -1.62
SMARCA4P51532 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.93□□□□□ -1.62
SMARCA4P51532 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC4.93□□□□□ -1.62
SMARCA4P51532 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC4.93□□□□□ -1.62
SMARCA4P51532 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
SMARCA4P51532 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
SMARCA4P51532 AC008725.1-201ENST00000605123 2263 ntBASIC4.92□□□□□ -1.62
SMARCA4P51532 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SMARCA4P51532 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SMARCA4P51532 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC4.92□□□□□ -1.62
SMARCA4P51532 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.92□□□□□ -1.62
SMARCA4P51532 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.92□□□□□ -1.62
SMARCA4P51532 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SMARCA4P51532 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
SMARCA4P51532 MIR518C-201ENST00000384822 101 ntBASIC4.92□□□□□ -1.62
SMARCA4P51532 RNA5SP274-201ENST00000410484 108 ntBASIC4.92□□□□□ -1.62
SMARCA4P51532 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC4.92□□□□□ -1.62
SMARCA4P51532 SRIP2-201ENST00000428470 166 ntBASIC4.92□□□□□ -1.62
SMARCA4P51532 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
SMARCA4P51532 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.92□□□□□ -1.62
SMARCA4P51532 AL513043.1-201ENST00000439124 535 ntBASIC4.92□□□□□ -1.62
SMARCA4P51532 IGKV2D-23-201ENST00000518179 286 ntBASIC4.92□□□□□ -1.62
SMARCA4P51532 AC243972.3-201ENST00000539655 198 ntBASIC4.92□□□□□ -1.62
SMARCA4P51532 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC4.92□□□□□ -1.62
SMARCA4P51532 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.92□□□□□ -1.62
SMARCA4P51532 OOSP1P2-201ENST00000579644 351 ntBASIC4.92□□□□□ -1.62
SMARCA4P51532 SNORD53-201ENST00000579969 78 ntBASIC4.92□□□□□ -1.62
SMARCA4P51532 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC4.92□□□□□ -1.62
SMARCA4P51532 AL353684.1-201ENST00000622677 1120 ntBASIC4.92□□□□□ -1.62
SMARCA4P51532 AL513477.1-202ENST00000417061 214 ntBASIC4.91□□□□□ -1.62
SMARCA4P51532 GTF2IP23-201ENST00000423746 351 ntBASIC4.91□□□□□ -1.62
SMARCA4P51532 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.91□□□□□ -1.62
SMARCA4P51532 RPL23AP23-201ENST00000452590 471 ntBASIC4.91□□□□□ -1.62
SMARCA4P51532 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC4.91□□□□□ -1.62
SMARCA4P51532 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.91□□□□□ -1.62
SMARCA4P51532 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC4.91□□□□□ -1.62
SMARCA4P51532 EEF1A1P37-201ENST00000522748 715 ntBASIC4.91□□□□□ -1.62
SMARCA4P51532 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
SMARCA4P51532 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC4.91□□□□□ -1.62
SMARCA4P51532 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC4.91□□□□□ -1.62
SMARCA4P51532 AC007424.1-203ENST00000554613 687 ntBASIC4.91□□□□□ -1.62
SMARCA4P51532 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
SMARCA4P51532 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.91□□□□□ -1.62
SMARCA4P51532 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.91□□□□□ -1.62
SMARCA4P51532 SKINT1L-201ENST00000401057 817 ntBASIC4.9□□□□□ -1.62
SMARCA4P51532 RPS4XP7-201ENST00000406274 780 ntBASIC4.9□□□□□ -1.62
SMARCA4P51532 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC4.9□□□□□ -1.62
SMARCA4P51532 AL591623.2-201ENST00000449978 222 ntBASIC4.9□□□□□ -1.62
SMARCA4P51532 SNRPGP5-201ENST00000456003 220 ntBASIC4.9□□□□□ -1.62
SMARCA4P51532 AC021205.1-201ENST00000468797 348 ntBASIC4.9□□□□□ -1.62
SMARCA4P51532 RN7SL330P-201ENST00000469709 307 ntBASIC4.9□□□□□ -1.62
SMARCA4P51532 DNAJC19P3-201ENST00000594491 331 ntBASIC4.9□□□□□ -1.62
SMARCA4P51532 AL355493.4-201ENST00000618530 292 ntBASIC4.9□□□□□ -1.62
SMARCA4P51532 CTSLP2-204ENST00000629029 392 ntBASIC4.9□□□□□ -1.62
SMARCA4P51532 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
SMARCA4P51532 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.9□□□□□ -1.63
SMARCA4P51532 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SMARCA4P51532 U3.11-201ENST00000364476 212 ntBASIC4.9□□□□□ -1.63
SMARCA4P51532 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SMARCA4P51532 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.9□□□□□ -1.63
SMARCA4P51532 AC005189.1-201ENST00000431286 310 ntBASIC4.9□□□□□ -1.63
SMARCA4P51532 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC4.9□□□□□ -1.63
SMARCA4P51532 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC4.9□□□□□ -1.63
SMARCA4P51532 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC4.9□□□□□ -1.63
SMARCA4P51532 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.9□□□□□ -1.63
SMARCA4P51532 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC4.9□□□□□ -1.63
SMARCA4P51532 AL365503.1-201ENST00000605247 905 ntBASIC4.9□□□□□ -1.63
SMARCA4P51532 AC241585.2-209ENST00000638217 143 ntBASIC4.9□□□□□ -1.63
SMARCA4P51532 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
SMARCA4P51532 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
SMARCA4P51532 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SMARCA4P51532 AC112220.1-201ENST00000434628 355 ntBASIC4.89□□□□□ -1.63
SMARCA4P51532 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC4.89□□□□□ -1.63
SMARCA4P51532 WASF1P1-201ENST00000447560 1131 ntBASIC4.89□□□□□ -1.63
SMARCA4P51532 snoU13.23-201ENST00000458863 104 ntBASIC4.89□□□□□ -1.63
SMARCA4P51532 UBTFL10-201ENST00000528532 562 ntBASIC4.89□□□□□ -1.63
SMARCA4P51532 AL158827.2-201ENST00000602494 330 ntBASIC4.89□□□□□ -1.63
SMARCA4P51532 AL691447.3-201ENST00000635020 330 ntBASIC4.89□□□□□ -1.63
SMARCA4P51532 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
SMARCA4P51532 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SMARCA4P51532 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
SMARCA4P51532 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms