Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 NSRP1P1-201ENST00000444067 1693 ntBASIC4.04□□□□□ -1.76
NEDD4P46934 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NEDD4P46934 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NEDD4P46934 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC4.03□□□□□ -1.76
NEDD4P46934 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NEDD4P46934 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
NEDD4P46934 MIR30E-201ENST00000362104 92 ntBASIC4.03□□□□□ -1.76
NEDD4P46934 RNU5B-1-201ENST00000363286 116 ntBASIC4.03□□□□□ -1.76
NEDD4P46934 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
NEDD4P46934 OR52E6-202ENST00000379946 954 ntBASIC4.03□□□□□ -1.76
NEDD4P46934 RNU2-65P-201ENST00000410162 185 ntBASIC4.03□□□□□ -1.76
NEDD4P46934 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.03□□□□□ -1.76
NEDD4P46934 LIPT1P1-201ENST00000415870 1186 ntBASIC4.03□□□□□ -1.76
NEDD4P46934 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.03□□□□□ -1.76
NEDD4P46934 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.03□□□□□ -1.76
NEDD4P46934 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.03□□□□□ -1.76
NEDD4P46934 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC4.03□□□□□ -1.76
NEDD4P46934 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC4.03□□□□□ -1.76
NEDD4P46934 AL357552.1-201ENST00000445254 415 ntBASIC4.03□□□□□ -1.76
NEDD4P46934 AL050341.1-201ENST00000447743 313 ntBASIC4.03□□□□□ -1.76
NEDD4P46934 OR51B8P-201ENST00000449892 769 ntBASIC4.03□□□□□ -1.76
NEDD4P46934 AC004801.2-202ENST00000463559 283 ntBASIC4.03□□□□□ -1.76
NEDD4P46934 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.03□□□□□ -1.76
NEDD4P46934 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC4.03□□□□□ -1.76
NEDD4P46934 AC104982.1-201ENST00000478775 574 ntBASIC4.03□□□□□ -1.76
NEDD4P46934 AL035404.1-201ENST00000497982 568 ntBASIC4.03□□□□□ -1.76
NEDD4P46934 SUMO2P5-201ENST00000506790 245 ntBASIC4.03□□□□□ -1.76
NEDD4P46934 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
NEDD4P46934 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.03□□□□□ -1.76
NEDD4P46934 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.03□□□□□ -1.76
NEDD4P46934 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.03□□□□□ -1.76
NEDD4P46934 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC4.03□□□□□ -1.76
NEDD4P46934 AC118942.1-201ENST00000529674 1035 ntBASIC4.03□□□□□ -1.76
NEDD4P46934 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.03□□□□□ -1.76
NEDD4P46934 MIR5186-201ENST00000577504 120 ntBASIC4.03□□□□□ -1.76
NEDD4P46934 MIR4425-201ENST00000580572 84 ntBASIC4.03□□□□□ -1.76
NEDD4P46934 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.03□□□□□ -1.76
NEDD4P46934 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.03□□□□□ -1.76
NEDD4P46934 VN1R87P-201ENST00000596706 487 ntBASIC4.03□□□□□ -1.76
NEDD4P46934 AL034351.1-201ENST00000605288 668 ntBASIC4.03□□□□□ -1.76
NEDD4P46934 AC018754.1-201ENST00000607486 925 ntBASIC4.03□□□□□ -1.76
NEDD4P46934 AC099654.9-201ENST00000637055 678 ntBASIC4.03□□□□□ -1.76
NEDD4P46934 AC099654.8-201ENST00000637757 681 ntBASIC4.03□□□□□ -1.76
NEDD4P46934 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC4.03□□□□□ -1.76
NEDD4P46934 PHKBP1-201ENST00000450951 1951 ntBASIC4.03□□□□□ -1.76
NEDD4P46934 TNPO1P3-201ENST00000436471 2662 ntBASIC4.03□□□□□ -1.76
NEDD4P46934 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NEDD4P46934 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.03□□□□□ -1.76
NEDD4P46934 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.03□□□□□ -1.76
NEDD4P46934 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.03□□□□□ -1.76
NEDD4P46934 AL118496.1-201ENST00000440201 1812 ntBASIC4.03□□□□□ -1.76
NEDD4P46934 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NEDD4P46934 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.03□□□□□ -1.77
NEDD4P46934 RNU6-1339P-201ENST00000363574 91 ntBASIC4.02□□□□□ -1.77
NEDD4P46934 RNU6-236P-201ENST00000363886 106 ntBASIC4.02□□□□□ -1.77
NEDD4P46934 MIR525-201ENST00000384978 85 ntBASIC4.02□□□□□ -1.77
NEDD4P46934 RNU6-298P-201ENST00000390888 96 ntBASIC4.02□□□□□ -1.77
NEDD4P46934 AC093719.1-202ENST00000392735 373 ntBASIC4.02□□□□□ -1.77
NEDD4P46934 BX842559.1-201ENST00000419615 532 ntBASIC4.02□□□□□ -1.77
NEDD4P46934 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.02□□□□□ -1.77
NEDD4P46934 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
NEDD4P46934 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC4.02□□□□□ -1.77
NEDD4P46934 AL592437.1-201ENST00000443781 492 ntBASIC4.02□□□□□ -1.77
NEDD4P46934 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.02□□□□□ -1.77
NEDD4P46934 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.02□□□□□ -1.77
NEDD4P46934 MTND2P8-201ENST00000450555 1025 ntBASIC4.02□□□□□ -1.77
NEDD4P46934 AC034236.1-201ENST00000469891 373 ntBASIC4.02□□□□□ -1.77
NEDD4P46934 RPL21P13-201ENST00000488305 481 ntBASIC4.02□□□□□ -1.77
NEDD4P46934 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.02□□□□□ -1.77
NEDD4P46934 MIR2276-201ENST00000516886 89 ntBASIC4.02□□□□□ -1.77
NEDD4P46934 DUXAP2-201ENST00000519198 589 ntBASIC4.02□□□□□ -1.77
NEDD4P46934 IGKV2-36-201ENST00000519999 223 ntBASIC4.02□□□□□ -1.77
NEDD4P46934 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC4.02□□□□□ -1.77
NEDD4P46934 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.02□□□□□ -1.77
NEDD4P46934 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC4.02□□□□□ -1.77
NEDD4P46934 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.02□□□□□ -1.77
NEDD4P46934 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.02□□□□□ -1.77
NEDD4P46934 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC4.02□□□□□ -1.77
NEDD4P46934 MIR7975-201ENST00000619350 68 ntBASIC4.02□□□□□ -1.77
NEDD4P46934 AC244100.1-202ENST00000621554 382 ntBASIC4.02□□□□□ -1.77
NEDD4P46934 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.02□□□□□ -1.77
NEDD4P46934 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
NEDD4P46934 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.02□□□□□ -1.77
NEDD4P46934 AC007390.2-201ENST00000606229 3803 ntBASIC4.02□□□□□ -1.77
NEDD4P46934 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
NEDD4P46934 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
NEDD4P46934 AC022031.1-201ENST00000585985 2593 ntBASIC4.02□□□□□ -1.77
NEDD4P46934 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
NEDD4P46934 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.01□□□□□ -1.77
NEDD4P46934 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
NEDD4P46934 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
NEDD4P46934 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
NEDD4P46934 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
NEDD4P46934 SNORA63.1-201ENST00000362493 131 ntBASIC4.01□□□□□ -1.77
NEDD4P46934 RNU6-984P-201ENST00000363236 109 ntBASIC4.01□□□□□ -1.77
NEDD4P46934 RNA5SP50-201ENST00000363731 107 ntBASIC4.01□□□□□ -1.77
NEDD4P46934 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.01□□□□□ -1.77
NEDD4P46934 MIR1303-201ENST00000408625 86 ntBASIC4.01□□□□□ -1.77
NEDD4P46934 RN7SKP111-201ENST00000410349 271 ntBASIC4.01□□□□□ -1.77
NEDD4P46934 AC093698.1-201ENST00000423843 571 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms