Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.95□□□□□ -1.78
ZIC3O60481 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC3.95□□□□□ -1.78
ZIC3O60481 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
ZIC3O60481 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
ZIC3O60481 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
ZIC3O60481 ELL2P4-201ENST00000446870 1376 ntBASIC3.95□□□□□ -1.78
ZIC3O60481 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC3.95□□□□□ -1.78
ZIC3O60481 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
ZIC3O60481 RPL32P3-201ENST00000359025 275 ntBASIC3.95□□□□□ -1.78
ZIC3O60481 RNU6-462P-201ENST00000362659 105 ntBASIC3.95□□□□□ -1.78
ZIC3O60481 RNU1-132P-201ENST00000364300 164 ntBASIC3.95□□□□□ -1.78
ZIC3O60481 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
ZIC3O60481 HMGB1P17-201ENST00000403495 628 ntBASIC3.95□□□□□ -1.78
ZIC3O60481 RN7SKP167-201ENST00000411047 285 ntBASIC3.95□□□□□ -1.78
ZIC3O60481 EIF4A1P3-201ENST00000411521 244 ntBASIC3.95□□□□□ -1.78
ZIC3O60481 AC011933.1-201ENST00000413334 321 ntBASIC3.95□□□□□ -1.78
ZIC3O60481 RPL21P108-201ENST00000413857 481 ntBASIC3.95□□□□□ -1.78
ZIC3O60481 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC3.95□□□□□ -1.78
ZIC3O60481 C4BPAP2-201ENST00000428434 478 ntBASIC3.95□□□□□ -1.78
ZIC3O60481 OR4F13P-201ENST00000428478 931 ntBASIC3.95□□□□□ -1.78
ZIC3O60481 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.95□□□□□ -1.78
ZIC3O60481 RPEP2-201ENST00000432149 701 ntBASIC3.95□□□□□ -1.78
ZIC3O60481 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.95□□□□□ -1.78
ZIC3O60481 LARP1BP3-201ENST00000437229 869 ntBASIC3.95□□□□□ -1.78
ZIC3O60481 RPL23AP52-201ENST00000439311 478 ntBASIC3.95□□□□□ -1.78
ZIC3O60481 MTND1P30-201ENST00000441241 901 ntBASIC3.95□□□□□ -1.78
ZIC3O60481 AL357520.1-201ENST00000441557 453 ntBASIC3.95□□□□□ -1.78
ZIC3O60481 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.95□□□□□ -1.78
ZIC3O60481 TRBV26-201ENST00000456572 344 ntBASIC3.95□□□□□ -1.78
ZIC3O60481 AC116533.1-201ENST00000459748 321 ntBASIC3.95□□□□□ -1.78
ZIC3O60481 RPL30P9-201ENST00000465586 330 ntBASIC3.95□□□□□ -1.78
ZIC3O60481 RPS23P7-201ENST00000466210 444 ntBASIC3.95□□□□□ -1.78
ZIC3O60481 RPL35AP15-201ENST00000468042 339 ntBASIC3.95□□□□□ -1.78
ZIC3O60481 RPS15AP17-201ENST00000470598 390 ntBASIC3.95□□□□□ -1.78
ZIC3O60481 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.95□□□□□ -1.78
ZIC3O60481 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.95□□□□□ -1.78
ZIC3O60481 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.95□□□□□ -1.78
ZIC3O60481 AC026412.2-201ENST00000512270 1075 ntBASIC3.95□□□□□ -1.78
ZIC3O60481 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.95□□□□□ -1.78
ZIC3O60481 AC104986.1-201ENST00000517978 436 ntBASIC3.95□□□□□ -1.78
ZIC3O60481 RPL12P22-201ENST00000519073 490 ntBASIC3.95□□□□□ -1.78
ZIC3O60481 AC090151.1-201ENST00000520784 730 ntBASIC3.95□□□□□ -1.78
ZIC3O60481 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.95□□□□□ -1.78
ZIC3O60481 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.95□□□□□ -1.78
ZIC3O60481 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
ZIC3O60481 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
ZIC3O60481 AC023161.2-201ENST00000551218 780 ntBASIC3.95□□□□□ -1.78
ZIC3O60481 HSPE1P3-201ENST00000559254 309 ntBASIC3.95□□□□□ -1.78
ZIC3O60481 AC084757.1-201ENST00000559987 490 ntBASIC3.95□□□□□ -1.78
ZIC3O60481 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
ZIC3O60481 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.95□□□□□ -1.78
ZIC3O60481 AC113194.1-201ENST00000606037 500 ntBASIC3.95□□□□□ -1.78
ZIC3O60481 Z98200.1-201ENST00000607298 470 ntBASIC3.95□□□□□ -1.78
ZIC3O60481 AC091979.2-201ENST00000607514 214 ntBASIC3.95□□□□□ -1.78
ZIC3O60481 AC083809.1-201ENST00000615051 472 ntBASIC3.95□□□□□ -1.78
ZIC3O60481 MLECP1-201ENST00000615893 709 ntBASIC3.95□□□□□ -1.78
ZIC3O60481 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC3.95□□□□□ -1.78
ZIC3O60481 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.95□□□□□ -1.78
ZIC3O60481 AL356266.1-201ENST00000623311 483 ntBASIC3.95□□□□□ -1.78
ZIC3O60481 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.95□□□□□ -1.78
ZIC3O60481 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
ZIC3O60481 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
ZIC3O60481 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
ZIC3O60481 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
ZIC3O60481 SUPT16HP1-201ENST00000537175 3133 ntBASIC3.95□□□□□ -1.78
ZIC3O60481 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
ZIC3O60481 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
ZIC3O60481 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC3.94□□□□□ -1.78
ZIC3O60481 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
ZIC3O60481 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
ZIC3O60481 NEAT1-202ENST00000501122 22743 ntBASIC3.94□□□□□ -1.78
ZIC3O60481 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
ZIC3O60481 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
ZIC3O60481 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
ZIC3O60481 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
ZIC3O60481 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
ZIC3O60481 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
ZIC3O60481 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC3.94□□□□□ -1.78
ZIC3O60481 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.94□□□□□ -1.78
ZIC3O60481 RNU6-723P-201ENST00000383973 107 ntBASIC3.94□□□□□ -1.78
ZIC3O60481 RNU1-44P-201ENST00000384453 163 ntBASIC3.94□□□□□ -1.78
ZIC3O60481 SNORD116-4-201ENST00000384733 96 ntBASIC3.94□□□□□ -1.78
ZIC3O60481 AC007066.1-201ENST00000392902 381 ntBASIC3.94□□□□□ -1.78
ZIC3O60481 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
ZIC3O60481 AC097374.1-203ENST00000400783 485 ntBASIC3.94□□□□□ -1.78
ZIC3O60481 AC069218.2-201ENST00000411665 344 ntBASIC3.94□□□□□ -1.78
ZIC3O60481 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC3.94□□□□□ -1.78
ZIC3O60481 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC3.94□□□□□ -1.78
ZIC3O60481 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.94□□□□□ -1.78
ZIC3O60481 COX6CP17-201ENST00000421389 185 ntBASIC3.94□□□□□ -1.78
ZIC3O60481 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.94□□□□□ -1.78
ZIC3O60481 AL132765.1-201ENST00000434165 553 ntBASIC3.94□□□□□ -1.78
ZIC3O60481 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.94□□□□□ -1.78
ZIC3O60481 AL117351.1-201ENST00000438864 766 ntBASIC3.94□□□□□ -1.78
ZIC3O60481 TRIM60P18-201ENST00000441518 828 ntBASIC3.94□□□□□ -1.78
ZIC3O60481 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.94□□□□□ -1.78
ZIC3O60481 AC104073.1-201ENST00000451988 151 ntBASIC3.94□□□□□ -1.78
ZIC3O60481 HMGB3P21-201ENST00000452483 547 ntBASIC3.94□□□□□ -1.78
ZIC3O60481 RPS20P21-201ENST00000466859 343 ntBASIC3.94□□□□□ -1.78
ZIC3O60481 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms