Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.8□□□□□ -1.64
SLC6A4P31645 MIR4284-201ENST00000578924 81 ntBASIC4.8□□□□□ -1.64
SLC6A4P31645 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.8□□□□□ -1.64
SLC6A4P31645 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.8□□□□□ -1.64
SLC6A4P31645 AL109618.2-201ENST00000605527 211 ntBASIC4.8□□□□□ -1.64
SLC6A4P31645 AC024941.1-201ENST00000612250 334 ntBASIC4.8□□□□□ -1.64
SLC6A4P31645 AC013476.2-201ENST00000614456 459 ntBASIC4.8□□□□□ -1.64
SLC6A4P31645 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.8□□□□□ -1.64
SLC6A4P31645 AC027807.2-201ENST00000616099 408 ntBASIC4.8□□□□□ -1.64
SLC6A4P31645 AP001642.1-201ENST00000624727 2117 ntBASIC4.8□□□□□ -1.64
SLC6A4P31645 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
SLC6A4P31645 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
SLC6A4P31645 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SLC6A4P31645 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
SLC6A4P31645 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SLC6A4P31645 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SLC6A4P31645 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SLC6A4P31645 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SLC6A4P31645 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
SLC6A4P31645 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
SLC6A4P31645 AC012020.1-201ENST00000624541 1728 ntBASIC4.8□□□□□ -1.64
SLC6A4P31645 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.8□□□□□ -1.64
SLC6A4P31645 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.8□□□□□ -1.64
SLC6A4P31645 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SLC6A4P31645 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
SLC6A4P31645 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.79□□□□□ -1.64
SLC6A4P31645 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
SLC6A4P31645 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SLC6A4P31645 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
SLC6A4P31645 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SLC6A4P31645 AL672167.1-204ENST00000641875 3017 ntBASIC4.79□□□□□ -1.64
SLC6A4P31645 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
SLC6A4P31645 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.79□□□□□ -1.64
SLC6A4P31645 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SLC6A4P31645 AC021146.4-201ENST00000309229 279 ntBASIC4.79□□□□□ -1.64
SLC6A4P31645 RNU6-441P-201ENST00000384545 106 ntBASIC4.79□□□□□ -1.64
SLC6A4P31645 MIR649-201ENST00000384843 97 ntBASIC4.79□□□□□ -1.64
SLC6A4P31645 MIR1305-201ENST00000408300 86 ntBASIC4.79□□□□□ -1.64
SLC6A4P31645 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SLC6A4P31645 RN7SKP266-201ENST00000410232 287 ntBASIC4.79□□□□□ -1.64
SLC6A4P31645 Y_RNA.598-201ENST00000410480 95 ntBASIC4.79□□□□□ -1.64
SLC6A4P31645 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.79□□□□□ -1.64
SLC6A4P31645 RPEP3-201ENST00000425462 676 ntBASIC4.79□□□□□ -1.64
SLC6A4P31645 AC096632.1-201ENST00000427395 310 ntBASIC4.79□□□□□ -1.64
SLC6A4P31645 RPL23AP1-201ENST00000428990 471 ntBASIC4.79□□□□□ -1.64
SLC6A4P31645 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.79□□□□□ -1.64
SLC6A4P31645 ARL2BPP10-201ENST00000446487 531 ntBASIC4.79□□□□□ -1.64
SLC6A4P31645 PAXBP1P1-201ENST00000449315 447 ntBASIC4.79□□□□□ -1.64
SLC6A4P31645 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC4.79□□□□□ -1.64
SLC6A4P31645 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC4.79□□□□□ -1.64
SLC6A4P31645 RPS15AP17-201ENST00000470598 390 ntBASIC4.79□□□□□ -1.64
SLC6A4P31645 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.79□□□□□ -1.64
SLC6A4P31645 LARP1BP2-201ENST00000486594 519 ntBASIC4.79□□□□□ -1.64
SLC6A4P31645 AC023424.2-201ENST00000493479 777 ntBASIC4.79□□□□□ -1.64
SLC6A4P31645 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.79□□□□□ -1.64
SLC6A4P31645 RN7SKP92-201ENST00000517266 244 ntBASIC4.79□□□□□ -1.64
SLC6A4P31645 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.79□□□□□ -1.64
SLC6A4P31645 AP001781.1-201ENST00000530977 207 ntBASIC4.79□□□□□ -1.64
SLC6A4P31645 AC008127.2-201ENST00000549925 1075 ntBASIC4.79□□□□□ -1.64
SLC6A4P31645 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.79□□□□□ -1.64
SLC6A4P31645 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC4.79□□□□□ -1.64
SLC6A4P31645 AC074050.1-201ENST00000563247 211 ntBASIC4.79□□□□□ -1.64
SLC6A4P31645 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.79□□□□□ -1.64
SLC6A4P31645 BNIP3P23-201ENST00000599655 511 ntBASIC4.79□□□□□ -1.64
SLC6A4P31645 AC015871.2-201ENST00000603605 948 ntBASIC4.79□□□□□ -1.64
SLC6A4P31645 AC126118.1-201ENST00000607744 628 ntBASIC4.79□□□□□ -1.64
SLC6A4P31645 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.79□□□□□ -1.64
SLC6A4P31645 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.79□□□□□ -1.64
SLC6A4P31645 AC019193.2-201ENST00000610012 634 ntBASIC4.79□□□□□ -1.64
SLC6A4P31645 AC025588.4-201ENST00000615802 908 ntBASIC4.79□□□□□ -1.64
SLC6A4P31645 AL603839.4-201ENST00000624658 1005 ntBASIC4.79□□□□□ -1.64
SLC6A4P31645 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.79□□□□□ -1.64
SLC6A4P31645 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
SLC6A4P31645 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.79□□□□□ -1.64
SLC6A4P31645 AP000756.2-201ENST00000624168 2567 ntBASIC4.79□□□□□ -1.64
SLC6A4P31645 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SLC6A4P31645 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SLC6A4P31645 ANKRD36BP1-202ENST00000604892 1417 ntBASIC4.79□□□□□ -1.64
SLC6A4P31645 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
SLC6A4P31645 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SLC6A4P31645 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.79□□□□□ -1.64
SLC6A4P31645 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SLC6A4P31645 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.78□□□□□ -1.64
SLC6A4P31645 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SLC6A4P31645 ZNF137P-201ENST00000456718 1920 ntBASIC4.78□□□□□ -1.64
SLC6A4P31645 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SLC6A4P31645 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SLC6A4P31645 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.78□□□□□ -1.64
SLC6A4P31645 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
SLC6A4P31645 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SLC6A4P31645 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
SLC6A4P31645 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SLC6A4P31645 Y_RNA.97-201ENST00000363094 102 ntBASIC4.78□□□□□ -1.64
SLC6A4P31645 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SLC6A4P31645 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SLC6A4P31645 MIR659-201ENST00000384963 97 ntBASIC4.78□□□□□ -1.64
SLC6A4P31645 MIR320C1-201ENST00000408566 88 ntBASIC4.78□□□□□ -1.64
SLC6A4P31645 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.78□□□□□ -1.64
SLC6A4P31645 AC009302.1-201ENST00000417147 390 ntBASIC4.78□□□□□ -1.64
SLC6A4P31645 USP9YP13-201ENST00000417797 480 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms