Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.38□□□□□ -1.55
CNGA1P29973 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
CNGA1P29973 AC022893.2-201ENST00000564832 3296 ntBASIC5.38□□□□□ -1.55
CNGA1P29973 EIF2AP4-201ENST00000424793 1781 ntBASIC5.38□□□□□ -1.55
CNGA1P29973 AC100778.3-201ENST00000580060 1750 ntBASIC5.38□□□□□ -1.55
CNGA1P29973 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CNGA1P29973 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CNGA1P29973 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC5.38□□□□□ -1.55
CNGA1P29973 HMGB1P11-201ENST00000413899 637 ntBASIC5.38□□□□□ -1.55
CNGA1P29973 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC5.38□□□□□ -1.55
CNGA1P29973 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC5.38□□□□□ -1.55
CNGA1P29973 AC104333.2-201ENST00000422630 192 ntBASIC5.38□□□□□ -1.55
CNGA1P29973 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC5.38□□□□□ -1.55
CNGA1P29973 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC5.38□□□□□ -1.55
CNGA1P29973 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC5.38□□□□□ -1.55
CNGA1P29973 MRPL48P1-201ENST00000445390 636 ntBASIC5.38□□□□□ -1.55
CNGA1P29973 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC5.38□□□□□ -1.55
CNGA1P29973 RN7SL517P-201ENST00000462240 305 ntBASIC5.38□□□□□ -1.55
CNGA1P29973 AL591473.1-201ENST00000464297 313 ntBASIC5.38□□□□□ -1.55
CNGA1P29973 AC022034.3-201ENST00000471393 478 ntBASIC5.38□□□□□ -1.55
CNGA1P29973 AC068724.1-201ENST00000487100 792 ntBASIC5.38□□□□□ -1.55
CNGA1P29973 AC010424.1-201ENST00000506336 297 ntBASIC5.38□□□□□ -1.55
CNGA1P29973 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC5.38□□□□□ -1.55
CNGA1P29973 MTCO1P35-201ENST00000515270 228 ntBASIC5.38□□□□□ -1.55
CNGA1P29973 COX6CP8-201ENST00000522620 226 ntBASIC5.38□□□□□ -1.55
CNGA1P29973 AC068587.4-201ENST00000533893 186 ntBASIC5.38□□□□□ -1.55
CNGA1P29973 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CNGA1P29973 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.38□□□□□ -1.55
CNGA1P29973 AC068831.4-201ENST00000556118 109 ntBASIC5.38□□□□□ -1.55
CNGA1P29973 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC5.38□□□□□ -1.55
CNGA1P29973 AC012414.6-201ENST00000568241 401 ntBASIC5.38□□□□□ -1.55
CNGA1P29973 AC090312.1-201ENST00000580637 348 ntBASIC5.38□□□□□ -1.55
CNGA1P29973 SNORA74C-1-201ENST00000580726 201 ntBASIC5.38□□□□□ -1.55
CNGA1P29973 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC5.38□□□□□ -1.55
CNGA1P29973 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC5.38□□□□□ -1.55
CNGA1P29973 RSL24D1P11-201ENST00000591045 491 ntBASIC5.38□□□□□ -1.55
CNGA1P29973 ARF4P1-201ENST00000605447 541 ntBASIC5.38□□□□□ -1.55
CNGA1P29973 AL357080.1-201ENST00000617394 239 ntBASIC5.38□□□□□ -1.55
CNGA1P29973 MIR4496-201ENST00000635896 61 ntBASIC5.38□□□□□ -1.55
CNGA1P29973 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.38□□□□□ -1.55
CNGA1P29973 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CNGA1P29973 Z95327.2-201ENST00000414579 1873 ntBASIC5.38□□□□□ -1.55
CNGA1P29973 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CNGA1P29973 BTBD10P1-201ENST00000549824 1352 ntBASIC5.38□□□□□ -1.55
CNGA1P29973 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.38□□□□□ -1.55
CNGA1P29973 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC5.38□□□□□ -1.55
CNGA1P29973 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC5.38□□□□□ -1.55
CNGA1P29973 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
CNGA1P29973 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CNGA1P29973 AC104118.1-201ENST00000607625 1589 ntBASIC5.38□□□□□ -1.55
CNGA1P29973 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.38□□□□□ -1.55
CNGA1P29973 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
CNGA1P29973 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC5.37□□□□□ -1.55
CNGA1P29973 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CNGA1P29973 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CNGA1P29973 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
CNGA1P29973 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.37□□□□□ -1.55
CNGA1P29973 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CNGA1P29973 DDX18P3-201ENST00000404856 2007 ntBASIC5.37□□□□□ -1.55
CNGA1P29973 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CNGA1P29973 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC5.37□□□□□ -1.55
CNGA1P29973 SNORA48.7-201ENST00000391302 135 ntBASIC5.37□□□□□ -1.55
CNGA1P29973 OR6C69P-201ENST00000394268 893 ntBASIC5.37□□□□□ -1.55
CNGA1P29973 RPL31P1-201ENST00000398116 372 ntBASIC5.37□□□□□ -1.55
CNGA1P29973 RN7SKP266-201ENST00000410232 287 ntBASIC5.37□□□□□ -1.55
CNGA1P29973 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC5.37□□□□□ -1.55
CNGA1P29973 AL591848.1-201ENST00000413092 322 ntBASIC5.37□□□□□ -1.55
CNGA1P29973 ZNF736P2Y-201ENST00000416040 1279 ntBASIC5.37□□□□□ -1.55
CNGA1P29973 FNDC3CP-201ENST00000420795 1155 ntBASIC5.37□□□□□ -1.55
CNGA1P29973 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC5.37□□□□□ -1.55
CNGA1P29973 RPS27AP12-201ENST00000429552 465 ntBASIC5.37□□□□□ -1.55
CNGA1P29973 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC5.37□□□□□ -1.55
CNGA1P29973 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC5.37□□□□□ -1.55
CNGA1P29973 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC5.37□□□□□ -1.55
CNGA1P29973 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC5.37□□□□□ -1.55
CNGA1P29973 RPS17P8-201ENST00000434525 335 ntBASIC5.37□□□□□ -1.55
CNGA1P29973 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.37□□□□□ -1.55
CNGA1P29973 AL450263.2-201ENST00000439400 589 ntBASIC5.37□□□□□ -1.55
CNGA1P29973 BMI1P1-201ENST00000445879 941 ntBASIC5.37□□□□□ -1.55
CNGA1P29973 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC5.37□□□□□ -1.55
CNGA1P29973 CYCSP34-201ENST00000458172 304 ntBASIC5.37□□□□□ -1.55
CNGA1P29973 UBTFL6-201ENST00000477929 1024 ntBASIC5.37□□□□□ -1.55
CNGA1P29973 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC5.37□□□□□ -1.55
CNGA1P29973 MTND4P2-201ENST00000507767 1203 ntBASIC5.37□□□□□ -1.55
CNGA1P29973 PGBD4P4-201ENST00000509673 613 ntBASIC5.37□□□□□ -1.55
CNGA1P29973 AC091965.2-201ENST00000512324 613 ntBASIC5.37□□□□□ -1.55
CNGA1P29973 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.37□□□□□ -1.55
CNGA1P29973 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC5.37□□□□□ -1.55
CNGA1P29973 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC5.37□□□□□ -1.55
CNGA1P29973 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC5.37□□□□□ -1.55
CNGA1P29973 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC5.37□□□□□ -1.55
CNGA1P29973 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC5.37□□□□□ -1.55
CNGA1P29973 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC5.37□□□□□ -1.55
CNGA1P29973 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC5.37□□□□□ -1.55
CNGA1P29973 AC103987.3-201ENST00000582071 292 ntBASIC5.37□□□□□ -1.55
CNGA1P29973 OR4G1P-201ENST00000588632 938 ntBASIC5.37□□□□□ -1.55
CNGA1P29973 AC025588.3-201ENST00000604182 274 ntBASIC5.37□□□□□ -1.55
CNGA1P29973 AC012557.2-201ENST00000605919 418 ntBASIC5.37□□□□□ -1.55
CNGA1P29973 AP003117.2-201ENST00000606010 545 ntBASIC5.37□□□□□ -1.55
CNGA1P29973 AC090116.1-201ENST00000615679 446 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms