Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 AC093853.1-201ENST00000515689 483 ntBASIC3.34□□□□□ -1.87
SHOX2O60902 RN7SKP43-201ENST00000516173 320 ntBASIC3.34□□□□□ -1.87
SHOX2O60902 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.34□□□□□ -1.87
SHOX2O60902 AP002812.4-201ENST00000532139 286 ntBASIC3.34□□□□□ -1.87
SHOX2O60902 AC074029.2-201ENST00000551045 634 ntBASIC3.34□□□□□ -1.87
SHOX2O60902 MIR4286-201ENST00000580651 93 ntBASIC3.34□□□□□ -1.87
SHOX2O60902 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.34□□□□□ -1.87
SHOX2O60902 MIR5187-201ENST00000583479 76 ntBASIC3.34□□□□□ -1.87
SHOX2O60902 MAGOH2P-202ENST00000584384 429 ntBASIC3.34□□□□□ -1.87
SHOX2O60902 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.34□□□□□ -1.87
SHOX2O60902 OR2BH1P-201ENST00000608850 864 ntBASIC3.34□□□□□ -1.87
SHOX2O60902 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SHOX2O60902 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SHOX2O60902 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.34□□□□□ -1.87
SHOX2O60902 GTF2H2B-203ENST00000508065 1432 ntBASIC3.34□□□□□ -1.88
SHOX2O60902 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.34□□□□□ -1.88
SHOX2O60902 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
SHOX2O60902 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.33□□□□□ -1.88
SHOX2O60902 AC117529.2-201ENST00000512159 2068 ntBASIC3.33□□□□□ -1.88
SHOX2O60902 MIR153-1-201ENST00000384914 90 ntBASIC3.33□□□□□ -1.88
SHOX2O60902 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
SHOX2O60902 RNU2-37P-201ENST00000410695 177 ntBASIC3.33□□□□□ -1.88
SHOX2O60902 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.33□□□□□ -1.88
SHOX2O60902 AL356806.1-201ENST00000422524 916 ntBASIC3.33□□□□□ -1.88
SHOX2O60902 AL591419.1-201ENST00000427423 339 ntBASIC3.33□□□□□ -1.88
SHOX2O60902 HMGN2P21-201ENST00000447764 270 ntBASIC3.33□□□□□ -1.88
SHOX2O60902 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.33□□□□□ -1.88
SHOX2O60902 AL133547.1-201ENST00000448546 220 ntBASIC3.33□□□□□ -1.88
SHOX2O60902 PTGES3P5-201ENST00000455109 434 ntBASIC3.33□□□□□ -1.88
SHOX2O60902 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC3.33□□□□□ -1.88
SHOX2O60902 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.33□□□□□ -1.88
SHOX2O60902 AC010460.1-201ENST00000507087 466 ntBASIC3.33□□□□□ -1.88
SHOX2O60902 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.33□□□□□ -1.88
SHOX2O60902 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.33□□□□□ -1.88
SHOX2O60902 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.33□□□□□ -1.88
SHOX2O60902 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.33□□□□□ -1.88
SHOX2O60902 AC009268.1-201ENST00000561352 1203 ntBASIC3.33□□□□□ -1.88
SHOX2O60902 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.33□□□□□ -1.88
SHOX2O60902 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.33□□□□□ -1.88
SHOX2O60902 ZNF92P3-201ENST00000596594 954 ntBASIC3.33□□□□□ -1.88
SHOX2O60902 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.33□□□□□ -1.88
SHOX2O60902 AC084036.1-201ENST00000609190 508 ntBASIC3.33□□□□□ -1.88
SHOX2O60902 AL591516.1-201ENST00000611326 274 ntBASIC3.33□□□□□ -1.88
SHOX2O60902 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
SHOX2O60902 AC039056.2-201ENST00000622261 511 ntBASIC3.33□□□□□ -1.88
SHOX2O60902 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.33□□□□□ -1.88
SHOX2O60902 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.33□□□□□ -1.88
SHOX2O60902 SEPT7P7-201ENST00000420492 1301 ntBASIC3.33□□□□□ -1.88
SHOX2O60902 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.33□□□□□ -1.88
SHOX2O60902 AC022031.1-201ENST00000585985 2593 ntBASIC3.33□□□□□ -1.88
SHOX2O60902 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.33□□□□□ -1.88
SHOX2O60902 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SHOX2O60902 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SHOX2O60902 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SHOX2O60902 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.32□□□□□ -1.88
SHOX2O60902 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.32□□□□□ -1.88
SHOX2O60902 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SHOX2O60902 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.32□□□□□ -1.88
SHOX2O60902 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SHOX2O60902 RPL23AP57-201ENST00000332361 466 ntBASIC3.32□□□□□ -1.88
SHOX2O60902 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
SHOX2O60902 AL031121.1-201ENST00000406553 254 ntBASIC3.32□□□□□ -1.88
SHOX2O60902 RPS3AP25-201ENST00000411660 793 ntBASIC3.32□□□□□ -1.88
SHOX2O60902 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SHOX2O60902 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.32□□□□□ -1.88
SHOX2O60902 RPS12P18-201ENST00000442381 270 ntBASIC3.32□□□□□ -1.88
SHOX2O60902 GAPDHP36-201ENST00000480688 918 ntBASIC3.32□□□□□ -1.88
SHOX2O60902 AC112198.1-201ENST00000505369 1220 ntBASIC3.32□□□□□ -1.88
SHOX2O60902 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.32□□□□□ -1.88
SHOX2O60902 AC110792.2-201ENST00000510278 224 ntBASIC3.32□□□□□ -1.88
SHOX2O60902 AC008676.3-201ENST00000521237 435 ntBASIC3.32□□□□□ -1.88
SHOX2O60902 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.32□□□□□ -1.88
SHOX2O60902 AC005476.1-201ENST00000554427 397 ntBASIC3.32□□□□□ -1.88
SHOX2O60902 EIF1AXP2-201ENST00000555940 413 ntBASIC3.32□□□□□ -1.88
SHOX2O60902 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC3.32□□□□□ -1.88
SHOX2O60902 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.32□□□□□ -1.88
SHOX2O60902 AC104984.5-201ENST00000586878 94 ntBASIC3.32□□□□□ -1.88
SHOX2O60902 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.32□□□□□ -1.88
SHOX2O60902 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SHOX2O60902 AL392112.1-201ENST00000605115 829 ntBASIC3.32□□□□□ -1.88
SHOX2O60902 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.32□□□□□ -1.88
SHOX2O60902 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SHOX2O60902 AC019176.2-201ENST00000611579 315 ntBASIC3.32□□□□□ -1.88
SHOX2O60902 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SHOX2O60902 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SHOX2O60902 AL354798.1-201ENST00000622505 329 ntBASIC3.32□□□□□ -1.88
SHOX2O60902 AC073348.1-201ENST00000623002 331 ntBASIC3.32□□□□□ -1.88
SHOX2O60902 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.32□□□□□ -1.88
SHOX2O60902 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SHOX2O60902 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
SHOX2O60902 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.32□□□□□ -1.88
SHOX2O60902 AL353746.1-201ENST00000566293 6881 ntBASIC3.31□□□□□ -1.88
SHOX2O60902 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SHOX2O60902 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SHOX2O60902 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.31□□□□□ -1.88
SHOX2O60902 AC233263.6-201ENST00000631132 1963 ntBASIC3.31□□□□□ -1.88
SHOX2O60902 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SHOX2O60902 CR383658.2-201ENST00000547576 1525 ntBASIC3.31□□□□□ -1.88
SHOX2O60902 AP004289.2-201ENST00000444413 1457 ntBASIC3.31□□□□□ -1.88
SHOX2O60902 AL049737.1-201ENST00000413920 1403 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms