Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC3.52□□□□□ -1.85
CTDNEP1O95476 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.52□□□□□ -1.85
CTDNEP1O95476 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC3.52□□□□□ -1.85
CTDNEP1O95476 AC079880.2-201ENST00000603790 1213 ntBASIC3.52□□□□□ -1.85
CTDNEP1O95476 AC124312.4-201ENST00000605533 310 ntBASIC3.52□□□□□ -1.85
CTDNEP1O95476 AC084036.1-201ENST00000609190 508 ntBASIC3.52□□□□□ -1.85
CTDNEP1O95476 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.52□□□□□ -1.85
CTDNEP1O95476 AC139769.3-201ENST00000618383 175 ntBASIC3.52□□□□□ -1.85
CTDNEP1O95476 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.52□□□□□ -1.85
CTDNEP1O95476 AL118508.4-201ENST00000624142 1176 ntBASIC3.52□□□□□ -1.85
CTDNEP1O95476 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CTDNEP1O95476 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CTDNEP1O95476 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
CTDNEP1O95476 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CTDNEP1O95476 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
CTDNEP1O95476 RNA5SP374-201ENST00000362939 125 ntBASIC3.51□□□□□ -1.85
CTDNEP1O95476 MIR421-201ENST00000365696 85 ntBASIC3.51□□□□□ -1.85
CTDNEP1O95476 MIR34B-201ENST00000385076 84 ntBASIC3.51□□□□□ -1.85
CTDNEP1O95476 GSTA8P-201ENST00000404253 637 ntBASIC3.51□□□□□ -1.85
CTDNEP1O95476 RN7SKP220-201ENST00000410611 288 ntBASIC3.51□□□□□ -1.85
CTDNEP1O95476 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.51□□□□□ -1.85
CTDNEP1O95476 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC3.51□□□□□ -1.85
CTDNEP1O95476 AC114878.1-201ENST00000441166 358 ntBASIC3.51□□□□□ -1.85
CTDNEP1O95476 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.51□□□□□ -1.85
CTDNEP1O95476 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.51□□□□□ -1.85
CTDNEP1O95476 CEACAMP4-201ENST00000457676 421 ntBASIC3.51□□□□□ -1.85
CTDNEP1O95476 AP001086.1-201ENST00000494882 321 ntBASIC3.51□□□□□ -1.85
CTDNEP1O95476 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.51□□□□□ -1.85
CTDNEP1O95476 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC3.51□□□□□ -1.85
CTDNEP1O95476 RN7SKP43-201ENST00000516173 320 ntBASIC3.51□□□□□ -1.85
CTDNEP1O95476 Vault.1-201ENST00000516474 102 ntBASIC3.51□□□□□ -1.85
CTDNEP1O95476 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
CTDNEP1O95476 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC3.51□□□□□ -1.85
CTDNEP1O95476 AC012414.2-201ENST00000559474 187 ntBASIC3.51□□□□□ -1.85
CTDNEP1O95476 AC022884.3-201ENST00000579571 248 ntBASIC3.51□□□□□ -1.85
CTDNEP1O95476 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC3.51□□□□□ -1.85
CTDNEP1O95476 HMGB1P51-201ENST00000605166 638 ntBASIC3.51□□□□□ -1.85
CTDNEP1O95476 AC103710.3-201ENST00000608157 948 ntBASIC3.51□□□□□ -1.85
CTDNEP1O95476 AC012531.5-201ENST00000611375 151 ntBASIC3.51□□□□□ -1.85
CTDNEP1O95476 AL354696.1-201ENST00000614652 497 ntBASIC3.51□□□□□ -1.85
CTDNEP1O95476 RPL23AP61-201ENST00000623642 466 ntBASIC3.51□□□□□ -1.85
CTDNEP1O95476 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
CTDNEP1O95476 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CTDNEP1O95476 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.51□□□□□ -1.85
CTDNEP1O95476 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CTDNEP1O95476 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CTDNEP1O95476 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CTDNEP1O95476 OR52E6-202ENST00000379946 954 ntBASIC3.5□□□□□ -1.85
CTDNEP1O95476 RPL31P1-201ENST00000398116 372 ntBASIC3.5□□□□□ -1.85
CTDNEP1O95476 RPL7P25-201ENST00000404151 721 ntBASIC3.5□□□□□ -1.85
CTDNEP1O95476 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.5□□□□□ -1.85
CTDNEP1O95476 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.5□□□□□ -1.85
CTDNEP1O95476 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.5□□□□□ -1.85
CTDNEP1O95476 AL159169.1-201ENST00000421119 127 ntBASIC3.5□□□□□ -1.85
CTDNEP1O95476 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.5□□□□□ -1.85
CTDNEP1O95476 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.5□□□□□ -1.85
CTDNEP1O95476 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.5□□□□□ -1.85
CTDNEP1O95476 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.5□□□□□ -1.85
CTDNEP1O95476 SNORD108-201ENST00000459332 71 ntBASIC3.5□□□□□ -1.85
CTDNEP1O95476 AP000873.1-201ENST00000463987 400 ntBASIC3.5□□□□□ -1.85
CTDNEP1O95476 RN7SL807P-201ENST00000470923 297 ntBASIC3.5□□□□□ -1.85
CTDNEP1O95476 SNX5P1-201ENST00000505757 1041 ntBASIC3.5□□□□□ -1.85
CTDNEP1O95476 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
CTDNEP1O95476 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
CTDNEP1O95476 PTGES3P3-201ENST00000511479 482 ntBASIC3.5□□□□□ -1.85
CTDNEP1O95476 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.5□□□□□ -1.85
CTDNEP1O95476 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.5□□□□□ -1.85
CTDNEP1O95476 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.5□□□□□ -1.85
CTDNEP1O95476 AP001180.3-201ENST00000582221 145 ntBASIC3.5□□□□□ -1.85
CTDNEP1O95476 AC012468.1-201ENST00000604888 430 ntBASIC3.5□□□□□ -1.85
CTDNEP1O95476 AL391834.1-201ENST00000609609 560 ntBASIC3.5□□□□□ -1.85
CTDNEP1O95476 AC084757.4-201ENST00000616350 526 ntBASIC3.5□□□□□ -1.85
CTDNEP1O95476 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.5□□□□□ -1.85
CTDNEP1O95476 AC119674.1-220ENST00000641502 1048 ntBASIC3.5□□□□□ -1.85
CTDNEP1O95476 GABRG2-229ENST00000641017 3628 ntBASIC3.5□□□□□ -1.85
CTDNEP1O95476 GTF2H2B-203ENST00000508065 1432 ntBASIC3.5□□□□□ -1.85
CTDNEP1O95476 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CTDNEP1O95476 DCAF13P3-201ENST00000561147 1334 ntBASIC3.49□□□□□ -1.85
CTDNEP1O95476 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
CTDNEP1O95476 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CTDNEP1O95476 MIR22-201ENST00000362190 85 ntBASIC3.49□□□□□ -1.85
CTDNEP1O95476 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.49□□□□□ -1.85
CTDNEP1O95476 AL590623.1-201ENST00000427864 105 ntBASIC3.49□□□□□ -1.85
CTDNEP1O95476 AC006028.1-201ENST00000438379 402 ntBASIC3.49□□□□□ -1.85
CTDNEP1O95476 HGF-207ENST00000453018 721 ntTSL 3 BASIC3.49□□□□□ -1.85
CTDNEP1O95476 TVP23BP2-201ENST00000455082 615 ntBASIC3.49□□□□□ -1.85
CTDNEP1O95476 RNU7-27P-201ENST00000459281 62 ntBASIC3.49□□□□□ -1.85
CTDNEP1O95476 RPL5P13-201ENST00000462840 709 ntBASIC3.49□□□□□ -1.85
CTDNEP1O95476 AC023050.1-201ENST00000498198 304 ntBASIC3.49□□□□□ -1.85
CTDNEP1O95476 TRAV31-201ENST00000502780 342 ntBASIC3.49□□□□□ -1.85
CTDNEP1O95476 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CTDNEP1O95476 MTND2P31-201ENST00000512602 616 ntBASIC3.49□□□□□ -1.85
CTDNEP1O95476 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.49□□□□□ -1.85
CTDNEP1O95476 RNU6-491P-201ENST00000516099 110 ntBASIC3.49□□□□□ -1.85
CTDNEP1O95476 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC3.49□□□□□ -1.85
CTDNEP1O95476 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.49□□□□□ -1.85
CTDNEP1O95476 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.49□□□□□ -1.85
CTDNEP1O95476 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.49□□□□□ -1.85
CTDNEP1O95476 SRGNP1-201ENST00000603392 451 ntBASIC3.49□□□□□ -1.85
CTDNEP1O95476 AC007566.2-201ENST00000603642 413 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms