Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 RSL24D1P1-201ENST00000404972 493 ntBASIC2.56□□□□□ -2
HLA-DMBP28068 AP000567.1-201ENST00000406413 156 ntBASIC2.56□□□□□ -2
HLA-DMBP28068 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC2.56□□□□□ -2
HLA-DMBP28068 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC2.56□□□□□ -2
HLA-DMBP28068 AC241520.1-201ENST00000422654 1099 ntBASIC2.56□□□□□ -2
HLA-DMBP28068 AL121578.1-201ENST00000428051 892 ntBASIC2.56□□□□□ -2
HLA-DMBP28068 RPL23AP22-201ENST00000437556 453 ntBASIC2.56□□□□□ -2
HLA-DMBP28068 FTH1P1-201ENST00000437933 532 ntBASIC2.56□□□□□ -2
HLA-DMBP28068 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC2.56□□□□□ -2
HLA-DMBP28068 AC092641.1-201ENST00000440229 772 ntBASIC2.56□□□□□ -2
HLA-DMBP28068 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC2.56□□□□□ -2
HLA-DMBP28068 PRDX3P3-201ENST00000447765 522 ntBASIC2.56□□□□□ -2
HLA-DMBP28068 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC2.56□□□□□ -2
HLA-DMBP28068 AC092754.2-201ENST00000463506 460 ntBASIC2.56□□□□□ -2
HLA-DMBP28068 RPL23AP67-201ENST00000465341 474 ntBASIC2.56□□□□□ -2
HLA-DMBP28068 AC114967.1-201ENST00000504890 259 ntBASIC2.56□□□□□ -2
HLA-DMBP28068 AC016550.3-201ENST00000515706 767 ntBASIC2.56□□□□□ -2
HLA-DMBP28068 RNU6-491P-201ENST00000516099 110 ntBASIC2.56□□□□□ -2
HLA-DMBP28068 AC068657.1-201ENST00000520807 306 ntBASIC2.56□□□□□ -2
HLA-DMBP28068 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC2.56□□□□□ -2
HLA-DMBP28068 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC2.56□□□□□ -2
HLA-DMBP28068 OR4V1P-201ENST00000525394 1140 ntBASIC2.56□□□□□ -2
HLA-DMBP28068 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC2.56□□□□□ -2
HLA-DMBP28068 NACA-211ENST00000548563 827 ntTSL 5 BASIC2.56□□□□□ -2
HLA-DMBP28068 AC010198.2-201ENST00000550612 259 ntBASIC2.56□□□□□ -2
HLA-DMBP28068 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC2.56□□□□□ -2
HLA-DMBP28068 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC2.56□□□□□ -2
HLA-DMBP28068 AC011468.4-201ENST00000603942 409 ntBASIC2.56□□□□□ -2
HLA-DMBP28068 ELOCP35-201ENST00000604289 336 ntBASIC2.56□□□□□ -2
HLA-DMBP28068 AC018754.1-201ENST00000607486 925 ntBASIC2.56□□□□□ -2
HLA-DMBP28068 AL159169.3-201ENST00000608871 561 ntBASIC2.56□□□□□ -2
HLA-DMBP28068 AC005156.1-201ENST00000613371 573 ntBASIC2.56□□□□□ -2
HLA-DMBP28068 AC110801.1-201ENST00000623590 212 ntBASIC2.56□□□□□ -2
HLA-DMBP28068 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.56□□□□□ -2
HLA-DMBP28068 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC2.56□□□□□ -2
HLA-DMBP28068 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC2.56□□□□□ -2
HLA-DMBP28068 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
HLA-DMBP28068 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC2.55□□□□□ -2
HLA-DMBP28068 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
HLA-DMBP28068 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC2.55□□□□□ -2
HLA-DMBP28068 MIR208A-201ENST00000362287 71 ntBASIC2.55□□□□□ -2
HLA-DMBP28068 Y_RNA.333-201ENST00000365274 102 ntBASIC2.55□□□□□ -2
HLA-DMBP28068 MIR183-201ENST00000384958 110 ntBASIC2.55□□□□□ -2
HLA-DMBP28068 DNAJC19P6-201ENST00000401853 280 ntBASIC2.55□□□□□ -2
HLA-DMBP28068 SNORA11.1-201ENST00000408133 129 ntBASIC2.55□□□□□ -2
HLA-DMBP28068 RNA5SP31-201ENST00000411144 127 ntBASIC2.55□□□□□ -2
HLA-DMBP28068 RNU2-6P-201ENST00000411404 190 ntBASIC2.55□□□□□ -2
HLA-DMBP28068 AC234782.4-201ENST00000417646 1048 ntBASIC2.55□□□□□ -2
HLA-DMBP28068 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC2.55□□□□□ -2
HLA-DMBP28068 DPPA2P1-201ENST00000428060 556 ntBASIC2.55□□□□□ -2
HLA-DMBP28068 CYCSP4-201ENST00000429682 331 ntBASIC2.55□□□□□ -2
HLA-DMBP28068 ATP5JP1-201ENST00000431631 322 ntBASIC2.55□□□□□ -2
HLA-DMBP28068 AL035458.1-201ENST00000433096 585 ntBASIC2.55□□□□□ -2
HLA-DMBP28068 HMGB1P45-201ENST00000435986 653 ntBASIC2.55□□□□□ -2
HLA-DMBP28068 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC2.55□□□□□ -2
HLA-DMBP28068 AC009969.1-201ENST00000438726 172 ntBASIC2.55□□□□□ -2
HLA-DMBP28068 RPL23AP33-201ENST00000442301 452 ntBASIC2.55□□□□□ -2
HLA-DMBP28068 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC2.55□□□□□ -2
HLA-DMBP28068 AC091179.1-201ENST00000461606 579 ntBASIC2.55□□□□□ -2
HLA-DMBP28068 PLGLA-201ENST00000465668 449 ntBASIC2.55□□□□□ -2
HLA-DMBP28068 AC021205.2-201ENST00000480069 347 ntBASIC2.55□□□□□ -2
HLA-DMBP28068 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
HLA-DMBP28068 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC2.55□□□□□ -2
HLA-DMBP28068 PANCR-201ENST00000503456 493 ntTSL 5 BASIC2.55□□□□□ -2
HLA-DMBP28068 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC2.55□□□□□ -2
HLA-DMBP28068 PCNAP1-201ENST00000505363 709 ntBASIC2.55□□□□□ -2
HLA-DMBP28068 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC2.55□□□□□ -2
HLA-DMBP28068 AC147055.1-201ENST00000509261 750 ntBASIC2.55□□□□□ -2
HLA-DMBP28068 AC005351.1-201ENST00000511152 786 ntBASIC2.55□□□□□ -2
HLA-DMBP28068 AC093755.1-201ENST00000512950 1023 ntBASIC2.55□□□□□ -2
HLA-DMBP28068 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC2.55□□□□□ -2
HLA-DMBP28068 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC2.55□□□□□ -2
HLA-DMBP28068 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.55□□□□□ -2
HLA-DMBP28068 OR6C73P-201ENST00000546432 358 ntBASIC2.55□□□□□ -2
HLA-DMBP28068 AC005476.1-201ENST00000554427 397 ntBASIC2.55□□□□□ -2
HLA-DMBP28068 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC2.55□□□□□ -2
HLA-DMBP28068 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.55□□□□□ -2
HLA-DMBP28068 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.55□□□□□ -2
HLA-DMBP28068 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC2.55□□□□□ -2
HLA-DMBP28068 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC2.55□□□□□ -2
HLA-DMBP28068 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.55□□□□□ -2
HLA-DMBP28068 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.55□□□□□ -2
HLA-DMBP28068 AL391597.1-201ENST00000618707 694 ntBASIC2.55□□□□□ -2
HLA-DMBP28068 U6.105-201ENST00000637379 88 ntBASIC2.55□□□□□ -2
HLA-DMBP28068 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
HLA-DMBP28068 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC2.54□□□□□ -2
HLA-DMBP28068 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC2.54□□□□□ -2
HLA-DMBP28068 MTCO1P24-201ENST00000515438 1558 ntBASIC2.54□□□□□ -2
HLA-DMBP28068 DDX6P1-205ENST00000441966 1436 ntBASIC2.54□□□□□ -2
HLA-DMBP28068 GTF2H2B-203ENST00000508065 1432 ntBASIC2.54□□□□□ -2
HLA-DMBP28068 RNU4-35P-201ENST00000362588 141 ntBASIC2.54□□□□□ -2
HLA-DMBP28068 DYNLT3P1-201ENST00000378574 347 ntBASIC2.54□□□□□ -2
HLA-DMBP28068 MIR607-201ENST00000385241 96 ntBASIC2.54□□□□□ -2
HLA-DMBP28068 SNORD17-201ENST00000390930 237 ntBASIC2.54□□□□□ -2
HLA-DMBP28068 AL583834.1-201ENST00000406943 343 ntBASIC2.54□□□□□ -2
HLA-DMBP28068 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
HLA-DMBP28068 XKRYP4-201ENST00000414395 483 ntBASIC2.54□□□□□ -2
HLA-DMBP28068 NDUFB4P5-201ENST00000415445 361 ntBASIC2.54□□□□□ -2
HLA-DMBP28068 RPS7P15-201ENST00000415804 584 ntBASIC2.54□□□□□ -2
HLA-DMBP28068 AL356806.1-201ENST00000422524 916 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms