Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 AC068135.1-201ENST00000446164 246 ntBASIC3.16□□□□□ -1.9
CSNK1A1P48729 SNORD105B-201ENST00000458770 79 ntBASIC3.16□□□□□ -1.9
CSNK1A1P48729 RPL7P15-201ENST00000461190 712 ntBASIC3.16□□□□□ -1.9
CSNK1A1P48729 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.16□□□□□ -1.9
CSNK1A1P48729 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CSNK1A1P48729 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.16□□□□□ -1.9
CSNK1A1P48729 AC002456.2-201ENST00000509356 380 ntBASIC3.16□□□□□ -1.9
CSNK1A1P48729 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.16□□□□□ -1.9
CSNK1A1P48729 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.16□□□□□ -1.9
CSNK1A1P48729 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.16□□□□□ -1.9
CSNK1A1P48729 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.16□□□□□ -1.9
CSNK1A1P48729 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.16□□□□□ -1.9
CSNK1A1P48729 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.16□□□□□ -1.9
CSNK1A1P48729 AL442163.2-201ENST00000553912 710 ntBASIC3.16□□□□□ -1.9
CSNK1A1P48729 AL389895.1-201ENST00000554127 252 ntBASIC3.16□□□□□ -1.9
CSNK1A1P48729 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.16□□□□□ -1.9
CSNK1A1P48729 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.16□□□□□ -1.9
CSNK1A1P48729 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC3.16□□□□□ -1.9
CSNK1A1P48729 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.16□□□□□ -1.9
CSNK1A1P48729 IGHV3-29-201ENST00000604817 344 ntBASIC3.16□□□□□ -1.9
CSNK1A1P48729 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3.16□□□□□ -1.9
CSNK1A1P48729 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.16□□□□□ -1.9
CSNK1A1P48729 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.16□□□□□ -1.9
CSNK1A1P48729 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.16□□□□□ -1.9
CSNK1A1P48729 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.16□□□□□ -1.9
CSNK1A1P48729 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CSNK1A1P48729 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.16□□□□□ -1.9
CSNK1A1P48729 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CSNK1A1P48729 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
CSNK1A1P48729 ZNF37BP-203ENST00000452306 1352 ntBASIC3.15□□□□□ -1.9
CSNK1A1P48729 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.15□□□□□ -1.9
CSNK1A1P48729 AC010733.2-201ENST00000589496 5702 ntBASIC3.15□□□□□ -1.9
CSNK1A1P48729 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CSNK1A1P48729 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
CSNK1A1P48729 Y_RNA.126-201ENST00000363382 111 ntBASIC3.15□□□□□ -1.91
CSNK1A1P48729 MIR184-201ENST00000384962 84 ntBASIC3.15□□□□□ -1.91
CSNK1A1P48729 MIR591-201ENST00000385290 95 ntBASIC3.15□□□□□ -1.91
CSNK1A1P48729 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CSNK1A1P48729 AC025750.1-201ENST00000399891 379 ntBASIC3.15□□□□□ -1.91
CSNK1A1P48729 SFR1P1-201ENST00000403720 688 ntBASIC3.15□□□□□ -1.91
CSNK1A1P48729 AL356967.1-201ENST00000406305 431 ntBASIC3.15□□□□□ -1.91
CSNK1A1P48729 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.15□□□□□ -1.91
CSNK1A1P48729 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.15□□□□□ -1.91
CSNK1A1P48729 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.15□□□□□ -1.91
CSNK1A1P48729 MTND4P22-201ENST00000413116 1169 ntBASIC3.15□□□□□ -1.91
CSNK1A1P48729 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.15□□□□□ -1.91
CSNK1A1P48729 AIMP1P1-201ENST00000418670 937 ntBASIC3.15□□□□□ -1.91
CSNK1A1P48729 NEK4P1-201ENST00000433383 879 ntBASIC3.15□□□□□ -1.91
CSNK1A1P48729 AL512661.1-201ENST00000434586 1253 ntBASIC3.15□□□□□ -1.91
CSNK1A1P48729 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.15□□□□□ -1.91
CSNK1A1P48729 HMGB1P38-201ENST00000490557 577 ntBASIC3.15□□□□□ -1.91
CSNK1A1P48729 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.15□□□□□ -1.91
CSNK1A1P48729 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.15□□□□□ -1.91
CSNK1A1P48729 RN7SKP60-201ENST00000516985 239 ntBASIC3.15□□□□□ -1.91
CSNK1A1P48729 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.15□□□□□ -1.91
CSNK1A1P48729 IGKV2D-19-201ENST00000523346 262 ntBASIC3.15□□□□□ -1.91
CSNK1A1P48729 AC083923.1-201ENST00000523708 376 ntBASIC3.15□□□□□ -1.91
CSNK1A1P48729 AL139174.1-201ENST00000531489 886 ntBASIC3.15□□□□□ -1.91
CSNK1A1P48729 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
CSNK1A1P48729 OSBPL9P3-201ENST00000534523 595 ntBASIC3.15□□□□□ -1.91
CSNK1A1P48729 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.15□□□□□ -1.91
CSNK1A1P48729 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.15□□□□□ -1.91
CSNK1A1P48729 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.15□□□□□ -1.91
CSNK1A1P48729 AC104229.1-201ENST00000561364 255 ntBASIC3.15□□□□□ -1.91
CSNK1A1P48729 MTCYBP28-201ENST00000566728 1132 ntBASIC3.15□□□□□ -1.91
CSNK1A1P48729 AC106734.1-201ENST00000568646 663 ntBASIC3.15□□□□□ -1.91
CSNK1A1P48729 AC006116.10-201ENST00000591836 581 ntBASIC3.15□□□□□ -1.91
CSNK1A1P48729 AL121772.2-201ENST00000614331 297 ntBASIC3.15□□□□□ -1.91
CSNK1A1P48729 AL162574.2-201ENST00000614618 657 ntBASIC3.15□□□□□ -1.91
CSNK1A1P48729 AC018926.3-201ENST00000618841 406 ntBASIC3.15□□□□□ -1.91
CSNK1A1P48729 PLCE1P1-201ENST00000622094 305 ntBASIC3.15□□□□□ -1.91
CSNK1A1P48729 AC097460.3-201ENST00000623099 442 ntBASIC3.15□□□□□ -1.91
CSNK1A1P48729 AL356863.1-201ENST00000623378 1080 ntBASIC3.15□□□□□ -1.91
CSNK1A1P48729 AL356094.1-201ENST00000624663 1212 ntBASIC3.15□□□□□ -1.91
CSNK1A1P48729 MIR7153-201ENST00000637758 57 ntBASIC3.15□□□□□ -1.91
CSNK1A1P48729 AC021755.1-201ENST00000559747 1447 ntBASIC3.15□□□□□ -1.91
CSNK1A1P48729 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.15□□□□□ -1.91
CSNK1A1P48729 AC107081.3-201ENST00000612715 2034 ntBASIC3.15□□□□□ -1.91
CSNK1A1P48729 MFSD8-213ENST00000641134 1327 ntBASIC3.15□□□□□ -1.91
CSNK1A1P48729 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
CSNK1A1P48729 ZNF285B-201ENST00000561698 1767 ntBASIC3.15□□□□□ -1.91
CSNK1A1P48729 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CSNK1A1P48729 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.14□□□□□ -1.91
CSNK1A1P48729 ELL2P4-201ENST00000446870 1376 ntBASIC3.14□□□□□ -1.91
CSNK1A1P48729 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CSNK1A1P48729 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.14□□□□□ -1.91
CSNK1A1P48729 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.14□□□□□ -1.91
CSNK1A1P48729 MTCO1P18-201ENST00000455518 1419 ntBASIC3.14□□□□□ -1.91
CSNK1A1P48729 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CSNK1A1P48729 RNU6-600P-201ENST00000362524 99 ntBASIC3.14□□□□□ -1.91
CSNK1A1P48729 RNU6-1243P-201ENST00000364028 107 ntBASIC3.14□□□□□ -1.91
CSNK1A1P48729 FABP12P1-201ENST00000401911 322 ntBASIC3.14□□□□□ -1.91
CSNK1A1P48729 RNU2-71P-201ENST00000411395 189 ntBASIC3.14□□□□□ -1.91
CSNK1A1P48729 UBE2V1P11-201ENST00000411559 285 ntBASIC3.14□□□□□ -1.91
CSNK1A1P48729 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.14□□□□□ -1.91
CSNK1A1P48729 AL158050.1-201ENST00000416077 457 ntBASIC3.14□□□□□ -1.91
CSNK1A1P48729 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.14□□□□□ -1.91
CSNK1A1P48729 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CSNK1A1P48729 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.14□□□□□ -1.91
CSNK1A1P48729 ETF1P3-201ENST00000430422 1160 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms