Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.51□□□□□ -1.85
COL1A1P02452 YWHAEP4-201ENST00000505390 198 ntBASIC3.51□□□□□ -1.85
COL1A1P02452 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.51□□□□□ -1.85
COL1A1P02452 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.51□□□□□ -1.85
COL1A1P02452 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.51□□□□□ -1.85
COL1A1P02452 AL096803.3-201ENST00000609032 532 ntBASIC3.51□□□□□ -1.85
COL1A1P02452 AC131238.1-201ENST00000617135 328 ntBASIC3.51□□□□□ -1.85
COL1A1P02452 IGHVIII-44-202ENST00000636235 289 ntBASIC3.51□□□□□ -1.85
COL1A1P02452 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
COL1A1P02452 AL365361.1-201ENST00000566942 3481 ntBASIC3.51□□□□□ -1.85
COL1A1P02452 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
COL1A1P02452 DDX18P3-201ENST00000404856 2007 ntBASIC3.51□□□□□ -1.85
COL1A1P02452 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
COL1A1P02452 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
COL1A1P02452 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.5□□□□□ -1.85
COL1A1P02452 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.5□□□□□ -1.85
COL1A1P02452 HMGB3P23-201ENST00000414981 585 ntBASIC3.5□□□□□ -1.85
COL1A1P02452 RPL32P35-201ENST00000415214 394 ntBASIC3.5□□□□□ -1.85
COL1A1P02452 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC3.5□□□□□ -1.85
COL1A1P02452 AL035407.1-201ENST00000429211 571 ntBASIC3.5□□□□□ -1.85
COL1A1P02452 AC105402.2-201ENST00000438503 358 ntBASIC3.5□□□□□ -1.85
COL1A1P02452 AC098583.1-201ENST00000480875 255 ntBASIC3.5□□□□□ -1.85
COL1A1P02452 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC3.5□□□□□ -1.85
COL1A1P02452 LDHBP3-201ENST00000514909 822 ntBASIC3.5□□□□□ -1.85
COL1A1P02452 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
COL1A1P02452 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.5□□□□□ -1.85
COL1A1P02452 AC022960.2-201ENST00000616300 666 ntBASIC3.5□□□□□ -1.85
COL1A1P02452 AP002967.1-201ENST00000624203 539 ntBASIC3.5□□□□□ -1.85
COL1A1P02452 AC010149.2-201ENST00000637608 315 ntBASIC3.5□□□□□ -1.85
COL1A1P02452 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
COL1A1P02452 ASNSP1-201ENST00000518311 1939 ntBASIC3.5□□□□□ -1.85
COL1A1P02452 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
COL1A1P02452 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
COL1A1P02452 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.49□□□□□ -1.85
COL1A1P02452 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.49□□□□□ -1.85
COL1A1P02452 MIR708-201ENST00000390708 88 ntBASIC3.49□□□□□ -1.85
COL1A1P02452 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.49□□□□□ -1.85
COL1A1P02452 RPL7P36-201ENST00000444633 681 ntBASIC3.49□□□□□ -1.85
COL1A1P02452 RAB28P3-201ENST00000448325 597 ntBASIC3.49□□□□□ -1.85
COL1A1P02452 AC125238.1-201ENST00000448842 249 ntBASIC3.49□□□□□ -1.85
COL1A1P02452 AL162389.1-201ENST00000449233 177 ntBASIC3.49□□□□□ -1.85
COL1A1P02452 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.49□□□□□ -1.85
COL1A1P02452 AC117522.3-201ENST00000507974 584 ntBASIC3.49□□□□□ -1.85
COL1A1P02452 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC3.49□□□□□ -1.85
COL1A1P02452 AC017037.2-201ENST00000513850 890 ntBASIC3.49□□□□□ -1.85
COL1A1P02452 RFPL4AP3-201ENST00000515267 345 ntBASIC3.49□□□□□ -1.85
COL1A1P02452 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC3.49□□□□□ -1.85
COL1A1P02452 IGKV2D-23-201ENST00000518179 286 ntBASIC3.49□□□□□ -1.85
COL1A1P02452 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.49□□□□□ -1.85
COL1A1P02452 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC3.49□□□□□ -1.85
COL1A1P02452 AL512310.1-201ENST00000548639 172 ntBASIC3.49□□□□□ -1.85
COL1A1P02452 AC122134.1-201ENST00000565664 1104 ntBASIC3.49□□□□□ -1.85
COL1A1P02452 MIR5047-201ENST00000579212 100 ntBASIC3.49□□□□□ -1.85
COL1A1P02452 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.49□□□□□ -1.85
COL1A1P02452 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
COL1A1P02452 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
COL1A1P02452 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
COL1A1P02452 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
COL1A1P02452 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
COL1A1P02452 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
COL1A1P02452 RNU6-859P-201ENST00000362728 107 ntBASIC3.48□□□□□ -1.85
COL1A1P02452 RPL23AP4-201ENST00000427757 463 ntBASIC3.48□□□□□ -1.85
COL1A1P02452 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
COL1A1P02452 RPL21P40-201ENST00000428586 483 ntBASIC3.48□□□□□ -1.85
COL1A1P02452 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.48□□□□□ -1.85
COL1A1P02452 AC093278.1-201ENST00000494700 600 ntBASIC3.48□□□□□ -1.85
COL1A1P02452 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
COL1A1P02452 AC034159.1-201ENST00000513885 583 ntBASIC3.48□□□□□ -1.85
COL1A1P02452 EIF5A2P1-201ENST00000564027 460 ntBASIC3.48□□□□□ -1.85
COL1A1P02452 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.48□□□□□ -1.85
COL1A1P02452 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.48□□□□□ -1.85
COL1A1P02452 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
COL1A1P02452 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
COL1A1P02452 RLIMP2-201ENST00000427891 1563 ntBASIC3.48□□□□□ -1.85
COL1A1P02452 AL450326.2-201ENST00000421913 1962 ntBASIC3.48□□□□□ -1.85
COL1A1P02452 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
COL1A1P02452 AC093010.3-201ENST00000570269 15214 ntBASIC3.48□□□□□ -1.85
COL1A1P02452 U3.12-201ENST00000364498 214 ntBASIC3.47□□□□□ -1.85
COL1A1P02452 MIR9-1-201ENST00000385198 89 ntBASIC3.47□□□□□ -1.85
COL1A1P02452 AC245054.2-201ENST00000415639 319 ntBASIC3.47□□□□□ -1.85
COL1A1P02452 Z93242.1-201ENST00000427102 353 ntBASIC3.47□□□□□ -1.85
COL1A1P02452 RPL23AP14-201ENST00000468281 468 ntBASIC3.47□□□□□ -1.85
COL1A1P02452 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC3.47□□□□□ -1.85
COL1A1P02452 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.47□□□□□ -1.85
COL1A1P02452 AC067852.4-201ENST00000590314 478 ntBASIC3.47□□□□□ -1.85
COL1A1P02452 AC087468.1-201ENST00000604365 630 ntBASIC3.47□□□□□ -1.85
COL1A1P02452 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
COL1A1P02452 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.47□□□□□ -1.85
COL1A1P02452 AC108206.1-201ENST00000570186 4159 ntBASIC3.47□□□□□ -1.85
COL1A1P02452 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.47□□□□□ -1.85
COL1A1P02452 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
COL1A1P02452 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.47□□□□□ -1.85
COL1A1P02452 TXNP6-201ENST00000510190 310 ntBASIC3.47□□□□□ -1.85
COL1A1P02452 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.47□□□□□ -1.85
COL1A1P02452 SCGB1D5P-201ENST00000515134 247 ntBASIC3.47□□□□□ -1.85
COL1A1P02452 AC068657.1-201ENST00000520807 306 ntBASIC3.47□□□□□ -1.85
COL1A1P02452 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.47□□□□□ -1.85
COL1A1P02452 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.47□□□□□ -1.85
COL1A1P02452 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.47□□□□□ -1.85
COL1A1P02452 OR6R2P-201ENST00000609216 300 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms