Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 MIR7702-201ENST00000621931 59 ntBASIC3.97□□□□□ -1.77
CDH3P22223 AL157770.1-201ENST00000623049 439 ntBASIC3.97□□□□□ -1.77
CDH3P22223 AP000770.2-201ENST00000623694 100 ntBASIC3.97□□□□□ -1.77
CDH3P22223 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.97□□□□□ -1.77
CDH3P22223 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.97□□□□□ -1.77
CDH3P22223 GABPAP-201ENST00000419271 1356 ntBASIC3.97□□□□□ -1.77
CDH3P22223 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CDH3P22223 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
CDH3P22223 AP005901.5-201ENST00000545779 1796 ntBASIC3.97□□□□□ -1.77
CDH3P22223 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.77
CDH3P22223 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
CDH3P22223 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CDH3P22223 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CDH3P22223 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
CDH3P22223 SNORA60-201ENST00000362396 134 ntBASIC3.96□□□□□ -1.78
CDH3P22223 RNU6-839P-201ENST00000363347 108 ntBASIC3.96□□□□□ -1.78
CDH3P22223 RNA5SP391-201ENST00000363456 119 ntBASIC3.96□□□□□ -1.78
CDH3P22223 RNA5SP283-201ENST00000365604 119 ntBASIC3.96□□□□□ -1.78
CDH3P22223 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.96□□□□□ -1.78
CDH3P22223 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.96□□□□□ -1.78
CDH3P22223 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
CDH3P22223 RNU6-636P-201ENST00000384598 107 ntBASIC3.96□□□□□ -1.78
CDH3P22223 MIR217-201ENST00000384817 110 ntBASIC3.96□□□□□ -1.78
CDH3P22223 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.96□□□□□ -1.78
CDH3P22223 HSPE1P12-201ENST00000412576 301 ntBASIC3.96□□□□□ -1.78
CDH3P22223 OR8G2P-201ENST00000412796 908 ntBASIC3.96□□□□□ -1.78
CDH3P22223 OR5BE1P-201ENST00000425977 939 ntBASIC3.96□□□□□ -1.78
CDH3P22223 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.96□□□□□ -1.78
CDH3P22223 MTCO1P3-201ENST00000429327 192 ntBASIC3.96□□□□□ -1.78
CDH3P22223 AL356276.2-201ENST00000435919 558 ntBASIC3.96□□□□□ -1.78
CDH3P22223 GTF2IP7-202ENST00000436677 309 ntBASIC3.96□□□□□ -1.78
CDH3P22223 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.96□□□□□ -1.78
CDH3P22223 CR769776.1-201ENST00000441254 787 ntBASIC3.96□□□□□ -1.78
CDH3P22223 RPS4XP4-201ENST00000443195 763 ntBASIC3.96□□□□□ -1.78
CDH3P22223 ELOCP13-201ENST00000443934 329 ntBASIC3.96□□□□□ -1.78
CDH3P22223 RPL7P59-201ENST00000447700 943 ntBASIC3.96□□□□□ -1.78
CDH3P22223 AC004022.1-201ENST00000447766 1066 ntBASIC3.96□□□□□ -1.78
CDH3P22223 RPS15AP1-201ENST00000457423 391 ntBASIC3.96□□□□□ -1.78
CDH3P22223 RPL36AP13-201ENST00000457490 317 ntBASIC3.96□□□□□ -1.78
CDH3P22223 DYNLL1P6-201ENST00000503440 264 ntBASIC3.96□□□□□ -1.78
CDH3P22223 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.96□□□□□ -1.78
CDH3P22223 AC090071.1-201ENST00000507713 644 ntBASIC3.96□□□□□ -1.78
CDH3P22223 AC113347.3-201ENST00000509113 148 ntBASIC3.96□□□□□ -1.78
CDH3P22223 AC048346.1-201ENST00000510247 144 ntBASIC3.96□□□□□ -1.78
CDH3P22223 Y_RNA.717-201ENST00000517106 92 ntBASIC3.96□□□□□ -1.78
CDH3P22223 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.96□□□□□ -1.78
CDH3P22223 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.96□□□□□ -1.78
CDH3P22223 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.96□□□□□ -1.78
CDH3P22223 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CDH3P22223 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.96□□□□□ -1.78
CDH3P22223 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.96□□□□□ -1.78
CDH3P22223 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.96□□□□□ -1.78
CDH3P22223 BNIP3P5-201ENST00000562290 498 ntBASIC3.96□□□□□ -1.78
CDH3P22223 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.96□□□□□ -1.78
CDH3P22223 ZNF192P1-203ENST00000565888 810 ntBASIC3.96□□□□□ -1.78
CDH3P22223 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.96□□□□□ -1.78
CDH3P22223 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.96□□□□□ -1.78
CDH3P22223 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.96□□□□□ -1.78
CDH3P22223 AC234772.3-201ENST00000602277 528 ntBASIC3.96□□□□□ -1.78
CDH3P22223 AL451044.1-201ENST00000604867 238 ntBASIC3.96□□□□□ -1.78
CDH3P22223 AC016877.3-201ENST00000606778 504 ntBASIC3.96□□□□□ -1.78
CDH3P22223 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.96□□□□□ -1.78
CDH3P22223 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CDH3P22223 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.96□□□□□ -1.78
CDH3P22223 AC090246.1-201ENST00000616499 426 ntBASIC3.96□□□□□ -1.78
CDH3P22223 AC121761.2-201ENST00000617300 689 ntBASIC3.96□□□□□ -1.78
CDH3P22223 AC008147.4-201ENST00000617570 1204 ntBASIC3.96□□□□□ -1.78
CDH3P22223 U7.8-201ENST00000619968 63 ntBASIC3.96□□□□□ -1.78
CDH3P22223 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC3.96□□□□□ -1.78
CDH3P22223 OR5BE1P-202ENST00000641168 1176 ntBASIC3.96□□□□□ -1.78
CDH3P22223 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.96□□□□□ -1.78
CDH3P22223 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CDH3P22223 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
CDH3P22223 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.96□□□□□ -1.78
CDH3P22223 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.96□□□□□ -1.78
CDH3P22223 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CDH3P22223 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CDH3P22223 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CDH3P22223 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.95□□□□□ -1.78
CDH3P22223 MTND5P3-201ENST00000438536 1800 ntBASIC3.95□□□□□ -1.78
CDH3P22223 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CDH3P22223 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CDH3P22223 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
CDH3P22223 TNPO1P3-201ENST00000436471 2662 ntBASIC3.95□□□□□ -1.78
CDH3P22223 SNORA31-201ENST00000362607 130 ntBASIC3.95□□□□□ -1.78
CDH3P22223 RNU4-92P-201ENST00000363783 136 ntBASIC3.95□□□□□ -1.78
CDH3P22223 RNU6-1293P-201ENST00000384077 107 ntBASIC3.95□□□□□ -1.78
CDH3P22223 PPIAP31-201ENST00000405422 495 ntBASIC3.95□□□□□ -1.78
CDH3P22223 TPT1P2-201ENST00000413105 503 ntBASIC3.95□□□□□ -1.78
CDH3P22223 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
CDH3P22223 AC009237.2-201ENST00000421358 284 ntBASIC3.95□□□□□ -1.78
CDH3P22223 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.95□□□□□ -1.78
CDH3P22223 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.95□□□□□ -1.78
CDH3P22223 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.95□□□□□ -1.78
CDH3P22223 YWHAZP8-201ENST00000436935 731 ntBASIC3.95□□□□□ -1.78
CDH3P22223 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.95□□□□□ -1.78
CDH3P22223 RPL29P29-201ENST00000448725 423 ntBASIC3.95□□□□□ -1.78
CDH3P22223 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC3.95□□□□□ -1.78
CDH3P22223 RPS20P21-201ENST00000466859 343 ntBASIC3.95□□□□□ -1.78
CDH3P22223 SNRPGP3-201ENST00000469405 227 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms