Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC5.96□□□□□ -1.46
BMP3P12645 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC5.96□□□□□ -1.46
BMP3P12645 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.96□□□□□ -1.46
BMP3P12645 AC021646.1-201ENST00000605469 484 ntBASIC5.96□□□□□ -1.46
BMP3P12645 AC103710.3-201ENST00000608157 948 ntBASIC5.96□□□□□ -1.46
BMP3P12645 AP005432.2-201ENST00000608162 586 ntBASIC5.96□□□□□ -1.46
BMP3P12645 AC233309.1-201ENST00000619522 751 ntBASIC5.96□□□□□ -1.46
BMP3P12645 MIR6839-201ENST00000620425 113 ntBASIC5.96□□□□□ -1.46
BMP3P12645 AC090617.10-201ENST00000624308 134 ntBASIC5.96□□□□□ -1.46
BMP3P12645 AC119674.1-207ENST00000641355 633 ntBASIC5.96□□□□□ -1.46
BMP3P12645 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.96□□□□□ -1.46
BMP3P12645 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
BMP3P12645 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
BMP3P12645 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
BMP3P12645 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.96□□□□□ -1.46
BMP3P12645 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
BMP3P12645 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.95□□□□□ -1.46
BMP3P12645 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
BMP3P12645 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
BMP3P12645 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
BMP3P12645 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC5.95□□□□□ -1.46
BMP3P12645 AC068870.3-201ENST00000625077 2536 ntBASIC5.95□□□□□ -1.46
BMP3P12645 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
BMP3P12645 MTND4P35-201ENST00000604257 1375 ntBASIC5.95□□□□□ -1.46
BMP3P12645 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.95□□□□□ -1.46
BMP3P12645 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
BMP3P12645 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
BMP3P12645 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.95□□□□□ -1.46
BMP3P12645 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.95□□□□□ -1.46
BMP3P12645 RNU6-1309P-201ENST00000363305 108 ntBASIC5.95□□□□□ -1.46
BMP3P12645 RN7SKP103-201ENST00000363848 320 ntBASIC5.95□□□□□ -1.46
BMP3P12645 RNU6-639P-201ENST00000384074 107 ntBASIC5.95□□□□□ -1.46
BMP3P12645 RNU6-1158P-201ENST00000391167 107 ntBASIC5.95□□□□□ -1.46
BMP3P12645 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
BMP3P12645 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC5.95□□□□□ -1.46
BMP3P12645 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
BMP3P12645 SETP9-201ENST00000423837 832 ntBASIC5.95□□□□□ -1.46
BMP3P12645 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC5.95□□□□□ -1.46
BMP3P12645 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.95□□□□□ -1.46
BMP3P12645 BX276092.6-201ENST00000430476 250 ntBASIC5.95□□□□□ -1.46
BMP3P12645 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.95□□□□□ -1.46
BMP3P12645 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.95□□□□□ -1.46
BMP3P12645 BX276092.8-201ENST00000455722 250 ntBASIC5.95□□□□□ -1.46
BMP3P12645 AC027575.1-201ENST00000481064 460 ntBASIC5.95□□□□□ -1.46
BMP3P12645 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC5.95□□□□□ -1.46
BMP3P12645 RPS27P23-201ENST00000487608 251 ntBASIC5.95□□□□□ -1.46
BMP3P12645 COX6B1P5-201ENST00000509843 249 ntBASIC5.95□□□□□ -1.46
BMP3P12645 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
BMP3P12645 SNORA40.12-201ENST00000516329 111 ntBASIC5.95□□□□□ -1.46
BMP3P12645 RNU6-1003P-201ENST00000517099 105 ntBASIC5.95□□□□□ -1.46
BMP3P12645 LY96-202ENST00000518893 430 ntTSL 3 BASIC5.95□□□□□ -1.46
BMP3P12645 BTF3P12-201ENST00000519620 469 ntBASIC5.95□□□□□ -1.46
BMP3P12645 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.95□□□□□ -1.46
BMP3P12645 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.95□□□□□ -1.46
BMP3P12645 PDCD5P1-201ENST00000543528 309 ntBASIC5.95□□□□□ -1.46
BMP3P12645 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC5.95□□□□□ -1.46
BMP3P12645 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.95□□□□□ -1.46
BMP3P12645 MIR3934-201ENST00000579806 107 ntBASIC5.95□□□□□ -1.46
BMP3P12645 MIR4742-201ENST00000581069 85 ntBASIC5.95□□□□□ -1.46
BMP3P12645 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.95□□□□□ -1.46
BMP3P12645 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC5.95□□□□□ -1.46
BMP3P12645 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.95□□□□□ -1.46
BMP3P12645 AC008966.2-201ENST00000606157 453 ntBASIC5.95□□□□□ -1.46
BMP3P12645 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC5.95□□□□□ -1.46
BMP3P12645 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC5.95□□□□□ -1.46
BMP3P12645 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC5.95□□□□□ -1.46
BMP3P12645 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.95□□□□□ -1.46
BMP3P12645 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC5.95□□□□□ -1.46
BMP3P12645 AC026634.1-201ENST00000634369 198 ntBASIC5.95□□□□□ -1.46
BMP3P12645 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC5.95□□□□□ -1.46
BMP3P12645 SCARNA15-201ENST00000607520 4325 ntBASIC5.95□□□□□ -1.46
BMP3P12645 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
BMP3P12645 AC007996.1-201ENST00000620414 2821 ntBASIC5.95□□□□□ -1.46
BMP3P12645 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
BMP3P12645 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
BMP3P12645 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
BMP3P12645 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
BMP3P12645 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
BMP3P12645 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
BMP3P12645 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
BMP3P12645 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
BMP3P12645 ZNF402P-201ENST00000404435 3100 ntBASIC5.94□□□□□ -1.46
BMP3P12645 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.94□□□□□ -1.46
BMP3P12645 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
BMP3P12645 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
BMP3P12645 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
BMP3P12645 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
BMP3P12645 SNRPEP3-201ENST00000338402 276 ntBASIC5.94□□□□□ -1.46
BMP3P12645 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
BMP3P12645 RNU6-223P-201ENST00000362830 107 ntBASIC5.94□□□□□ -1.46
BMP3P12645 RN7SKP95-201ENST00000362860 303 ntBASIC5.94□□□□□ -1.46
BMP3P12645 RNA5SP428-201ENST00000365129 132 ntBASIC5.94□□□□□ -1.46
BMP3P12645 RNU6-784P-201ENST00000384330 106 ntBASIC5.94□□□□□ -1.46
BMP3P12645 MIR506-201ENST00000384998 124 ntBASIC5.94□□□□□ -1.46
BMP3P12645 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
BMP3P12645 RN7SKP266-201ENST00000410232 287 ntBASIC5.94□□□□□ -1.46
BMP3P12645 RNA5SP498-201ENST00000411342 120 ntBASIC5.94□□□□□ -1.46
BMP3P12645 AC073264.1-201ENST00000411508 416 ntBASIC5.94□□□□□ -1.46
BMP3P12645 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC5.94□□□□□ -1.46
BMP3P12645 AC113618.1-201ENST00000416747 285 ntBASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms