Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
TNFP01375 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC2.94□□□□□ -1.94
TNFP01375 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.94□□□□□ -1.94
TNFP01375 AC139713.2-210ENST00000641741 992 ntBASIC2.94□□□□□ -1.94
TNFP01375 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
TNFP01375 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC2.94□□□□□ -1.94
TNFP01375 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
TNFP01375 AC000367.1-201ENST00000452711 1766 ntBASIC2.94□□□□□ -1.94
TNFP01375 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
TNFP01375 AL139811.1-201ENST00000424779 2299 ntBASIC2.94□□□□□ -1.94
TNFP01375 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
TNFP01375 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
TNFP01375 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
TNFP01375 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.93□□□□□ -1.94
TNFP01375 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
TNFP01375 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.93□□□□□ -1.94
TNFP01375 MIR124-3-201ENST00000384866 87 ntBASIC2.93□□□□□ -1.94
TNFP01375 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
TNFP01375 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC2.93□□□□□ -1.94
TNFP01375 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC2.93□□□□□ -1.94
TNFP01375 MTCYBP31-201ENST00000438855 1122 ntBASIC2.93□□□□□ -1.94
TNFP01375 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.93□□□□□ -1.94
TNFP01375 HMGB3P6-201ENST00000444896 598 ntBASIC2.93□□□□□ -1.94
TNFP01375 CCRL1P1-201ENST00000449542 1053 ntBASIC2.93□□□□□ -1.94
TNFP01375 SNORA59A-201ENST00000459326 152 ntBASIC2.93□□□□□ -1.94
TNFP01375 RN7SL20P-201ENST00000488827 297 ntBASIC2.93□□□□□ -1.94
TNFP01375 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC2.93□□□□□ -1.94
TNFP01375 THAP6-203ENST00000502620 582 ntTSL 3 BASIC2.93□□□□□ -1.94
TNFP01375 AC111000.2-201ENST00000507775 550 ntBASIC2.93□□□□□ -1.94
TNFP01375 AC026801.2-201ENST00000515352 425 ntBASIC2.93□□□□□ -1.94
TNFP01375 RNU1-143P-201ENST00000516296 146 ntBASIC2.93□□□□□ -1.94
TNFP01375 AC090136.1-201ENST00000520009 240 ntBASIC2.93□□□□□ -1.94
TNFP01375 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
TNFP01375 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC2.93□□□□□ -1.94
TNFP01375 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.93□□□□□ -1.94
TNFP01375 U1.23-201ENST00000610293 146 ntBASIC2.93□□□□□ -1.94
TNFP01375 AC099778.2-201ENST00000610904 211 ntBASIC2.93□□□□□ -1.94
TNFP01375 RNU1-68P-201ENST00000615382 146 ntBASIC2.93□□□□□ -1.94
TNFP01375 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC2.93□□□□□ -1.94
TNFP01375 XIST_intron.1-201ENST00000619444 68 ntBASIC2.93□□□□□ -1.94
TNFP01375 U1.39-201ENST00000621562 146 ntBASIC2.93□□□□□ -1.94
TNFP01375 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
TNFP01375 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
TNFP01375 ZNF542P-204ENST00000482727 1305 ntBASIC2.93□□□□□ -1.94
TNFP01375 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
TNFP01375 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
TNFP01375 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
TNFP01375 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
TNFP01375 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC2.92□□□□□ -1.94
TNFP01375 GABPAP-201ENST00000419271 1356 ntBASIC2.92□□□□□ -1.94
TNFP01375 ZNF826P-207ENST00000622273 1910 ntBASIC2.92□□□□□ -1.94
TNFP01375 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
TNFP01375 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
TNFP01375 U3.11-201ENST00000364476 212 ntBASIC2.92□□□□□ -1.94
TNFP01375 RNA5SP167-201ENST00000365461 116 ntBASIC2.92□□□□□ -1.94
TNFP01375 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC2.92□□□□□ -1.94
TNFP01375 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC2.92□□□□□ -1.94
TNFP01375 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC2.92□□□□□ -1.94
TNFP01375 AC119751.5-201ENST00000514077 770 ntBASIC2.92□□□□□ -1.94
TNFP01375 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC2.92□□□□□ -1.94
TNFP01375 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.92□□□□□ -1.94
TNFP01375 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC2.92□□□□□ -1.94
TNFP01375 RNU4ATAC15P-201ENST00000516415 126 ntBASIC2.92□□□□□ -1.94
TNFP01375 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
TNFP01375 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC2.92□□□□□ -1.94
TNFP01375 MTND2P17-201ENST00000550281 688 ntBASIC2.92□□□□□ -1.94
TNFP01375 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC2.92□□□□□ -1.94
TNFP01375 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
TNFP01375 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC2.92□□□□□ -1.94
TNFP01375 AC008507.1-201ENST00000587506 734 ntBASIC2.92□□□□□ -1.94
TNFP01375 AC007687.1-201ENST00000602704 304 ntBASIC2.92□□□□□ -1.94
TNFP01375 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.92□□□□□ -1.94
TNFP01375 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.92□□□□□ -1.94
TNFP01375 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.92□□□□□ -1.94
TNFP01375 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
TNFP01375 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
TNFP01375 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.92□□□□□ -1.94
TNFP01375 AP001148.1-201ENST00000624124 2359 ntBASIC2.92□□□□□ -1.94
TNFP01375 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC2.91□□□□□ -1.94
TNFP01375 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.91□□□□□ -1.94
TNFP01375 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
TNFP01375 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC2.91□□□□□ -1.94
TNFP01375 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
TNFP01375 SNORA5B-201ENST00000363786 132 ntBASIC2.91□□□□□ -1.94
TNFP01375 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
TNFP01375 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
TNFP01375 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC2.91□□□□□ -1.94
TNFP01375 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC2.91□□□□□ -1.94
TNFP01375 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.91□□□□□ -1.94
TNFP01375 AL445528.1-201ENST00000426330 420 ntBASIC2.91□□□□□ -1.94
TNFP01375 AL139132.1-201ENST00000431587 344 ntBASIC2.91□□□□□ -1.94
TNFP01375 AP000873.1-201ENST00000463987 400 ntBASIC2.91□□□□□ -1.94
TNFP01375 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC2.91□□□□□ -1.94
TNFP01375 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC2.91□□□□□ -1.94
TNFP01375 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.91□□□□□ -1.94
TNFP01375 OR5G4P-201ENST00000525251 760 ntBASIC2.91□□□□□ -1.94
TNFP01375 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC2.91□□□□□ -1.94
TNFP01375 AC068714.1-201ENST00000559623 800 ntBASIC2.91□□□□□ -1.94
TNFP01375 MIR4512-201ENST00000583257 77 ntBASIC2.91□□□□□ -1.94
TNFP01375 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 137.7 ms