Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.09□□□□□ -1.6
ATF4P18848 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
ATF4P18848 TAB3P1-202ENST00000452645 1634 ntBASIC5.08□□□□□ -1.6
ATF4P18848 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
ATF4P18848 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
ATF4P18848 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
ATF4P18848 API5P2-201ENST00000397055 1498 ntBASIC5.08□□□□□ -1.6
ATF4P18848 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.08□□□□□ -1.6
ATF4P18848 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
ATF4P18848 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.08□□□□□ -1.6
ATF4P18848 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
ATF4P18848 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
ATF4P18848 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
ATF4P18848 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
ATF4P18848 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
ATF4P18848 RNU6-552P-201ENST00000362869 119 ntBASIC5.08□□□□□ -1.6
ATF4P18848 RNU6-1287P-201ENST00000362914 107 ntBASIC5.08□□□□□ -1.6
ATF4P18848 RN7SKP189-201ENST00000365042 330 ntBASIC5.08□□□□□ -1.6
ATF4P18848 SNORA70.3-201ENST00000365075 132 ntBASIC5.08□□□□□ -1.6
ATF4P18848 SNORA24.1-201ENST00000384401 135 ntBASIC5.08□□□□□ -1.6
ATF4P18848 RNU6-1060P-201ENST00000384664 107 ntBASIC5.08□□□□□ -1.6
ATF4P18848 MIR187-201ENST00000385062 109 ntBASIC5.08□□□□□ -1.6
ATF4P18848 SNORD94-201ENST00000386037 137 ntBASIC5.08□□□□□ -1.6
ATF4P18848 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
ATF4P18848 RNU6-903P-201ENST00000391270 109 ntBASIC5.08□□□□□ -1.6
ATF4P18848 AC026310.1-201ENST00000396004 378 ntBASIC5.08□□□□□ -1.6
ATF4P18848 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
ATF4P18848 RPL5P20-201ENST00000403848 896 ntBASIC5.08□□□□□ -1.6
ATF4P18848 RNA5SP487-201ENST00000410186 122 ntBASIC5.08□□□□□ -1.6
ATF4P18848 AC114491.1-201ENST00000416095 246 ntBASIC5.08□□□□□ -1.6
ATF4P18848 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.08□□□□□ -1.6
ATF4P18848 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC5.08□□□□□ -1.6
ATF4P18848 CYCSP52-201ENST00000422857 310 ntBASIC5.08□□□□□ -1.6
ATF4P18848 SRIP2-201ENST00000428470 166 ntBASIC5.08□□□□□ -1.6
ATF4P18848 CALM2P2-201ENST00000428512 440 ntBASIC5.08□□□□□ -1.6
ATF4P18848 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC5.08□□□□□ -1.6
ATF4P18848 RPL21P133-201ENST00000443666 476 ntBASIC5.08□□□□□ -1.6
ATF4P18848 PFN1P11-201ENST00000445829 389 ntBASIC5.08□□□□□ -1.6
ATF4P18848 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.08□□□□□ -1.6
ATF4P18848 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
ATF4P18848 RPL23AP28-201ENST00000448062 470 ntBASIC5.08□□□□□ -1.6
ATF4P18848 RPL23AP60-201ENST00000450011 454 ntBASIC5.08□□□□□ -1.6
ATF4P18848 HIGD1AP16-201ENST00000450986 258 ntBASIC5.08□□□□□ -1.6
ATF4P18848 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC5.08□□□□□ -1.6
ATF4P18848 MTND3P16-201ENST00000452205 344 ntBASIC5.08□□□□□ -1.6
ATF4P18848 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC5.08□□□□□ -1.6
ATF4P18848 AC108161.1-201ENST00000461060 402 ntBASIC5.08□□□□□ -1.6
ATF4P18848 RN7SL197P-201ENST00000466981 299 ntBASIC5.08□□□□□ -1.6
ATF4P18848 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC5.08□□□□□ -1.6
ATF4P18848 RN7SL790P-201ENST00000474043 298 ntBASIC5.08□□□□□ -1.6
ATF4P18848 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC5.08□□□□□ -1.6
ATF4P18848 AC091885.1-201ENST00000506658 268 ntBASIC5.08□□□□□ -1.6
ATF4P18848 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.08□□□□□ -1.6
ATF4P18848 AC004062.1-201ENST00000509926 645 ntBASIC5.08□□□□□ -1.6
ATF4P18848 GMPSP1-201ENST00000514075 579 ntBASIC5.08□□□□□ -1.6
ATF4P18848 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC5.08□□□□□ -1.6
ATF4P18848 AC022690.1-201ENST00000526681 550 ntBASIC5.08□□□□□ -1.6
ATF4P18848 OR5B19P-201ENST00000531766 928 ntBASIC5.08□□□□□ -1.6
ATF4P18848 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.08□□□□□ -1.6
ATF4P18848 AC140063.1-201ENST00000541343 259 ntBASIC5.08□□□□□ -1.6
ATF4P18848 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.08□□□□□ -1.6
ATF4P18848 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.08□□□□□ -1.6
ATF4P18848 AC007424.1-203ENST00000554613 687 ntBASIC5.08□□□□□ -1.6
ATF4P18848 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC5.08□□□□□ -1.6
ATF4P18848 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC5.08□□□□□ -1.6
ATF4P18848 AL138976.2-201ENST00000563989 694 ntBASIC5.08□□□□□ -1.6
ATF4P18848 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.08□□□□□ -1.6
ATF4P18848 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.08□□□□□ -1.6
ATF4P18848 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC5.08□□□□□ -1.6
ATF4P18848 AC233702.7-202ENST00000582941 211 ntBASIC5.08□□□□□ -1.6
ATF4P18848 AC005261.5-201ENST00000596280 355 ntBASIC5.08□□□□□ -1.6
ATF4P18848 AC013553.2-201ENST00000604244 589 ntBASIC5.08□□□□□ -1.6
ATF4P18848 AL590032.1-201ENST00000604920 252 ntBASIC5.08□□□□□ -1.6
ATF4P18848 AL365181.4-201ENST00000609800 547 ntBASIC5.08□□□□□ -1.6
ATF4P18848 AC024255.1-201ENST00000614376 102 ntBASIC5.08□□□□□ -1.6
ATF4P18848 AC015967.1-201ENST00000619893 476 ntBASIC5.08□□□□□ -1.6
ATF4P18848 AC010338.1-201ENST00000621823 717 ntBASIC5.08□□□□□ -1.6
ATF4P18848 AC007998.5-201ENST00000622938 237 ntBASIC5.08□□□□□ -1.6
ATF4P18848 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC5.08□□□□□ -1.6
ATF4P18848 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.08□□□□□ -1.6
ATF4P18848 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
ATF4P18848 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
ATF4P18848 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
ATF4P18848 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
ATF4P18848 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
ATF4P18848 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.08□□□□□ -1.6
ATF4P18848 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
ATF4P18848 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.08□□□□□ -1.6
ATF4P18848 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
ATF4P18848 AC092326.2-201ENST00000624772 1561 ntBASIC5.08□□□□□ -1.6
ATF4P18848 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
ATF4P18848 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC5.07□□□□□ -1.6
ATF4P18848 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
ATF4P18848 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
ATF4P18848 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
ATF4P18848 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.07□□□□□ -1.6
ATF4P18848 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.07□□□□□ -1.6
ATF4P18848 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC5.07□□□□□ -1.6
ATF4P18848 RNU6-76P-201ENST00000384060 104 ntBASIC5.07□□□□□ -1.6
ATF4P18848 RNA5SP176-201ENST00000390956 110 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 159.9 ms