Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AC008571.1-201ENST00000467232 300 ntBASIC2.36□□□□□ -2.03
SSSCA1O60232 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC2.36□□□□□ -2.03
SSSCA1O60232 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC2.36□□□□□ -2.03
SSSCA1O60232 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC2.36□□□□□ -2.03
SSSCA1O60232 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC2.36□□□□□ -2.03
SSSCA1O60232 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.36□□□□□ -2.03
SSSCA1O60232 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.36□□□□□ -2.03
SSSCA1O60232 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC2.36□□□□□ -2.03
SSSCA1O60232 AL627309.6-201ENST00000606857 840 ntBASIC2.36□□□□□ -2.03
SSSCA1O60232 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.36□□□□□ -2.03
SSSCA1O60232 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.36□□□□□ -2.03
SSSCA1O60232 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
SSSCA1O60232 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
SSSCA1O60232 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.35□□□□□ -2.03
SSSCA1O60232 CDY3P-201ENST00000454543 1618 ntBASIC2.35□□□□□ -2.03
SSSCA1O60232 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.35□□□□□ -2.03
SSSCA1O60232 AC110792.3-201ENST00000595906 1614 ntBASIC2.35□□□□□ -2.03
SSSCA1O60232 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.35□□□□□ -2.03
SSSCA1O60232 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
SSSCA1O60232 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
SSSCA1O60232 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
SSSCA1O60232 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
SSSCA1O60232 MIR22-201ENST00000362190 85 ntBASIC2.35□□□□□ -2.03
SSSCA1O60232 RNU6-1331P-201ENST00000363658 106 ntBASIC2.35□□□□□ -2.03
SSSCA1O60232 MIR490-201ENST00000384865 128 ntBASIC2.35□□□□□ -2.03
SSSCA1O60232 MIR141-201ENST00000384975 95 ntBASIC2.35□□□□□ -2.03
SSSCA1O60232 SNORA26.7-201ENST00000391288 122 ntBASIC2.35□□□□□ -2.03
SSSCA1O60232 RNU2-65P-201ENST00000410162 185 ntBASIC2.35□□□□□ -2.03
SSSCA1O60232 RPL7P8-201ENST00000411964 730 ntBASIC2.35□□□□□ -2.03
SSSCA1O60232 AC245052.5-201ENST00000416320 649 ntBASIC2.35□□□□□ -2.03
SSSCA1O60232 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC2.35□□□□□ -2.03
SSSCA1O60232 HSPE1P1-201ENST00000421494 318 ntBASIC2.35□□□□□ -2.03
SSSCA1O60232 RPL36AP6-201ENST00000435770 321 ntBASIC2.35□□□□□ -2.03
SSSCA1O60232 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.35□□□□□ -2.03
SSSCA1O60232 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC2.35□□□□□ -2.03
SSSCA1O60232 SSXP4-201ENST00000451349 245 ntBASIC2.35□□□□□ -2.03
SSSCA1O60232 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.35□□□□□ -2.03
SSSCA1O60232 OR7L1P-201ENST00000456181 380 ntBASIC2.35□□□□□ -2.03
SSSCA1O60232 HMGN2P16-201ENST00000456802 261 ntBASIC2.35□□□□□ -2.03
SSSCA1O60232 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
SSSCA1O60232 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.35□□□□□ -2.03
SSSCA1O60232 AC109925.1-201ENST00000478069 331 ntBASIC2.35□□□□□ -2.03
SSSCA1O60232 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC2.35□□□□□ -2.03
SSSCA1O60232 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC2.35□□□□□ -2.03
SSSCA1O60232 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
SSSCA1O60232 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
SSSCA1O60232 SNORA9.3-201ENST00000516383 129 ntBASIC2.35□□□□□ -2.03
SSSCA1O60232 RNU6-56P-201ENST00000516986 93 ntBASIC2.35□□□□□ -2.03
SSSCA1O60232 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC2.35□□□□□ -2.03
SSSCA1O60232 TRMT10BP1-201ENST00000519377 943 ntBASIC2.35□□□□□ -2.03
SSSCA1O60232 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC2.35□□□□□ -2.03
SSSCA1O60232 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC2.35□□□□□ -2.03
SSSCA1O60232 AC078899.3-201ENST00000599065 212 ntBASIC2.35□□□□□ -2.03
SSSCA1O60232 VN1R85P-201ENST00000601587 426 ntBASIC2.35□□□□□ -2.03
SSSCA1O60232 RNA5SP108-201ENST00000605921 117 ntBASIC2.35□□□□□ -2.03
SSSCA1O60232 AC090115.4-201ENST00000609970 188 ntBASIC2.35□□□□□ -2.03
SSSCA1O60232 AC105429.2-201ENST00000610567 517 ntBASIC2.35□□□□□ -2.03
SSSCA1O60232 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
SSSCA1O60232 AP003072.4-201ENST00000624580 310 ntBASIC2.35□□□□□ -2.03
SSSCA1O60232 FRG1DP-201ENST00000635586 771 ntBASIC2.35□□□□□ -2.03
SSSCA1O60232 MIR622-201ENST00000638396 96 ntBASIC2.35□□□□□ -2.03
SSSCA1O60232 METTL8-218ENST00000638989 876 ntTSL 5 BASIC2.35□□□□□ -2.03
SSSCA1O60232 METTL8-219ENST00000640734 726 ntTSL 2 BASIC2.35□□□□□ -2.03
SSSCA1O60232 AC139713.2-210ENST00000641741 992 ntBASIC2.35□□□□□ -2.03
SSSCA1O60232 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
SSSCA1O60232 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC2.35□□□□□ -2.03
SSSCA1O60232 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
SSSCA1O60232 MTND4P34-201ENST00000572715 1371 ntBASIC2.35□□□□□ -2.03
SSSCA1O60232 AL035425.3-201ENST00000564206 4996 ntBASIC2.34□□□□□ -2.03
SSSCA1O60232 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.34□□□□□ -2.03
SSSCA1O60232 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.34□□□□□ -2.03
SSSCA1O60232 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
SSSCA1O60232 AC234772.1-201ENST00000377927 937 ntBASIC2.34□□□□□ -2.03
SSSCA1O60232 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC2.34□□□□□ -2.03
SSSCA1O60232 CCNB2P1-201ENST00000399411 1150 ntBASIC2.34□□□□□ -2.03
SSSCA1O60232 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.34□□□□□ -2.03
SSSCA1O60232 RPL31P2-201ENST00000413849 377 ntBASIC2.34□□□□□ -2.03
SSSCA1O60232 AC004987.3-201ENST00000413879 771 ntBASIC2.34□□□□□ -2.03
SSSCA1O60232 SSXP9-201ENST00000417503 292 ntBASIC2.34□□□□□ -2.03
SSSCA1O60232 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC2.34□□□□□ -2.03
SSSCA1O60232 AL445528.1-201ENST00000426330 420 ntBASIC2.34□□□□□ -2.03
SSSCA1O60232 HMGB1P12-201ENST00000438594 598 ntBASIC2.34□□□□□ -2.03
SSSCA1O60232 MTCYBP21-201ENST00000443300 1113 ntBASIC2.34□□□□□ -2.03
SSSCA1O60232 AL353898.1-201ENST00000444055 238 ntBASIC2.34□□□□□ -2.03
SSSCA1O60232 MRPL50P4-201ENST00000446432 475 ntBASIC2.34□□□□□ -2.03
SSSCA1O60232 AC008155.2-201ENST00000464337 397 ntBASIC2.34□□□□□ -2.03
SSSCA1O60232 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC2.34□□□□□ -2.03
SSSCA1O60232 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
SSSCA1O60232 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC2.34□□□□□ -2.03
SSSCA1O60232 PAICSP4-201ENST00000517543 1253 ntBASIC2.34□□□□□ -2.03
SSSCA1O60232 SEC11B-201ENST00000518383 499 ntBASIC2.34□□□□□ -2.03
SSSCA1O60232 AC026403.1-201ENST00000518938 295 ntBASIC2.34□□□□□ -2.03
SSSCA1O60232 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.34□□□□□ -2.03
SSSCA1O60232 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC2.34□□□□□ -2.03
SSSCA1O60232 AL133271.1-201ENST00000538229 291 ntBASIC2.34□□□□□ -2.03
SSSCA1O60232 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.34□□□□□ -2.03
SSSCA1O60232 NCAPGP2-201ENST00000557911 754 ntBASIC2.34□□□□□ -2.03
SSSCA1O60232 AC015871.2-201ENST00000603605 948 ntBASIC2.34□□□□□ -2.03
SSSCA1O60232 AC091953.5-201ENST00000622919 233 ntBASIC2.34□□□□□ -2.03
SSSCA1O60232 AC018692.3-201ENST00000623929 123 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms