Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 NPM1P10-201ENST00000398310 865 ntBASIC3.97□□□□□ -1.77
TOP1P11387 RNU6-55P-201ENST00000411092 107 ntBASIC3.97□□□□□ -1.77
TOP1P11387 RNU6-954P-201ENST00000411355 107 ntBASIC3.97□□□□□ -1.77
TOP1P11387 ZNF92P1Y-201ENST00000415010 1191 ntBASIC3.97□□□□□ -1.77
TOP1P11387 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.97□□□□□ -1.77
TOP1P11387 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.97□□□□□ -1.77
TOP1P11387 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC3.97□□□□□ -1.77
TOP1P11387 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.97□□□□□ -1.77
TOP1P11387 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
TOP1P11387 HMGB1P45-201ENST00000435986 653 ntBASIC3.97□□□□□ -1.77
TOP1P11387 AC006994.1-201ENST00000438212 839 ntBASIC3.97□□□□□ -1.77
TOP1P11387 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.97□□□□□ -1.77
TOP1P11387 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC3.97□□□□□ -1.77
TOP1P11387 CFTRP1-201ENST00000456646 183 ntBASIC3.97□□□□□ -1.77
TOP1P11387 RN7SL601P-201ENST00000471221 293 ntBASIC3.97□□□□□ -1.77
TOP1P11387 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.97□□□□□ -1.77
TOP1P11387 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC3.97□□□□□ -1.77
TOP1P11387 RPL7P47-201ENST00000497299 556 ntBASIC3.97□□□□□ -1.77
TOP1P11387 AL035404.1-201ENST00000497982 568 ntBASIC3.97□□□□□ -1.77
TOP1P11387 AC020893.1-201ENST00000502452 580 ntBASIC3.97□□□□□ -1.77
TOP1P11387 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC3.97□□□□□ -1.77
TOP1P11387 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.97□□□□□ -1.77
TOP1P11387 RN7SKP283-201ENST00000517197 270 ntBASIC3.97□□□□□ -1.77
TOP1P11387 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.97□□□□□ -1.77
TOP1P11387 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.97□□□□□ -1.77
TOP1P11387 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.97□□□□□ -1.77
TOP1P11387 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.97□□□□□ -1.77
TOP1P11387 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.97□□□□□ -1.77
TOP1P11387 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.97□□□□□ -1.77
TOP1P11387 AC100814.1-201ENST00000606963 623 ntBASIC3.97□□□□□ -1.77
TOP1P11387 AC096577.2-201ENST00000611455 153 ntBASIC3.97□□□□□ -1.77
TOP1P11387 AC009032.1-201ENST00000617574 431 ntBASIC3.97□□□□□ -1.77
TOP1P11387 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.97□□□□□ -1.77
TOP1P11387 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.97□□□□□ -1.77
TOP1P11387 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.97□□□□□ -1.77
TOP1P11387 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
TOP1P11387 MTND5P1-201ENST00000445440 1375 ntBASIC3.97□□□□□ -1.77
TOP1P11387 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
TOP1P11387 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
TOP1P11387 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
TOP1P11387 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
TOP1P11387 MIR30E-201ENST00000362104 92 ntBASIC3.96□□□□□ -1.78
TOP1P11387 RNA5SP197-201ENST00000363357 119 ntBASIC3.96□□□□□ -1.78
TOP1P11387 RNA5SP387-201ENST00000364226 106 ntBASIC3.96□□□□□ -1.78
TOP1P11387 AC083799.1-201ENST00000366451 910 ntBASIC3.96□□□□□ -1.78
TOP1P11387 AP002088.1-201ENST00000382740 395 ntBASIC3.96□□□□□ -1.78
TOP1P11387 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.96□□□□□ -1.78
TOP1P11387 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.96□□□□□ -1.78
TOP1P11387 RPL31P2-201ENST00000413849 377 ntBASIC3.96□□□□□ -1.78
TOP1P11387 Z99755.1-201ENST00000414048 380 ntBASIC3.96□□□□□ -1.78
TOP1P11387 LIPT1P1-201ENST00000415870 1186 ntBASIC3.96□□□□□ -1.78
TOP1P11387 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
TOP1P11387 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.96□□□□□ -1.78
TOP1P11387 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.96□□□□□ -1.78
TOP1P11387 RPF2P1-201ENST00000424137 906 ntBASIC3.96□□□□□ -1.78
TOP1P11387 AC005300.1-201ENST00000428401 373 ntBASIC3.96□□□□□ -1.78
TOP1P11387 AC005326.1-201ENST00000429197 123 ntBASIC3.96□□□□□ -1.78
TOP1P11387 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.96□□□□□ -1.78
TOP1P11387 AC006539.3-201ENST00000454258 129 ntBASIC3.96□□□□□ -1.78
TOP1P11387 AC010401.1-201ENST00000463867 348 ntBASIC3.96□□□□□ -1.78
TOP1P11387 RPL23AP14-201ENST00000468281 468 ntBASIC3.96□□□□□ -1.78
TOP1P11387 RPL32P34-201ENST00000486380 400 ntBASIC3.96□□□□□ -1.78
TOP1P11387 AC112198.1-201ENST00000505369 1220 ntBASIC3.96□□□□□ -1.78
TOP1P11387 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.96□□□□□ -1.78
TOP1P11387 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.96□□□□□ -1.78
TOP1P11387 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.96□□□□□ -1.78
TOP1P11387 AL031985.2-201ENST00000600955 480 ntBASIC3.96□□□□□ -1.78
TOP1P11387 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.96□□□□□ -1.78
TOP1P11387 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC3.96□□□□□ -1.78
TOP1P11387 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
TOP1P11387 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
TOP1P11387 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.95□□□□□ -1.78
TOP1P11387 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.95□□□□□ -1.78
TOP1P11387 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
TOP1P11387 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
TOP1P11387 SNORA27.3-201ENST00000364937 134 ntBASIC3.95□□□□□ -1.78
TOP1P11387 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
TOP1P11387 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
TOP1P11387 MIR142-201ENST00000384835 87 ntBASIC3.95□□□□□ -1.78
TOP1P11387 MIR607-201ENST00000385241 96 ntBASIC3.95□□□□□ -1.78
TOP1P11387 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
TOP1P11387 RNU6-328P-201ENST00000390887 106 ntBASIC3.95□□□□□ -1.78
TOP1P11387 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
TOP1P11387 HMGB3P18-201ENST00000406327 590 ntBASIC3.95□□□□□ -1.78
TOP1P11387 MIR1303-201ENST00000408625 86 ntBASIC3.95□□□□□ -1.78
TOP1P11387 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC3.95□□□□□ -1.78
TOP1P11387 AC244098.2-201ENST00000422068 99 ntBASIC3.95□□□□□ -1.78
TOP1P11387 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.95□□□□□ -1.78
TOP1P11387 OR51AB1P-201ENST00000429046 620 ntBASIC3.95□□□□□ -1.78
TOP1P11387 RPL21P112-201ENST00000434403 463 ntBASIC3.95□□□□□ -1.78
TOP1P11387 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
TOP1P11387 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.95□□□□□ -1.78
TOP1P11387 Z77249.1-201ENST00000444622 1175 ntBASIC3.95□□□□□ -1.78
TOP1P11387 AC092685.1-201ENST00000447960 1243 ntBASIC3.95□□□□□ -1.78
TOP1P11387 CYCSP20-201ENST00000473154 315 ntBASIC3.95□□□□□ -1.78
TOP1P11387 AC126121.1-201ENST00000482313 553 ntBASIC3.95□□□□□ -1.78
TOP1P11387 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.95□□□□□ -1.78
TOP1P11387 SNORA31.13-201ENST00000516624 135 ntBASIC3.95□□□□□ -1.78
TOP1P11387 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.95□□□□□ -1.78
TOP1P11387 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms