Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 LSM6P2-201ENST00000552208 177 ntBASIC7□□□□□ -1.29
CSB-PGBD3P0DP91 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC7□□□□□ -1.29
CSB-PGBD3P0DP91 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC7□□□□□ -1.29
CSB-PGBD3P0DP91 MIR4270-201ENST00000581799 70 ntBASIC7□□□□□ -1.29
CSB-PGBD3P0DP91 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC7□□□□□ -1.29
CSB-PGBD3P0DP91 TPMTP1-201ENST00000592307 737 ntBASIC7□□□□□ -1.29
CSB-PGBD3P0DP91 AC007687.1-201ENST00000602704 304 ntBASIC7□□□□□ -1.29
CSB-PGBD3P0DP91 AC008745.1-201ENST00000604064 271 ntBASIC7□□□□□ -1.29
CSB-PGBD3P0DP91 AC124303.1-201ENST00000605703 360 ntBASIC7□□□□□ -1.29
CSB-PGBD3P0DP91 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC7□□□□□ -1.29
CSB-PGBD3P0DP91 AC105429.2-201ENST00000610567 517 ntBASIC7□□□□□ -1.29
CSB-PGBD3P0DP91 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC7□□□□□ -1.29
CSB-PGBD3P0DP91 AP000346.3-201ENST00000622821 210 ntBASIC7□□□□□ -1.29
CSB-PGBD3P0DP91 AC135068.12-201ENST00000637370 931 ntBASIC7□□□□□ -1.29
CSB-PGBD3P0DP91 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC7□□□□□ -1.29
CSB-PGBD3P0DP91 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CSB-PGBD3P0DP91 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC7□□□□□ -1.29
CSB-PGBD3P0DP91 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
CSB-PGBD3P0DP91 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CSB-PGBD3P0DP91 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CSB-PGBD3P0DP91 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CSB-PGBD3P0DP91 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC7□□□□□ -1.29
CSB-PGBD3P0DP91 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
CSB-PGBD3P0DP91 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC7□□□□□ -1.29
CSB-PGBD3P0DP91 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CSB-PGBD3P0DP91 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
CSB-PGBD3P0DP91 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.99□□□□□ -1.29
CSB-PGBD3P0DP91 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
CSB-PGBD3P0DP91 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CSB-PGBD3P0DP91 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.99□□□□□ -1.29
CSB-PGBD3P0DP91 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC6.99□□□□□ -1.29
CSB-PGBD3P0DP91 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.99□□□□□ -1.29
CSB-PGBD3P0DP91 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
CSB-PGBD3P0DP91 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CSB-PGBD3P0DP91 RPL23AP57-201ENST00000332361 466 ntBASIC6.99□□□□□ -1.29
CSB-PGBD3P0DP91 RNU6-451P-201ENST00000362921 107 ntBASIC6.99□□□□□ -1.29
CSB-PGBD3P0DP91 TPMTP2-201ENST00000414372 726 ntBASIC6.99□□□□□ -1.29
CSB-PGBD3P0DP91 RPL6P29-201ENST00000414863 865 ntBASIC6.99□□□□□ -1.29
CSB-PGBD3P0DP91 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC6.99□□□□□ -1.29
CSB-PGBD3P0DP91 AL353193.1-201ENST00000421444 268 ntBASIC6.99□□□□□ -1.29
CSB-PGBD3P0DP91 AL353678.1-201ENST00000422735 741 ntBASIC6.99□□□□□ -1.29
CSB-PGBD3P0DP91 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC6.99□□□□□ -1.29
CSB-PGBD3P0DP91 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC6.99□□□□□ -1.29
CSB-PGBD3P0DP91 AP000797.2-201ENST00000475768 606 ntBASIC6.99□□□□□ -1.29
CSB-PGBD3P0DP91 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC6.99□□□□□ -1.29
CSB-PGBD3P0DP91 AC007182.2-201ENST00000489251 402 ntBASIC6.99□□□□□ -1.29
CSB-PGBD3P0DP91 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC6.99□□□□□ -1.29
CSB-PGBD3P0DP91 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CSB-PGBD3P0DP91 AC034159.1-201ENST00000513885 583 ntBASIC6.99□□□□□ -1.29
CSB-PGBD3P0DP91 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.99□□□□□ -1.29
CSB-PGBD3P0DP91 RPS27AP18-201ENST00000515536 459 ntBASIC6.99□□□□□ -1.29
CSB-PGBD3P0DP91 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.99□□□□□ -1.29
CSB-PGBD3P0DP91 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC6.99□□□□□ -1.29
CSB-PGBD3P0DP91 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC6.99□□□□□ -1.29
CSB-PGBD3P0DP91 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC6.99□□□□□ -1.29
CSB-PGBD3P0DP91 RPL21P5-201ENST00000554662 472 ntBASIC6.99□□□□□ -1.29
CSB-PGBD3P0DP91 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC6.99□□□□□ -1.29
CSB-PGBD3P0DP91 AC006116.10-201ENST00000591836 581 ntBASIC6.99□□□□□ -1.29
CSB-PGBD3P0DP91 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC6.99□□□□□ -1.29
CSB-PGBD3P0DP91 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC6.99□□□□□ -1.29
CSB-PGBD3P0DP91 AC234771.5-201ENST00000600161 514 ntBASIC6.99□□□□□ -1.29
CSB-PGBD3P0DP91 AC012507.3-201ENST00000603556 477 ntBASIC6.99□□□□□ -1.29
CSB-PGBD3P0DP91 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC6.99□□□□□ -1.29
CSB-PGBD3P0DP91 AC090948.2-201ENST00000607363 564 ntBASIC6.99□□□□□ -1.29
CSB-PGBD3P0DP91 AL627230.1-201ENST00000613077 211 ntBASIC6.99□□□□□ -1.29
CSB-PGBD3P0DP91 AL591926.8-201ENST00000616876 211 ntBASIC6.99□□□□□ -1.29
CSB-PGBD3P0DP91 C2orf27A-204ENST00000623058 969 ntBASIC6.99□□□□□ -1.29
CSB-PGBD3P0DP91 MIR7641-1-201ENST00000627518 61 ntBASIC6.99□□□□□ -1.29
CSB-PGBD3P0DP91 AC099654.6-201ENST00000636487 512 ntBASIC6.99□□□□□ -1.29
CSB-PGBD3P0DP91 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CSB-PGBD3P0DP91 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CSB-PGBD3P0DP91 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CSB-PGBD3P0DP91 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.99□□□□□ -1.29
CSB-PGBD3P0DP91 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC6.99□□□□□ -1.29
CSB-PGBD3P0DP91 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
CSB-PGBD3P0DP91 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
CSB-PGBD3P0DP91 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CSB-PGBD3P0DP91 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
CSB-PGBD3P0DP91 AC007159.1-201ENST00000566529 4706 ntBASIC6.99□□□□□ -1.29
CSB-PGBD3P0DP91 AC010329.2-201ENST00000595195 2737 ntBASIC6.99□□□□□ -1.29
CSB-PGBD3P0DP91 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.99□□□□□ -1.29
CSB-PGBD3P0DP91 AL359955.1-201ENST00000455242 3275 ntBASIC6.98□□□□□ -1.29
CSB-PGBD3P0DP91 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC6.98□□□□□ -1.29
CSB-PGBD3P0DP91 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CSB-PGBD3P0DP91 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
CSB-PGBD3P0DP91 MTCO1P7-201ENST00000419523 1542 ntBASIC6.98□□□□□ -1.29
CSB-PGBD3P0DP91 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
CSB-PGBD3P0DP91 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
CSB-PGBD3P0DP91 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.98□□□□□ -1.29
CSB-PGBD3P0DP91 U8.3-201ENST00000363321 132 ntBASIC6.98□□□□□ -1.29
CSB-PGBD3P0DP91 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
CSB-PGBD3P0DP91 RNU6-574P-201ENST00000384265 107 ntBASIC6.98□□□□□ -1.29
CSB-PGBD3P0DP91 RNU6-463P-201ENST00000384340 107 ntBASIC6.98□□□□□ -1.29
CSB-PGBD3P0DP91 PEX12P1-201ENST00000400284 1048 ntBASIC6.98□□□□□ -1.29
CSB-PGBD3P0DP91 RPS4XP9-201ENST00000405151 780 ntBASIC6.98□□□□□ -1.29
CSB-PGBD3P0DP91 MIR1182-201ENST00000408363 97 ntBASIC6.98□□□□□ -1.29
CSB-PGBD3P0DP91 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC6.98□□□□□ -1.29
CSB-PGBD3P0DP91 RPS7P15-201ENST00000415804 584 ntBASIC6.98□□□□□ -1.29
CSB-PGBD3P0DP91 RAD23BP1-201ENST00000421404 1227 ntBASIC6.98□□□□□ -1.29
CSB-PGBD3P0DP91 AL031736.2-201ENST00000426573 787 ntBASIC6.98□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms