Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 FTLP6-201ENST00000355274 422 ntBASIC3.24□□□□□ -1.89
CXCL12P48061 SNORA71.1-201ENST00000364523 117 ntBASIC3.24□□□□□ -1.89
CXCL12P48061 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CXCL12P48061 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.24□□□□□ -1.89
CXCL12P48061 AC126124.2-201ENST00000413542 321 ntBASIC3.24□□□□□ -1.89
CXCL12P48061 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC3.24□□□□□ -1.89
CXCL12P48061 MTND2P11-201ENST00000423638 648 ntBASIC3.24□□□□□ -1.89
CXCL12P48061 MTND4LP14-201ENST00000429447 288 ntBASIC3.24□□□□□ -1.89
CXCL12P48061 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CXCL12P48061 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.24□□□□□ -1.89
CXCL12P48061 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC3.24□□□□□ -1.89
CXCL12P48061 RPL7P59-201ENST00000447700 943 ntBASIC3.24□□□□□ -1.89
CXCL12P48061 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.24□□□□□ -1.89
CXCL12P48061 RNU7-27P-201ENST00000459281 62 ntBASIC3.24□□□□□ -1.89
CXCL12P48061 AC107398.1-201ENST00000486904 505 ntBASIC3.24□□□□□ -1.89
CXCL12P48061 AC005912.1-201ENST00000495392 255 ntBASIC3.24□□□□□ -1.89
CXCL12P48061 AC010627.1-201ENST00000503819 1294 ntBASIC3.24□□□□□ -1.89
CXCL12P48061 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.24□□□□□ -1.89
CXCL12P48061 AC108120.2-201ENST00000512973 294 ntBASIC3.24□□□□□ -1.89
CXCL12P48061 HNRNPKP5-201ENST00000515300 253 ntBASIC3.24□□□□□ -1.89
CXCL12P48061 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC3.24□□□□□ -1.89
CXCL12P48061 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CXCL12P48061 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC3.24□□□□□ -1.89
CXCL12P48061 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.24□□□□□ -1.89
CXCL12P48061 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.24□□□□□ -1.89
CXCL12P48061 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.24□□□□□ -1.89
CXCL12P48061 UBL5P2-201ENST00000583788 219 ntBASIC3.24□□□□□ -1.89
CXCL12P48061 AC015911.5-201ENST00000587076 451 ntBASIC3.24□□□□□ -1.89
CXCL12P48061 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.24□□□□□ -1.89
CXCL12P48061 uc_338.1-201ENST00000612113 180 ntBASIC3.24□□□□□ -1.89
CXCL12P48061 AC107308.1-201ENST00000615897 301 ntBASIC3.24□□□□□ -1.89
CXCL12P48061 AC103858.2-201ENST00000621471 543 ntBASIC3.24□□□□□ -1.89
CXCL12P48061 C2orf27A-204ENST00000623058 969 ntBASIC3.24□□□□□ -1.89
CXCL12P48061 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.24□□□□□ -1.89
CXCL12P48061 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.24□□□□□ -1.89
CXCL12P48061 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
CXCL12P48061 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CXCL12P48061 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CXCL12P48061 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
CXCL12P48061 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CXCL12P48061 AC017007.4-201ENST00000503353 1352 ntBASIC3.24□□□□□ -1.89
CXCL12P48061 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CXCL12P48061 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CXCL12P48061 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CXCL12P48061 AL513302.2-201ENST00000562313 1842 ntBASIC3.23□□□□□ -1.89
CXCL12P48061 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
CXCL12P48061 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CXCL12P48061 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CXCL12P48061 RNU6-883P-201ENST00000384597 107 ntBASIC3.23□□□□□ -1.89
CXCL12P48061 HMGN2P8-201ENST00000391458 268 ntBASIC3.23□□□□□ -1.89
CXCL12P48061 ZNF603P-201ENST00000405613 487 ntBASIC3.23□□□□□ -1.89
CXCL12P48061 USP12PY-201ENST00000427677 1064 ntBASIC3.23□□□□□ -1.89
CXCL12P48061 AC022018.1-201ENST00000430685 241 ntBASIC3.23□□□□□ -1.89
CXCL12P48061 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.23□□□□□ -1.89
CXCL12P48061 AL691517.1-201ENST00000440833 1235 ntBASIC3.23□□□□□ -1.89
CXCL12P48061 MTND5P8-201ENST00000449817 1083 ntBASIC3.23□□□□□ -1.89
CXCL12P48061 HMGB3P21-201ENST00000452483 547 ntBASIC3.23□□□□□ -1.89
CXCL12P48061 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CXCL12P48061 RPL7P48-201ENST00000461513 746 ntBASIC3.23□□□□□ -1.89
CXCL12P48061 AC087312.1-201ENST00000471411 480 ntBASIC3.23□□□□□ -1.89
CXCL12P48061 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.23□□□□□ -1.89
CXCL12P48061 AC025181.1-201ENST00000477507 416 ntBASIC3.23□□□□□ -1.89
CXCL12P48061 SYT14P1-201ENST00000481459 721 ntBASIC3.23□□□□□ -1.89
CXCL12P48061 OR2A20P-203ENST00000498397 1268 ntBASIC3.23□□□□□ -1.89
CXCL12P48061 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC3.23□□□□□ -1.89
CXCL12P48061 VN1R104P-201ENST00000505115 1009 ntBASIC3.23□□□□□ -1.89
CXCL12P48061 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CXCL12P48061 RNU6-1004P-201ENST00000516584 111 ntBASIC3.23□□□□□ -1.89
CXCL12P48061 MIR2114-201ENST00000516645 80 ntBASIC3.23□□□□□ -1.89
CXCL12P48061 RNA5SP309-201ENST00000516670 106 ntBASIC3.23□□□□□ -1.89
CXCL12P48061 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.23□□□□□ -1.89
CXCL12P48061 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.23□□□□□ -1.89
CXCL12P48061 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.23□□□□□ -1.89
CXCL12P48061 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.23□□□□□ -1.89
CXCL12P48061 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.23□□□□□ -1.89
CXCL12P48061 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.23□□□□□ -1.89
CXCL12P48061 AC022149.2-201ENST00000621061 203 ntBASIC3.23□□□□□ -1.89
CXCL12P48061 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC3.23□□□□□ -1.89
CXCL12P48061 AC099506.2-201ENST00000623074 221 ntBASIC3.23□□□□□ -1.89
CXCL12P48061 AC110801.1-201ENST00000623590 212 ntBASIC3.23□□□□□ -1.89
CXCL12P48061 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.23□□□□□ -1.89
CXCL12P48061 CFTRP2-201ENST00000634304 199 ntBASIC3.23□□□□□ -1.89
CXCL12P48061 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.23□□□□□ -1.89
CXCL12P48061 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CXCL12P48061 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.23□□□□□ -1.89
CXCL12P48061 AC017071.1-201ENST00000564407 2204 ntBASIC3.23□□□□□ -1.89
CXCL12P48061 AC090229.1-201ENST00000590983 1609 ntBASIC3.22□□□□□ -1.89
CXCL12P48061 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CXCL12P48061 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.22□□□□□ -1.89
CXCL12P48061 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.22□□□□□ -1.89
CXCL12P48061 OR1S2-201ENST00000302592 978 ntBASIC3.22□□□□□ -1.89
CXCL12P48061 RNU6-304P-201ENST00000364855 107 ntBASIC3.22□□□□□ -1.89
CXCL12P48061 SNORD6-201ENST00000365444 73 ntBASIC3.22□□□□□ -1.89
CXCL12P48061 RNA5SP80-201ENST00000410475 111 ntBASIC3.22□□□□□ -1.89
CXCL12P48061 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.22□□□□□ -1.89
CXCL12P48061 PTP4A1P5-201ENST00000420305 455 ntBASIC3.22□□□□□ -1.89
CXCL12P48061 AC012065.2-201ENST00000421295 375 ntBASIC3.22□□□□□ -1.89
CXCL12P48061 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.22□□□□□ -1.89
CXCL12P48061 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC3.22□□□□□ -1.89
CXCL12P48061 ZFAND6P1-201ENST00000434138 605 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms