Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 ELOCP16-201ENST00000444494 332 ntBASIC2.6□□□□□ -1.99
SDCBPO00560 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.6□□□□□ -1.99
SDCBPO00560 VN1R34P-201ENST00000447387 883 ntBASIC2.6□□□□□ -1.99
SDCBPO00560 ELOCP23-201ENST00000452014 332 ntBASIC2.6□□□□□ -1.99
SDCBPO00560 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.6□□□□□ -1.99
SDCBPO00560 RPL37P6-202ENST00000464216 403 ntBASIC2.6□□□□□ -1.99
SDCBPO00560 AP004217.1-201ENST00000480579 346 ntBASIC2.6□□□□□ -1.99
SDCBPO00560 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC2.6□□□□□ -1.99
SDCBPO00560 RN7SL20P-201ENST00000488827 297 ntBASIC2.6□□□□□ -1.99
SDCBPO00560 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC2.6□□□□□ -1.99
SDCBPO00560 AC025857.1-201ENST00000525252 377 ntBASIC2.6□□□□□ -1.99
SDCBPO00560 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC2.6□□□□□ -1.99
SDCBPO00560 RPL21P12-201ENST00000559810 515 ntBASIC2.6□□□□□ -1.99
SDCBPO00560 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.6□□□□□ -1.99
SDCBPO00560 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC2.6□□□□□ -1.99
SDCBPO00560 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC2.6□□□□□ -1.99
SDCBPO00560 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.6□□□□□ -1.99
SDCBPO00560 AC006065.5-201ENST00000623427 349 ntBASIC2.6□□□□□ -1.99
SDCBPO00560 AC019080.5-201ENST00000624891 757 ntBASIC2.6□□□□□ -1.99
SDCBPO00560 U6.105-201ENST00000637379 88 ntBASIC2.6□□□□□ -1.99
SDCBPO00560 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
SDCBPO00560 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC2.6□□□□□ -1.99
SDCBPO00560 AC024341.1-201ENST00000526444 1552 ntBASIC2.6□□□□□ -1.99
SDCBPO00560 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.6□□□□□ -1.99
SDCBPO00560 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
SDCBPO00560 AC025125.1-201ENST00000624743 1922 ntBASIC2.6□□□□□ -1.99
SDCBPO00560 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.6□□□□□ -1.99
SDCBPO00560 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC2.6□□□□□ -1.99
SDCBPO00560 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
SDCBPO00560 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
SDCBPO00560 CNOT6LP1-201ENST00000559681 1462 ntBASIC2.59□□□□□ -1.99
SDCBPO00560 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
SDCBPO00560 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
SDCBPO00560 AL672296.1-201ENST00000427780 2158 ntBASIC2.59□□□□□ -1.99
SDCBPO00560 RNU6-666P-201ENST00000363499 107 ntBASIC2.59□□□□□ -1.99
SDCBPO00560 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.59□□□□□ -1.99
SDCBPO00560 MIR7-3-201ENST00000384898 110 ntBASIC2.59□□□□□ -1.99
SDCBPO00560 MIR183-201ENST00000384958 110 ntBASIC2.59□□□□□ -1.99
SDCBPO00560 AL357075.1-201ENST00000404107 726 ntBASIC2.59□□□□□ -1.99
SDCBPO00560 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.59□□□□□ -1.99
SDCBPO00560 TRIAP1P1-201ENST00000427062 225 ntBASIC2.59□□□□□ -1.99
SDCBPO00560 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
SDCBPO00560 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC2.59□□□□□ -1.99
SDCBPO00560 CYCSP43-201ENST00000438233 310 ntBASIC2.59□□□□□ -1.99
SDCBPO00560 AC006028.1-201ENST00000438379 402 ntBASIC2.59□□□□□ -1.99
SDCBPO00560 PRSS3P4-201ENST00000453323 162 ntBASIC2.59□□□□□ -1.99
SDCBPO00560 NDUFAF4P3-201ENST00000456468 525 ntBASIC2.59□□□□□ -1.99
SDCBPO00560 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC2.59□□□□□ -1.99
SDCBPO00560 RPL21P41-201ENST00000459863 264 ntBASIC2.59□□□□□ -1.99
SDCBPO00560 AL672167.3-201ENST00000465951 960 ntBASIC2.59□□□□□ -1.99
SDCBPO00560 RPL21P103-201ENST00000479921 488 ntBASIC2.59□□□□□ -1.99
SDCBPO00560 RN7SL633P-201ENST00000488974 297 ntBASIC2.59□□□□□ -1.99
SDCBPO00560 RPL5P23-201ENST00000496040 868 ntBASIC2.59□□□□□ -1.99
SDCBPO00560 WBP1LP4-201ENST00000505043 344 ntBASIC2.59□□□□□ -1.99
SDCBPO00560 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
SDCBPO00560 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC2.59□□□□□ -1.99
SDCBPO00560 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC2.59□□□□□ -1.99
SDCBPO00560 RNA5SP385-201ENST00000515947 110 ntBASIC2.59□□□□□ -1.99
SDCBPO00560 AC067904.2-201ENST00000517322 1283 ntBASIC2.59□□□□□ -1.99
SDCBPO00560 SEC11B-201ENST00000518383 499 ntBASIC2.59□□□□□ -1.99
SDCBPO00560 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC2.59□□□□□ -1.99
SDCBPO00560 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC2.59□□□□□ -1.99
SDCBPO00560 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.59□□□□□ -1.99
SDCBPO00560 PTP4A1P6-201ENST00000531034 478 ntBASIC2.59□□□□□ -1.99
SDCBPO00560 AP000619.3-201ENST00000535634 1127 ntBASIC2.59□□□□□ -1.99
SDCBPO00560 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC2.59□□□□□ -1.99
SDCBPO00560 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.59□□□□□ -1.99
SDCBPO00560 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.59□□□□□ -1.99
SDCBPO00560 AC006116.7-201ENST00000590141 756 ntBASIC2.59□□□□□ -1.99
SDCBPO00560 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC2.59□□□□□ -1.99
SDCBPO00560 LLPHP1-201ENST00000603571 367 ntBASIC2.59□□□□□ -1.99
SDCBPO00560 PRELID3BP8-201ENST00000604148 295 ntBASIC2.59□□□□□ -1.99
SDCBPO00560 AC138473.1-201ENST00000605717 526 ntBASIC2.59□□□□□ -1.99
SDCBPO00560 AC105429.2-201ENST00000610567 517 ntBASIC2.59□□□□□ -1.99
SDCBPO00560 AC100793.4-201ENST00000613683 429 ntBASIC2.59□□□□□ -1.99
SDCBPO00560 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
SDCBPO00560 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC2.59□□□□□ -1.99
SDCBPO00560 AC012314.7-201ENST00000619693 93 ntBASIC2.59□□□□□ -1.99
SDCBPO00560 PLCE1P1-201ENST00000622094 305 ntBASIC2.59□□□□□ -1.99
SDCBPO00560 AC048347.1-201ENST00000624621 427 ntBASIC2.59□□□□□ -1.99
SDCBPO00560 CR392039.4-201ENST00000624968 501 ntBASIC2.59□□□□□ -1.99
SDCBPO00560 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.59□□□□□ -2
SDCBPO00560 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.59□□□□□ -2
SDCBPO00560 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
SDCBPO00560 AL161431.1-201ENST00000618966 4205 ntBASIC2.59□□□□□ -2
SDCBPO00560 GTF2H2B-203ENST00000508065 1432 ntBASIC2.59□□□□□ -2
SDCBPO00560 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.59□□□□□ -2
SDCBPO00560 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SDCBPO00560 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.58□□□□□ -2
SDCBPO00560 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.58□□□□□ -2
SDCBPO00560 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.58□□□□□ -2
SDCBPO00560 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.58□□□□□ -2
SDCBPO00560 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC2.58□□□□□ -2
SDCBPO00560 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.58□□□□□ -2
SDCBPO00560 AL353678.1-201ENST00000422735 741 ntBASIC2.58□□□□□ -2
SDCBPO00560 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC2.58□□□□□ -2
SDCBPO00560 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC2.58□□□□□ -2
SDCBPO00560 TRIM60P3Y-201ENST00000432201 673 ntBASIC2.58□□□□□ -2
SDCBPO00560 AC011242.1-201ENST00000433596 1158 ntBASIC2.58□□□□□ -2
SDCBPO00560 HSD52-202ENST00000436225 772 ntTSL 3 BASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 183.5 ms