Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.71□□□□□ -1.66
VPS4BO75351 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
VPS4BO75351 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
VPS4BO75351 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
VPS4BO75351 AP000756.2-201ENST00000624168 2567 ntBASIC4.71□□□□□ -1.66
VPS4BO75351 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
VPS4BO75351 PHKBP1-201ENST00000450951 1951 ntBASIC4.71□□□□□ -1.66
VPS4BO75351 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
VPS4BO75351 AC097504.1-201ENST00000515103 2415 ntBASIC4.71□□□□□ -1.66
VPS4BO75351 GDI2P1-201ENST00000429312 1336 ntBASIC4.71□□□□□ -1.66
VPS4BO75351 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.7□□□□□ -1.66
VPS4BO75351 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
VPS4BO75351 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
VPS4BO75351 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
VPS4BO75351 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
VPS4BO75351 RNU6-178P-201ENST00000384631 104 ntBASIC4.7□□□□□ -1.66
VPS4BO75351 SNRPEP2-201ENST00000397592 279 ntBASIC4.7□□□□□ -1.66
VPS4BO75351 AL049693.1-201ENST00000402760 611 ntBASIC4.7□□□□□ -1.66
VPS4BO75351 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.7□□□□□ -1.66
VPS4BO75351 RN7SKP27-201ENST00000410684 333 ntBASIC4.7□□□□□ -1.66
VPS4BO75351 RNU6-603P-201ENST00000411403 107 ntBASIC4.7□□□□□ -1.66
VPS4BO75351 VDAC1P9-201ENST00000412766 841 ntBASIC4.7□□□□□ -1.66
VPS4BO75351 B3GALNT1P1-201ENST00000420569 975 ntBASIC4.7□□□□□ -1.66
VPS4BO75351 FNDC3CP-201ENST00000420795 1155 ntBASIC4.7□□□□□ -1.66
VPS4BO75351 RPL7P30-201ENST00000420888 709 ntBASIC4.7□□□□□ -1.66
VPS4BO75351 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC4.7□□□□□ -1.66
VPS4BO75351 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.7□□□□□ -1.66
VPS4BO75351 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.7□□□□□ -1.66
VPS4BO75351 RPL23AP16-201ENST00000441715 421 ntBASIC4.7□□□□□ -1.66
VPS4BO75351 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.7□□□□□ -1.66
VPS4BO75351 EEF1A1P1-201ENST00000447052 739 ntBASIC4.7□□□□□ -1.66
VPS4BO75351 SNRPFP4-201ENST00000456366 242 ntBASIC4.7□□□□□ -1.66
VPS4BO75351 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC4.7□□□□□ -1.66
VPS4BO75351 snoU13.1-201ENST00000459157 104 ntBASIC4.7□□□□□ -1.66
VPS4BO75351 OR9M1P-201ENST00000459641 921 ntBASIC4.7□□□□□ -1.66
VPS4BO75351 RPL30P11-201ENST00000495304 339 ntBASIC4.7□□□□□ -1.66
VPS4BO75351 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
VPS4BO75351 AC109927.2-201ENST00000506416 303 ntBASIC4.7□□□□□ -1.66
VPS4BO75351 AC109464.2-201ENST00000510242 943 ntBASIC4.7□□□□□ -1.66
VPS4BO75351 AC104986.1-201ENST00000517978 436 ntBASIC4.7□□□□□ -1.66
VPS4BO75351 IGKV1-32-201ENST00000519290 311 ntBASIC4.7□□□□□ -1.66
VPS4BO75351 OR5G4P-201ENST00000525251 760 ntBASIC4.7□□□□□ -1.66
VPS4BO75351 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.7□□□□□ -1.66
VPS4BO75351 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.7□□□□□ -1.66
VPS4BO75351 AC245505.1-201ENST00000556398 224 ntBASIC4.7□□□□□ -1.66
VPS4BO75351 AC136624.4-201ENST00000573044 370 ntBASIC4.7□□□□□ -1.66
VPS4BO75351 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.7□□□□□ -1.66
VPS4BO75351 AC005191.1-201ENST00000603950 358 ntBASIC4.7□□□□□ -1.66
VPS4BO75351 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.7□□□□□ -1.66
VPS4BO75351 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
VPS4BO75351 AL359535.1-201ENST00000612100 1087 ntBASIC4.7□□□□□ -1.66
VPS4BO75351 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.7□□□□□ -1.66
VPS4BO75351 AC138932.5-201ENST00000617759 563 ntBASIC4.7□□□□□ -1.66
VPS4BO75351 AC068137.3-201ENST00000639191 341 ntBASIC4.7□□□□□ -1.66
VPS4BO75351 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC4.7□□□□□ -1.66
VPS4BO75351 AC073869.6-201ENST00000640656 341 ntBASIC4.7□□□□□ -1.66
VPS4BO75351 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.7□□□□□ -1.66
VPS4BO75351 SMG1P6-201ENST00000532337 2930 ntBASIC4.7□□□□□ -1.66
VPS4BO75351 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
VPS4BO75351 AC092435.4-201ENST00000623012 4159 ntBASIC4.7□□□□□ -1.66
VPS4BO75351 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.7□□□□□ -1.66
VPS4BO75351 AL445487.1-201ENST00000415694 1580 ntBASIC4.7□□□□□ -1.66
VPS4BO75351 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
VPS4BO75351 AL450326.2-201ENST00000421913 1962 ntBASIC4.69□□□□□ -1.66
VPS4BO75351 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.69□□□□□ -1.66
VPS4BO75351 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
VPS4BO75351 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
VPS4BO75351 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VPS4BO75351 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VPS4BO75351 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
VPS4BO75351 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.69□□□□□ -1.66
VPS4BO75351 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.69□□□□□ -1.66
VPS4BO75351 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
VPS4BO75351 RNU6-1293P-201ENST00000384077 107 ntBASIC4.69□□□□□ -1.66
VPS4BO75351 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC4.69□□□□□ -1.66
VPS4BO75351 RN7SKP266-201ENST00000410232 287 ntBASIC4.69□□□□□ -1.66
VPS4BO75351 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC4.69□□□□□ -1.66
VPS4BO75351 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
VPS4BO75351 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
VPS4BO75351 RPS27AP7-201ENST00000422792 455 ntBASIC4.69□□□□□ -1.66
VPS4BO75351 FABP7P1-201ENST00000424004 391 ntBASIC4.69□□□□□ -1.66
VPS4BO75351 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.69□□□□□ -1.66
VPS4BO75351 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
VPS4BO75351 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.69□□□□□ -1.66
VPS4BO75351 AC023347.2-201ENST00000433994 462 ntBASIC4.69□□□□□ -1.66
VPS4BO75351 RPL37P21-201ENST00000435890 276 ntBASIC4.69□□□□□ -1.66
VPS4BO75351 DNAJC19P4-201ENST00000440115 345 ntBASIC4.69□□□□□ -1.66
VPS4BO75351 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
VPS4BO75351 AC000111.2-201ENST00000448200 210 ntBASIC4.69□□□□□ -1.66
VPS4BO75351 ARPC3P5-201ENST00000448802 534 ntBASIC4.69□□□□□ -1.66
VPS4BO75351 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.69□□□□□ -1.66
VPS4BO75351 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.69□□□□□ -1.66
VPS4BO75351 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
VPS4BO75351 MEMO1P3-201ENST00000459811 302 ntBASIC4.69□□□□□ -1.66
VPS4BO75351 AC103987.1-201ENST00000473394 348 ntBASIC4.69□□□□□ -1.66
VPS4BO75351 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.69□□□□□ -1.66
VPS4BO75351 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.69□□□□□ -1.66
VPS4BO75351 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.69□□□□□ -1.66
VPS4BO75351 AC026412.2-201ENST00000512270 1075 ntBASIC4.69□□□□□ -1.66
VPS4BO75351 AC011352.1-201ENST00000512300 793 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms