Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SEMA3DO95025 AC008264.1-201ENST00000447612 367 ntBASIC3.28□□□□□ -1.88
SEMA3DO95025 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.28□□□□□ -1.88
SEMA3DO95025 MTND5P8-201ENST00000449817 1083 ntBASIC3.28□□□□□ -1.88
SEMA3DO95025 TPRKBP1-201ENST00000456243 481 ntBASIC3.28□□□□□ -1.88
SEMA3DO95025 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.28□□□□□ -1.88
SEMA3DO95025 RPL7P5-201ENST00000471472 736 ntBASIC3.28□□□□□ -1.88
SEMA3DO95025 NCOR1P1-202ENST00000486162 291 ntBASIC3.28□□□□□ -1.88
SEMA3DO95025 AC006483.1-201ENST00000487308 313 ntBASIC3.28□□□□□ -1.88
SEMA3DO95025 TXNP6-201ENST00000510190 310 ntBASIC3.28□□□□□ -1.88
SEMA3DO95025 AC026403.1-201ENST00000518938 295 ntBASIC3.28□□□□□ -1.88
SEMA3DO95025 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
SEMA3DO95025 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC3.28□□□□□ -1.88
SEMA3DO95025 OR8L1P-201ENST00000534005 955 ntBASIC3.28□□□□□ -1.88
SEMA3DO95025 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.28□□□□□ -1.88
SEMA3DO95025 TRAV37-201ENST00000553906 342 ntBASIC3.28□□□□□ -1.88
SEMA3DO95025 AC006130.2-201ENST00000586202 326 ntBASIC3.28□□□□□ -1.88
SEMA3DO95025 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.28□□□□□ -1.88
SEMA3DO95025 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
SEMA3DO95025 AL451074.6-201ENST00000608512 729 ntBASIC3.28□□□□□ -1.88
SEMA3DO95025 AC039056.2-201ENST00000622261 511 ntBASIC3.28□□□□□ -1.88
SEMA3DO95025 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SEMA3DO95025 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
SEMA3DO95025 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.28□□□□□ -1.88
SEMA3DO95025 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
SEMA3DO95025 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
SEMA3DO95025 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SEMA3DO95025 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SEMA3DO95025 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.27□□□□□ -1.89
SEMA3DO95025 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.27□□□□□ -1.89
SEMA3DO95025 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
SEMA3DO95025 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.27□□□□□ -1.89
SEMA3DO95025 RNU1-75P-201ENST00000347264 129 ntBASIC3.27□□□□□ -1.89
SEMA3DO95025 SNORD51.1-201ENST00000365405 77 ntBASIC3.27□□□□□ -1.89
SEMA3DO95025 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SEMA3DO95025 RNU6-883P-201ENST00000384597 107 ntBASIC3.27□□□□□ -1.89
SEMA3DO95025 NPM1P10-201ENST00000398310 865 ntBASIC3.27□□□□□ -1.89
SEMA3DO95025 RNA5SP31-201ENST00000411144 127 ntBASIC3.27□□□□□ -1.89
SEMA3DO95025 CRYBB2P1-203ENST00000415709 538 ntBASIC3.27□□□□□ -1.89
SEMA3DO95025 LINC01347-201ENST00000417964 355 ntBASIC3.27□□□□□ -1.89
SEMA3DO95025 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.27□□□□□ -1.89
SEMA3DO95025 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.27□□□□□ -1.89
SEMA3DO95025 RSL24D1P8-201ENST00000434442 492 ntBASIC3.27□□□□□ -1.89
SEMA3DO95025 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.27□□□□□ -1.89
SEMA3DO95025 RPL21P23-201ENST00000446654 460 ntBASIC3.27□□□□□ -1.89
SEMA3DO95025 AL359073.1-201ENST00000448036 403 ntBASIC3.27□□□□□ -1.89
SEMA3DO95025 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.27□□□□□ -1.89
SEMA3DO95025 HMGN2P16-201ENST00000456802 261 ntBASIC3.27□□□□□ -1.89
SEMA3DO95025 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.27□□□□□ -1.89
SEMA3DO95025 RPL21P8-201ENST00000465083 535 ntBASIC3.27□□□□□ -1.89
SEMA3DO95025 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SEMA3DO95025 AC112198.1-201ENST00000505369 1220 ntBASIC3.27□□□□□ -1.89
SEMA3DO95025 MTND4LP22-201ENST00000508209 276 ntBASIC3.27□□□□□ -1.89
SEMA3DO95025 HMGN1P15-201ENST00000513870 295 ntBASIC3.27□□□□□ -1.89
SEMA3DO95025 RNU6-362P-201ENST00000516736 90 ntBASIC3.27□□□□□ -1.89
SEMA3DO95025 TRMT10BP1-201ENST00000519377 943 ntBASIC3.27□□□□□ -1.89
SEMA3DO95025 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.27□□□□□ -1.89
SEMA3DO95025 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.27□□□□□ -1.89
SEMA3DO95025 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.27□□□□□ -1.89
SEMA3DO95025 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.27□□□□□ -1.89
SEMA3DO95025 POLR2KP1-201ENST00000553226 168 ntBASIC3.27□□□□□ -1.89
SEMA3DO95025 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.27□□□□□ -1.89
SEMA3DO95025 PCNAP1-202ENST00000595299 752 ntBASIC3.27□□□□□ -1.89
SEMA3DO95025 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.27□□□□□ -1.89
SEMA3DO95025 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
SEMA3DO95025 AL356490.1-201ENST00000623079 479 ntBASIC3.27□□□□□ -1.89
SEMA3DO95025 AC243312.2-201ENST00000623340 601 ntBASIC3.27□□□□□ -1.89
SEMA3DO95025 AL034408.1-202ENST00000636088 415 ntBASIC3.27□□□□□ -1.89
SEMA3DO95025 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
SEMA3DO95025 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.27□□□□□ -1.89
SEMA3DO95025 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.27□□□□□ -1.89
SEMA3DO95025 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SEMA3DO95025 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.27□□□□□ -1.89
SEMA3DO95025 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SEMA3DO95025 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
SEMA3DO95025 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.26□□□□□ -1.89
SEMA3DO95025 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SEMA3DO95025 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.26□□□□□ -1.89
SEMA3DO95025 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SEMA3DO95025 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.26□□□□□ -1.89
SEMA3DO95025 Y_RNA.126-201ENST00000363382 111 ntBASIC3.26□□□□□ -1.89
SEMA3DO95025 SNORA73.2-201ENST00000364946 201 ntBASIC3.26□□□□□ -1.89
SEMA3DO95025 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SEMA3DO95025 AL590290.1-201ENST00000405336 380 ntBASIC3.26□□□□□ -1.89
SEMA3DO95025 Z99755.1-201ENST00000414048 380 ntBASIC3.26□□□□□ -1.89
SEMA3DO95025 ARL2BPP3-201ENST00000421226 480 ntBASIC3.26□□□□□ -1.89
SEMA3DO95025 ZFAND6P1-201ENST00000434138 605 ntBASIC3.26□□□□□ -1.89
SEMA3DO95025 AL590103.1-201ENST00000434488 307 ntBASIC3.26□□□□□ -1.89
SEMA3DO95025 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.26□□□□□ -1.89
SEMA3DO95025 AC097262.1-201ENST00000452559 548 ntBASIC3.26□□□□□ -1.89
SEMA3DO95025 NF1P3-201ENST00000457709 450 ntBASIC3.26□□□□□ -1.89
SEMA3DO95025 AC091179.1-201ENST00000461606 579 ntBASIC3.26□□□□□ -1.89
SEMA3DO95025 HESX1-202ENST00000473921 757 ntTSL 5 BASIC3.26□□□□□ -1.89
SEMA3DO95025 AC104687.1-201ENST00000485829 412 ntBASIC3.26□□□□□ -1.89
SEMA3DO95025 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.26□□□□□ -1.89
SEMA3DO95025 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.26□□□□□ -1.89
SEMA3DO95025 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC3.26□□□□□ -1.89
SEMA3DO95025 RNU1-45P-201ENST00000517191 141 ntBASIC3.26□□□□□ -1.89
SEMA3DO95025 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.26□□□□□ -1.89
SEMA3DO95025 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms